RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 URGCPQ8TCY9 931 aa17.98■□□□□ 0.47
CDKN1A-201ENST00000244741 TOP1MTQ969P6 601 aa17.98■□□□□ 0.47
CDKN1A-201ENST00000244741 SLC38A7Q9NVC3 462 aa17.98■□□□□ 0.47
CDKN1A-201ENST00000244741 AMACRQ9UHK6 382 aa17.98■□□□□ 0.47
CDKN1A-201ENST00000244741 LTBP2Q14767 1821 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 CD58P19256 250 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 HSPA9P38646 679 aaKnown RBP17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 USP8P40818 1118 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 CDH8P55286 799 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 GRIK3Q13003 919 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 CUL1Q13616 776 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 SH2D3CQ8N5H7 860 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 EIF1ADQ8N9N8 165 aaKnown RBP17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 LCMT1Q9UIC8 334 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 TTC7AQ9ULT0 858 aaPredicted RBP17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 NR2E1Q9Y466 385 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 I3L4J1 428 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 TULP2O00295 520 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 PODXLO00592 558 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 PIRO00625 290 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 XPOTO43592 962 aaKnown RBP17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 ZC3H11AO75152 810 aaKnown RBP eCLIP17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 CALCAP01258 141 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 FGGP02679 453 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 ITGB1P05556 798 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 DNAJC21Q5F1R6 531 aaKnown RBP17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 KCTD16Q68DU8 428 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.97■□□□□ 0.471e-7■□□□□ 11
CDKN1A-201ENST00000244741 CAPS2Q9BXY5 557 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 NEUROG2Q9H2A3 272 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 PRG3Q9Y2Y8 225 aaPredicted RBP17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 SNX9Q9Y5X1 595 aa17.97■□□□□ 0.47
CDKN1A-201ENST00000244741 CHD7Q9P2D1 2997 aa17.96■□□□□ 0.47
CDKN1A-201ENST00000244741 FTLP02792 175 aaPredicted RBP17.96■□□□□ 0.47
CDKN1A-201ENST00000244741 FAM193BQ96PV7 902 aaPredicted RBP17.96■□□□□ 0.47
CDKN1A-201ENST00000244741 SLITRK6Q9H5Y7 841 aa17.96■□□□□ 0.47
CDKN1A-201ENST00000244741 SMYD3Q9H7B4 428 aa17.96■□□□□ 0.47
CDKN1A-201ENST00000244741 ACP6Q9NPH0 428 aa17.96■□□□□ 0.47
CDKN1A-201ENST00000244741 NT5C1B-RDH14C9J2C7 533 aa17.96■□□□□ 0.46
CDKN1A-201ENST00000244741 TTI1O43156 1089 aa17.96■□□□□ 0.46
CDKN1A-201ENST00000244741 DGKIO75912 1065 aa17.96■□□□□ 0.46
CDKN1A-201ENST00000244741 B3GAT3O94766 335 aa17.96■□□□□ 0.46
CDKN1A-201ENST00000244741 CYP3A5P20815 502 aa17.96■□□□□ 0.46
CDKN1A-201ENST00000244741 OR1G1P47890 313 aa17.96■□□□□ 0.46
CDKN1A-201ENST00000244741 CDR1P51861 262 aa17.96■□□□□ 0.46
CDKN1A-201ENST00000244741 TUSC3Q13454 348 aa17.96■□□□□ 0.46
CDKN1A-201ENST00000244741 UPP1Q16831 310 aa17.96■□□□□ 0.46
CDKN1A-201ENST00000244741 ZNF667Q5HYK9 610 aa17.96■□□□□ 0.46
CDKN1A-201ENST00000244741 PCDHB18PQ96TA0 734 aa17.96■□□□□ 0.46
CDKN1A-201ENST00000244741 DAPK3O43293 454 aa17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 CAPN15O75808 1086 aa17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 MAGEA10P43363 369 aaPredicted RBP17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 ASPAP45381 313 aa17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 LILRA4P59901 499 aa17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 MYO1EQ12965 1108 aa17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 ORC1Q13415 861 aa17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 CUL2Q13617 745 aa17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 ZNF394Q53GI3 561 aa17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 C9orf50Q5SZB4 431 aa17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 NAA35Q5VZE5 725 aa17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 TTC19Q6DKK2 380 aaPredicted RBP17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 NRDE2Q9H7Z3 1164 aa17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 RSPH14Q9UHP6 348 aa17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 PLAAQ9Y263 795 aa17.95■□□□□ 0.46
CDKN1A-201ENST00000244741 BAIAP3O94812 1187 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 CHRNB2P17787 502 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 LRPAP1P30533 357 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 MAATS1Q7Z4T9 603 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 COLGALT2Q8IYK4 626 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 CCDC26Q8TAB7 109 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 NIF3L1Q9GZT8 377 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 SDCBP2Q9H190 292 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 ALG6Q9Y672 507 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 INPPL1O15357 1258 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 KRT5P13647 590 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 FLT3P36888 993 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 HSD17B3P37058 310 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 BRCC3P46736 316 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 MFAP3P55082 362 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 HADHBP55084 474 aaKnown RBP17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 GNGT1P63211 74 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 SKOR1P84550 965 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 ZNF211Q13398 564 aaPredicted RBP17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 UAP1Q16222 522 aaPredicted RBP17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 FNDC1Q4ZHG4 1894 aaPredicted RBP17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 PSRC1Q6PGN9 363 aaPredicted RBP17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 NOP9Q86U38 636 aaKnown RBP17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 RHOT2Q8IXI1 618 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 FAM71AQ8IYT1 594 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 ALG3Q92685 438 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 RNPC3Q96LT9 517 aaKnown RBP17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 CARD9Q9H257 536 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 CTTNBP2NLQ9P2B4 639 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 KANSL3Q9P2N6 904 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 CHORDC1Q9UHD1 332 aaPredicted RBP17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 NOCTQ9UK39 431 aaKnown RBP17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 TIMM13Q9Y5L4 95 aaPredicted RBP17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 NR2E3Q9Y5X4 410 aa17.94■□□□□ 0.46
CDKN1A-201ENST00000244741 PTPRSQ13332 1948 aa17.93■□□□□ 0.46
CDKN1A-201ENST00000244741 KPNA7A9QM74 516 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms