RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 POLNQ7Z5Q5 900 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 ACOT1Q86TX2 421 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 KLHDC9Q8NEP7 349 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 APPL2Q8NEU8 664 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 MCRS1Q96EZ8 462 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 CAPNS2Q96L46 248 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 SNX25Q9H3E2 840 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 METTL5Q9NRN9 209 aaKnown RBP18.35■□□□□ 0.53
VRK1-201ENST00000216639 SLC38A7Q9NVC3 462 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 TOMM70O94826 608 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 SYF2O95926 243 aaKnown RBP18.35■□□□□ 0.53
VRK1-201ENST00000216639 KRT7P08729 469 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 CTSHP09668 335 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 PPP1R7Q15435 360 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 C1orf54Q8WWF1 131 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 FMO2Q99518 471 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 FAM129AQ9BZQ8 928 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 FAM105AQ9NUU6 356 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 RNF186Q9NXI6 227 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 VPS18Q9P253 973 aa18.35■□□□□ 0.53
VRK1-201ENST00000216639 AGPSO00116 658 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 HUS1O60921 280 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 TJP3O95049 919 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 GAS8O95995 478 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 LRPAP1P30533 357 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 KLF1Q13351 362 aaPredicted RBP18.34■□□□□ 0.53
VRK1-201ENST00000216639 LLGL1Q15334 1064 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 CCNG2Q16589 344 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 PTGISQ16647 500 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 PPP1R26Q5T8A7 1209 aaPredicted RBP18.34■□□□□ 0.53
VRK1-201ENST00000216639 FAM102AQ5T9C2 384 aaPredicted RBP18.34■□□□□ 0.53
VRK1-201ENST00000216639 ARHGAP17Q68EM7 881 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 C12orf29Q8N999 325 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 JOSD2Q8TAC2 188 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 RNF25Q96BH1 459 aaPredicted RBP18.34■□□□□ 0.53
VRK1-201ENST00000216639 SLITRK1Q96PX8 696 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 HEMGNQ9BXL5 484 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 TJP2Q9UDY2 1190 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 SRRDQ9UH36 339 aa18.34■□□□□ 0.53
VRK1-201ENST00000216639 RNF40O75150 1001 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 CABYRO75952 493 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 RNF8O76064 485 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 CHRNA1P02708 482 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 ELNP15502 786 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 GNL1P36915 607 aaPredicted RBP18.33■□□□□ 0.52
VRK1-201ENST00000216639 THPOP40225 353 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 TERF2Q15554 542 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 OR6B2Q6IFH4 312 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 RNF180Q86T96 592 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 TOP6BLQ8N6T0 577 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 ARRDC4Q8NCT1 418 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 ATL2Q8NHH9 583 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 DCLK3Q9C098 648 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 NEUROG2Q9H2A3 272 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 RNF19AQ9NV58 838 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 ASNSD1Q9NWL6 643 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 MTRF1LQ9UGC7 380 aaKnown RBP18.33■□□□□ 0.52
VRK1-201ENST00000216639 FAN1Q9Y2M0 1017 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 PTPN22Q9Y2R2 807 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 SNX24Q9Y343 169 aa18.33■□□□□ 0.52
VRK1-201ENST00000216639 GOLGA8KD6RF30 607 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 CAPN15O75808 1086 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 FAM163BP0C2L3 166 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 DESP17661 470 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 PTPN7P35236 360 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 KCNJ1P48048 391 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 SOX4Q06945 474 aaPredicted RBP18.32■□□□□ 0.52
VRK1-201ENST00000216639 MGAT3Q09327 533 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 CCSAPQ6IQ19 270 aaPredicted RBP18.32■□□□□ 0.52
VRK1-201ENST00000216639 IQCKQ8N0W5 287 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 CRYBG2Q8N1P7 616 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 STK32AQ8WU08 396 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 TNIP3Q96KP6 325 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 ZIM3Q96PE6 472 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 CFHR5Q9BXR6 569 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 FAM49BQ9NUQ9 324 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 SCN1AP35498 2009 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 E5RJQ4 531 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 LMNB2Q03252 620 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 CALCOCO2Q13137 446 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 SNX1Q13596 522 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 TFDP3Q5H9I0 405 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 SPDYCQ5MJ68 293 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 SPOCD1Q6ZMY3 1216 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 ZDHHC17Q8IUH5 632 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 EMC1Q8N766 993 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 WNT8BQ93098 351 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 ZBTB9Q96C00 473 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 PPP1R10Q96QC0 940 aaKnown RBP18.32■□□□□ 0.52
VRK1-201ENST00000216639 SH3GL2Q99962 352 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 CHST7Q9NS84 486 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 DDX20Q9UHI6 824 aaKnown RBP18.32■□□□□ 0.52
VRK1-201ENST00000216639 NOD1Q9Y239 953 aa18.32■□□□□ 0.52
VRK1-201ENST00000216639 LRRD1A4D1F6 860 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 PTGESO14684 152 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 SPTLC1O15269 473 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 LRCH4O75427 683 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 PFKMP08237 780 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 TCF4P15884 667 aa18.31■□□□□ 0.52
VRK1-201ENST00000216639 GPD1P21695 349 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms