RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 HELQQ8TDG4 1101 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 TMEM176AQ96HP8 235 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 ZIC5Q96T25 663 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 CYP3A43Q9HB55 503 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 FNDC3AQ9Y2H6 1198 aaKnown RBP9.87□□□□□ -0.83
CCDC113-201ENST00000219299 MYH1P12882 1939 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 XPAP23025 273 aaPredicted RBP9.87□□□□□ -0.83
CCDC113-201ENST00000219299 ARL2P36404 184 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 PLTPP55058 493 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 PRPSAP1Q14558 356 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 NAA30Q147X3 362 aaPredicted RBP9.87□□□□□ -0.83
CCDC113-201ENST00000219299 FIGNQ5HY92 759 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 DNAAF5Q86Y56 855 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 SH3GL3Q99963 347 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 KCNF1Q9H3M0 494 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 ARHGAP28Q9P2N2 729 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 UVRAGQ9P2Y5 699 aa9.87□□□□□ -0.83
CCDC113-201ENST00000219299 IPO11Q9UI26 975 aaKnown RBP9.87□□□□□ -0.83
CCDC113-201ENST00000219299 A0A0B4J269 797 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 SLC4A1P02730 911 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 SRGAP2BP0DMP2 458 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 NCAM1P13591 858 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 LHX1P48742 406 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 NFE2Q16621 373 aaPredicted RBP9.86□□□□□ -0.83
CCDC113-201ENST00000219299 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.86□□□□□ -0.83
CCDC113-201ENST00000219299 ZNF677Q86XU0 584 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 ARHGEF19Q8IW93 802 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 SENP8Q96LD8 212 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 HTATIP2Q9BUP3 242 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 KIAA1257Q9ULG3 409 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.86□□□□□ -0.83
CCDC113-201ENST00000219299 RASGRF2O14827 1237 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 ATP5HO75947 161 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 KRT10P13645 584 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 GGCXP38435 758 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 ADCY2Q08462 1091 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 MDH1BQ5I0G3 518 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 SLC9A9Q8IVB4 645 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 SLC20A1Q8WUM9 679 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 SYN2Q92777 582 aaPredicted RBP9.86□□□□□ -0.83
CCDC113-201ENST00000219299 SYT15Q9BQS2 421 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 FTHL17Q9BXU8 183 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 MRPL9Q9BYD2 267 aaKnown RBP9.86□□□□□ -0.83
CCDC113-201ENST00000219299 DONSONQ9NYP3 566 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.86□□□□□ -0.83
CCDC113-201ENST00000219299 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.86□□□□□ -0.83
CCDC113-201ENST00000219299 PAPPAQ13219 1627 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 PODXLO00592 558 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 TAP1Q03518 808 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 TLE2Q04725 743 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 PCBP1Q15365 356 aaKnown RBP eCLIP9.86□□□□□ -0.83
CCDC113-201ENST00000219299 OTOP2Q7RTS6 562 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 ZNF606Q8WXB4 792 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 ZFP42Q96MM3 310 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 TRIM62Q9BVG3 475 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 DRC3Q9H069 523 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 YY1AP1Q9H869 796 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 TJP2Q9UDY2 1190 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 PGAP2Q9UHJ9 254 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 ADAMTS5Q9UNA0 930 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 ANO9A1A5B4 782 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 LRRC10BA6NIK2 292 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 SH3BP5O60239 455 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 C22orf31O95567 290 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 SELPP16109 830 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 ACADSBP45954 432 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 SULT1E1P49888 294 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 CTU1Q7Z7A3 348 aaKnown RBP9.86□□□□□ -0.83
CCDC113-201ENST00000219299 NT5DC4Q86YG4 428 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 PARP9Q8IXQ6 854 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 USP38Q8NB14 1042 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 SLC7A14Q8TBB6 771 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 CALR3Q96L12 384 aaKnown RBP9.86□□□□□ -0.83
CCDC113-201ENST00000219299 THAP2Q9H0W7 228 aa9.86□□□□□ -0.83
CCDC113-201ENST00000219299 BARX2Q9UMQ3 279 aaPredicted RBP9.86□□□□□ -0.83
CCDC113-201ENST00000219299 NOC2LQ9Y3T9 749 aaKnown RBP9.86□□□□□ -0.83
CCDC113-201ENST00000219299 STK25O00506 426 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 MAPK13O15264 365 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 RGS20O76081 388 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 TMED1Q13445 227 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 BZW1Q7L1Q6 419 aaKnown RBP9.85□□□□□ -0.83
CCDC113-201ENST00000219299 WDR24Q96S15 920 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 YIPF3Q9GZM5 350 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 DSEQ9UL01 958 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 NT5C1B-RDH14C9J2C7 533 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 LRG1P02750 347 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 CTCFP49711 727 aaPredicted RBP9.85□□□□□ -0.83
CCDC113-201ENST00000219299 IRX1P78414 480 aaPredicted RBP9.85□□□□□ -0.83
CCDC113-201ENST00000219299 PHEXP78562 749 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 DEUP1Q05D60 604 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 BMT2Q1RMZ1 405 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 LRRC8DQ7L1W4 858 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 MIB1Q86YT6 1006 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 DBF4BQ8NFT6 615 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 RIN2Q8WYP3 895 aaPredicted RBP9.85□□□□□ -0.83
CCDC113-201ENST00000219299 ZMAT2Q96NC0 199 aaKnown RBP9.85□□□□□ -0.83
CCDC113-201ENST00000219299 CYP4F11Q9HBI6 524 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 ACP6Q9NPH0 428 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 ARHGAP20Q9P2F6 1191 aa9.85□□□□□ -0.83
CCDC113-201ENST00000219299 PLAAQ9Y263 795 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms