RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 KLHL23Q8NBE8 558 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 RMND5BQ96G75 393 aaPredicted RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 VPS50Q96JG6 964 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 DCUN1D5Q9BTE7 237 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 TIPINQ9BVW5 301 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 RPL26L1Q9UNX3 145 aaKnown RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 PPLO60437 1756 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 SPATA31A5Q5VU36 1347 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 SPATA31A7Q8IWB4 1347 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 SMIM31A0A1B0GVY4 71 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 KRR1Q13601 381 aaKnown RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 TSTA3Q13630 321 aaPredicted RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 AUHQ13825 339 aaKnown RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 MAPK6Q16659 721 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 PDPK2PQ6A1A2 396 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.36□□□□□ -0.112e-6■■■■■ 163.7
HCFC2-201ENST00000229330 KIAA0895Q8NCT3 520 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 TBC1D16Q8TBP0 767 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 TCP10LQ8TDR4 215 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 PAWRQ96IZ0 340 aaKnown RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 RIMS1Q86UR5 1692 aaKnown RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 TRPC5OSA6NMA1 111 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 CHN2P52757 468 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 UGP2Q16851 508 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 NLRP4Q96MN2 994 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 NR1H4Q96RI1 486 aaPredicted RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 GRIP2Q9C0E4 1043 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 POLR3FQ9H1D9 316 aaPredicted RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 DCDC2Q9UHG0 476 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 HADHAP40939 763 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 GCLCP48506 637 aaPredicted RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 KBTBD12Q3ZCT8 623 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 TMC5Q6UXY8 1006 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 ZBTB49Q6ZSB9 765 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 CLVS1Q8IUQ0 354 aaPredicted RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 TNIP2Q8NFZ5 429 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 NDNQ99608 321 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 SKIV2L2P42285 1042 aaKnown RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 GJC2Q5T442 439 aaPredicted RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 KAZALD1Q96I82 304 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 FRMD8P1Q9BZ68 369 aaPredicted RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 ATAD3AQ9NVI7 634 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 ARMCX1Q9P291 453 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 SLC12A6Q9UHW9 1150 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 TEKT2Q9UIF3 430 aa14.36□□□□□ -0.11
HCFC2-201ENST00000229330 CPSF3Q9UKF6 684 aaKnown RBP14.36□□□□□ -0.11
HCFC2-201ENST00000229330 TBC1D12O60347 775 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 POLBP06746 335 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 C4orf22Q6V702 233 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 SLC26A11Q86WA9 606 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 SH3GL1Q99961 368 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 RUBCNLQ9H714 662 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 IL1RL2Q9HB29 575 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 HNRNPRO43390 633 aaKnown RBP14.35□□□□□ -0.11
HCFC2-201ENST00000229330 KRT36O76013 467 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 ZBTB7AO95365 584 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 BCL10O95999 233 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 KCNA2P16389 499 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 STIP1P31948 543 aaKnown RBP14.35□□□□□ -0.11
HCFC2-201ENST00000229330 KCNA1Q09470 495 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 DUOXA2Q1HG44 320 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 EFHC2Q5JST6 749 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 LENG1Q96BZ8 264 aaPredicted RBP14.35□□□□□ -0.11
HCFC2-201ENST00000229330 AGPAT3Q9NRZ7 376 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 STAP1Q9ULZ2 295 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 CAB39Q9Y376 341 aaPredicted RBP14.35□□□□□ -0.11
HCFC2-201ENST00000229330 NUDT17P0C025 328 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 ZNF543Q08ER8 600 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 DMC1Q14565 340 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 INAQ16352 499 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 PKN2Q16513 984 aaKnown RBP14.35□□□□□ -0.11
HCFC2-201ENST00000229330 SMTNL2Q2TAL5 461 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 HOMEZQ8IX15 550 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 CRAMP1Q96RY5 1269 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.35□□□□□ -0.11
HCFC2-201ENST00000229330 KIAA0391O15091 583 aaKnown RBP14.35□□□□□ -0.11
HCFC2-201ENST00000229330 PDGFRAP16234 1089 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 BLMHQ13867 455 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 CCDC80Q76M96 950 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 EEPD1Q7L9B9 569 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 CCDC60Q8IWA6 550 aaPredicted RBP14.35□□□□□ -0.11
HCFC2-201ENST00000229330 LRMDAQ9H2I8 198 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 MAD2L2Q9UI95 211 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 MYRFQ9Y2G1 1151 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 NEURL4Q96JN8 1562 aa14.35□□□□□ -0.11
HCFC2-201ENST00000229330 C1orf232A0A0U1RR37 186 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 MEI4A8MW99 385 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 SLC37A4O43826 429 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 IREB2P48200 963 aaKnown RBP14.34□□□□□ -0.11
HCFC2-201ENST00000229330 ZNF568Q3ZCX4 644 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 TCHHL1Q5QJ38 904 aaPredicted RBP14.34□□□□□ -0.11
HCFC2-201ENST00000229330 KCTD17Q8N5Z5 321 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 ZNF280CQ8ND82 737 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 HLA-DPA1P20036 260 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 YWHABP31946 246 aaKnown RBP14.34□□□□□ -0.11
HCFC2-201ENST00000229330 SOX11P35716 441 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 CASP4P49662 377 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 PARP6Q2NL67 630 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 CLIC5Q9NZA1 410 aa14.34□□□□□ -0.11
HCFC2-201ENST00000229330 GABBR1Q9UBS5 961 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms