RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 TMEM143Q96AN5 459 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 FAM81BQ96LP2 452 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 SAE1Q9UBE0 346 aaPredicted RBP9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 ZNF148Q9UQR1 794 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 PLXNB2O15031 1838 aa9.88□□□□□ -0.83
HLA-DOA-201ENST00000229829 CFAP69A5D8W1 941 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 FAM47DPA6NHR8 397 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 F8VP50 259 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 MAP3K7O43318 606 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 RGS20O76081 388 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 ASMTLO95671 621 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 FGFR1P11362 822 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 RPA3P35244 121 aaPredicted RBP9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 LIG4P49917 911 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 KRT76Q01546 638 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 PTP4A2Q12974 167 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 NFX1Q12986 1120 aaKnown RBP9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 STAT4Q14765 748 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 MTERF2Q49AM1 385 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 RFWD3Q6PCD5 774 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 NLRX1Q86UT6 975 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 TRABD2AQ86V40 505 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 KATNAL2Q8IYT4 538 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 ABRAQ8N0Z2 381 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 OR5B17Q8NGF7 314 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 PHF12Q96QT6 1004 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 DENND2DQ9H6A0 471 aaPredicted RBP9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 ALG13Q9NP73 1137 aaKnown RBP9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 NUB1Q9Y5A7 615 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 MYH9P35579 1960 aaKnown RBP9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 LIASO43766 372 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 TBC1D12O60347 775 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 UNC5CO95185 931 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 EDN1P05305 212 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 SFNP31947 248 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 ARSEP51690 589 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 NOP14P78316 857 aaKnown RBP9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 BTKQ06187 659 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 ZNF252P-AS1Q0IIN9 211 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 STRN3Q13033 797 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 GPS1Q13098 491 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 CUL2Q13617 745 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 ZNF394Q53GI3 561 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 C1QTNF12Q5T7M4 302 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 ENOSF1Q7L5Y1 443 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 USP37Q86T82 979 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 LCA5Q86VQ0 697 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 ZCCHC9Q8N567 271 aaKnown RBP9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 CFAP61Q8NHU2 1237 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 JDP2Q8WYK2 163 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 POLR3FQ9H1D9 316 aaPredicted RBP9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 C12orf65Q9H3J6 166 aaKnown RBP9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 PDLIM7Q9NR12 457 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 CLIC5Q9NZA1 410 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 BLOC1S6Q9UL45 172 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 IVNS1ABPQ9Y6Y0 642 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 KIAA1217Q5T5P2 1943 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 COL11A1P12107 1806 aaPredicted RBP9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 PSTPIP1O43586 416 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 GARTP22102 1010 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 VHLP40337 213 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 OGDHQ02218 1023 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 SLC1A5Q15758 541 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 KHDC1Q4VXA5 237 aaKnown RBP9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 PLEKHA7Q6IQ23 1121 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 ANKMY2Q8IV38 441 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 RBBP8NLQ8NC74 664 aaPredicted RBP9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 HIPK4Q8NE63 616 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 CCDC77Q9BR77 488 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 TSPYL2Q9H2G4 693 aaPredicted RBP9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 TRABDQ9H4I3 376 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 PHTF1Q9UMS5 762 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 CHKBQ9Y259 395 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 CASP8AP2Q9UKL3 1982 aa9.87□□□□□ -0.83
HLA-DOA-201ENST00000229829 A6NJR5 290 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 WDR46O15213 610 aaKnown RBP9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 EXTL3O43909 919 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 IFNB1P01574 187 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 NR3C2P08235 984 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 HARSP12081 509 aaKnown RBP9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 KRT15P19012 456 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 GHRHRQ02643 423 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 MAP7Q14244 749 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 WDR72Q3MJ13 1102 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 MDH1BQ5I0G3 518 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 RNF43Q68DV7 783 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 SDCCAG8Q86SQ7 713 aaPredicted RBP9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 ZNF677Q86XU0 584 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 ZBED8Q8IZ13 594 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 ANKRD35Q8N283 1001 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 LARGE2Q8N3Y3 721 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 EXD1Q8NHP7 514 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 DENND1AQ8TEH3 1009 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 ATG4CQ96DT6 458 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 TMEM121Q9BTD3 319 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 VPS37BQ9H9H4 285 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 ARHGAP28Q9P2N2 729 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 ANKFY1Q9P2R3 1169 aa9.86□□□□□ -0.83
HLA-DOA-201ENST00000229829 AGO2Q9UKV8 859 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms