RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 FOXP3Q9BZS1 431 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 ST6GALNAC4Q9H4F1 302 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 APOBEC3GQ9HC16 384 aaKnown RBP10.22□□□□□ -0.77
CSTF1-201ENST00000217109 SLCO1B3Q9NPD5 702 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 MROH7Q68CQ1 1323 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 APOL1O14791 398 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 KRT38O76015 456 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 STAG3L1P0CL83 205 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 RBP5P82980 135 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 PTPN11Q06124 597 aaPredicted RBP10.22□□□□□ -0.77
CSTF1-201ENST00000217109 NME3Q13232 169 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 MORF4L2Q15014 288 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 HEATR6Q6AI08 1181 aaKnown RBP10.22□□□□□ -0.77
CSTF1-201ENST00000217109 ACOT1Q86TX2 421 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 NUDCD3Q8IVD9 361 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 SMC1BQ8NDV3 1235 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 PAFAH2Q99487 392 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 TSSK1BQ9BXA7 367 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 NT5C1AQ9BXI3 368 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 USP18Q9UMW8 372 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 BCORQ6W2J9 1755 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 DOCK2Q92608 1830 aa10.22□□□□□ -0.77
CSTF1-201ENST00000217109 TXNDC9O14530 226 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 B4GALT5O43286 388 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 RAD23BP54727 409 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 MCL1Q07820 350 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 SLC20A2Q08357 652 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 AP1B1Q10567 949 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 SPDYCQ5MJ68 293 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 GJC2Q5T442 439 aaPredicted RBP10.21□□□□□ -0.77
CSTF1-201ENST00000217109 SLC39A4Q6P5W5 647 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 DLK2Q6UY11 383 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 CATSPERGQ6ZRH7 1159 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 AGAP3Q96P47 875 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 RSAD1Q9HA92 442 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 RNF181Q9P0P0 153 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 ARHGAP28Q9P2N2 729 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 PNMA3Q9UL41 463 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 AHDC1Q5TGY3 1603 aaPredicted RBP10.21□□□□□ -0.77
CSTF1-201ENST00000217109 LOC102724159A0A0B4J2E5 919 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 SPDYE16A6NNV3 312 aaPredicted RBP10.21□□□□□ -0.77
CSTF1-201ENST00000217109 SPATA31C2B4DYI2 1134 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 HBP1O60381 514 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 C4BPAP04003 597 aaKnown RBP10.21□□□□□ -0.77
CSTF1-201ENST00000217109 PDHA1P08559 390 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 GPD1P21695 349 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 GCKP35557 465 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 CPA2P48052 419 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 PWP2Q15269 919 aaKnown RBP10.21□□□□□ -0.77
CSTF1-201ENST00000217109 MROH9Q5TGP6 573 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 LONP2Q86WA8 852 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 SIX6OS1Q8N1H7 587 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 RXFP2Q8WXD0 754 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 PRCCQ92733 491 aaPredicted RBP10.21□□□□□ -0.77
CSTF1-201ENST00000217109 TLCD1Q96CP7 247 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 SLITRK1Q96PX8 696 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 TMEM237Q96Q45 408 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 ERAP1Q9NZ08 941 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 TRIM33Q9UPN9 1127 aa10.21□□□□□ -0.77
CSTF1-201ENST00000217109 NHSL1Q5SYE7 1610 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 A0A0B4J269 797 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 LIASO43766 372 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 KCNJ2P63252 427 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 C1orf220Q5T0J3 134 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 RAPH1Q70E73 1250 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 DTX3LQ8TDB6 740 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 CENPTQ96BT3 561 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 VPS11Q9H270 941 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 PRMT7Q9NVM4 692 aaPredicted RBP10.21□□□□□ -0.78
CSTF1-201ENST00000217109 CCDC78A2IDD5 438 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 TRIM49D1C9J1S8 452 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 NCF2P19878 526 aaPredicted RBP10.21□□□□□ -0.78
CSTF1-201ENST00000217109 RPA3P35244 121 aaPredicted RBP10.21□□□□□ -0.78
CSTF1-201ENST00000217109 KDSRQ06136 332 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 FASTKD3Q14CZ7 662 aaKnown RBP10.21□□□□□ -0.78
CSTF1-201ENST00000217109 NXNQ6DKJ4 435 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 CRLF3Q8IUI8 442 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 RIBC1Q8N443 379 aaPredicted RBP10.21□□□□□ -0.78
CSTF1-201ENST00000217109 ZCCHC9Q8N567 271 aaKnown RBP10.21□□□□□ -0.78
CSTF1-201ENST00000217109 DNERQ8NFT8 737 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 AGR3Q8TD06 166 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 NSMCE1Q8WV22 266 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 DDX27Q96GQ7 796 aaKnown RBP10.21□□□□□ -0.78
CSTF1-201ENST00000217109 SCYL1Q96KG9 808 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 PCMTD2Q9NV79 361 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 COQ4Q9Y3A0 265 aa10.21□□□□□ -0.78
CSTF1-201ENST00000217109 CNTNAP1P78357 1384 aa10.2□□□□□ -0.78
CSTF1-201ENST00000217109 ATP5HO75947 161 aa10.2□□□□□ -0.78
CSTF1-201ENST00000217109 LSM8O95777 96 aaKnown RBP10.2□□□□□ -0.78
CSTF1-201ENST00000217109 MIPP30301 263 aa10.2□□□□□ -0.78
CSTF1-201ENST00000217109 TGFB2P61812 414 aa10.2□□□□□ -0.78
CSTF1-201ENST00000217109 KIZQ2M2Z5 673 aa10.2□□□□□ -0.78
CSTF1-201ENST00000217109 GOLGA7BQ2TAP0 167 aa10.2□□□□□ -0.78
CSTF1-201ENST00000217109 HSDL1Q3SXM5 330 aa10.2□□□□□ -0.78
CSTF1-201ENST00000217109 EEF1DP3Q658K8 133 aa10.2□□□□□ -0.78
CSTF1-201ENST00000217109 ZPBP2Q6X784 338 aa10.2□□□□□ -0.78
CSTF1-201ENST00000217109 ZNF518BQ9C0D4 1074 aa10.2□□□□□ -0.78
CSTF1-201ENST00000217109 SMYD3Q9H7B4 428 aa10.2□□□□□ -0.78
CSTF1-201ENST00000217109 IFT122Q9HBG6 1241 aa10.2□□□□□ -0.78
CSTF1-201ENST00000217109 PCDH9Q9HC56 1237 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms