RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 PON2Q15165 354 aa23.73■■□□□ 1.39
VTI1B-201ENST00000216456 NFE2Q16621 373 aaPredicted RBP23.73■■□□□ 1.39
VTI1B-201ENST00000216456 DUOXA2Q1HG44 320 aa23.73■■□□□ 1.39
VTI1B-201ENST00000216456 LIMS2Q7Z4I7 341 aa23.73■■□□□ 1.39
VTI1B-201ENST00000216456 ZBTB44Q8NCP5 570 aa23.73■■□□□ 1.39
VTI1B-201ENST00000216456 PLEKHO2Q8TD55 490 aa23.73■■□□□ 1.39
VTI1B-201ENST00000216456 LEO1Q8WVC0 666 aaPredicted RBP23.73■■□□□ 1.39
VTI1B-201ENST00000216456 NELL1Q92832 810 aa23.73■■□□□ 1.39
VTI1B-201ENST00000216456 SLC22A12Q96S37 553 aa23.73■■□□□ 1.39
VTI1B-201ENST00000216456 MRPL45Q9BRJ2 306 aaKnown RBP23.73■■□□□ 1.39
VTI1B-201ENST00000216456 KIAA0391O15091 583 aaKnown RBP23.72■■□□□ 1.39
VTI1B-201ENST00000216456 CYP24A1Q07973 514 aa23.72■■□□□ 1.39
VTI1B-201ENST00000216456 ARHGAP29Q52LW3 1261 aa23.72■■□□□ 1.39
VTI1B-201ENST00000216456 SPATA2LQ8IUW3 424 aaPredicted RBP23.72■■□□□ 1.39
VTI1B-201ENST00000216456 WDR49Q8IV35 697 aa23.72■■□□□ 1.39
VTI1B-201ENST00000216456 TTC16Q8NEE8 873 aa23.72■■□□□ 1.39
VTI1B-201ENST00000216456 MYLPFQ96A32 169 aa23.72■■□□□ 1.39
VTI1B-201ENST00000216456 CHFRQ96EP1 664 aa23.72■■□□□ 1.39
VTI1B-201ENST00000216456 CYP2S1Q96SQ9 504 aa23.72■■□□□ 1.39
VTI1B-201ENST00000216456 SYT15Q9BQS2 421 aa23.72■■□□□ 1.39
VTI1B-201ENST00000216456 HPS4Q9NQG7 708 aa23.72■■□□□ 1.39
VTI1B-201ENST00000216456 GKN1Q9NS71 199 aa23.72■■□□□ 1.39
VTI1B-201ENST00000216456 ZSCAN32Q9NX65 697 aa23.72■■□□□ 1.39
VTI1B-201ENST00000216456 KLRC4O43908 158 aa23.71■■□□□ 1.39
VTI1B-201ENST00000216456 TNNI1P19237 187 aa23.71■■□□□ 1.39
VTI1B-201ENST00000216456 MYO1EQ12965 1108 aa23.71■■□□□ 1.39
VTI1B-201ENST00000216456 NAIF1Q69YI7 327 aaPredicted RBP23.71■■□□□ 1.39
VTI1B-201ENST00000216456 FAM171BQ6P995 826 aa23.71■■□□□ 1.39
VTI1B-201ENST00000216456 CELF5Q8N6W0 485 aaKnown RBP23.71■■□□□ 1.39
VTI1B-201ENST00000216456 ATRIPQ8WXE1 791 aa23.71■■□□□ 1.39
VTI1B-201ENST00000216456 MMS19Q96T76 1030 aa23.71■■□□□ 1.39
VTI1B-201ENST00000216456 OBP2AQ9NY56 170 aa23.71■■□□□ 1.39
VTI1B-201ENST00000216456 FAM13BQ9NYF5 915 aa23.71■■□□□ 1.39
VTI1B-201ENST00000216456 RCOR1Q9UKL0 485 aa23.71■■□□□ 1.39
VTI1B-201ENST00000216456 ZDHHC9Q9Y397 364 aa23.71■■□□□ 1.39
VTI1B-201ENST00000216456 PCDHGA2Q9Y5H1 932 aa23.71■■□□□ 1.39
VTI1B-201ENST00000216456 KIF26AQ9ULI4 1882 aaPredicted RBP23.7■■□□□ 1.39
VTI1B-201ENST00000216456 ACTN4O43707 911 aaKnown RBP23.7■■□□□ 1.38
VTI1B-201ENST00000216456 LILRB5O75023 590 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 NOL4O94818 638 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 CSH1P0DML2 217 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 CSH2P0DML3 217 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 ARSAP15289 507 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 WEE1P30291 646 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 LHX1P48742 406 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 PSMD6Q15008 389 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 LPAL2Q16609 132 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 XXYLT1Q8NBI6 393 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 CGRRF1Q99675 332 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 EBF3Q9H4W6 596 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 C8orf33Q9H7E9 229 aaPredicted RBP23.7■■□□□ 1.38
VTI1B-201ENST00000216456 TRPC7Q9HCX4 862 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 ABCB6Q9NP58 842 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 OBSL1O75147 1896 aa23.7■■□□□ 1.38
VTI1B-201ENST00000216456 A0A1B0GVL5 298 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 BDNFP23560 247 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 PCSK1P29120 753 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 AVPR1AP37288 418 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 USP46P62068 366 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 RPL10AP62906 217 aaKnown RBP23.69■■□□□ 1.38
VTI1B-201ENST00000216456 STK4Q13043 487 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 SURF1Q15526 300 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 BMT2Q1RMZ1 405 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 PKN3Q6P5Z2 889 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 MON1AQ86VX9 555 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 KIAA0895Q8NCT3 520 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 RUBCNQ92622 972 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 FAM83CQ9BQN1 747 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 DPEP3Q9H4B8 488 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 MAGEF1Q9HAY2 307 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 R3HCC1Q9Y3T6 440 aaKnown RBP23.69■■□□□ 1.38
VTI1B-201ENST00000216456 DENND4CQ5VZ89 1909 aa23.69■■□□□ 1.38
VTI1B-201ENST00000216456 C2orf78A6NCI8 922 aa23.68■■□□□ 1.38
VTI1B-201ENST00000216456 CACNA2D1P54289 1103 aa23.68■■□□□ 1.38
VTI1B-201ENST00000216456 MYL6P60660 151 aa23.68■■□□□ 1.38
VTI1B-201ENST00000216456 SRSF5Q13243 272 aaKnown RBP23.68■■□□□ 1.38
VTI1B-201ENST00000216456 CFAP221Q4G0U5 840 aa23.68■■□□□ 1.38
VTI1B-201ENST00000216456 RALGPS2Q86X27 583 aaPredicted RBP23.68■■□□□ 1.38
VTI1B-201ENST00000216456 MRPS31Q92665 395 aaKnown RBP23.68■■□□□ 1.38
VTI1B-201ENST00000216456 RMDN1Q96DB5 314 aa23.68■■□□□ 1.38
VTI1B-201ENST00000216456 PAGE5Q96GU1 130 aa23.68■■□□□ 1.38
VTI1B-201ENST00000216456 FNBP1Q96RU3 617 aa23.68■■□□□ 1.38
VTI1B-201ENST00000216456 KIAA1586Q9HCI6 787 aa23.68■■□□□ 1.38
VTI1B-201ENST00000216456 TDP1Q9NUW8 608 aa23.68■■□□□ 1.38
VTI1B-201ENST00000216456 TMEM30AQ9NV96 361 aa23.68■■□□□ 1.38
VTI1B-201ENST00000216456 POLR3BQ9NW08 1133 aaPredicted RBP23.68■■□□□ 1.38
VTI1B-201ENST00000216456 SMG5Q9UPR3 1016 aaKnown RBP23.68■■□□□ 1.38
VTI1B-201ENST00000216456 UBE4BO95155 1302 aa23.67■■□□□ 1.38
VTI1B-201ENST00000216456 PFKFB1P16118 471 aa23.67■■□□□ 1.38
VTI1B-201ENST00000216456 WARSP23381 471 aaKnown RBP23.67■■□□□ 1.38
VTI1B-201ENST00000216456 ID4P47928 161 aa23.67■■□□□ 1.38
VTI1B-201ENST00000216456 MLLT6P55198 1093 aaPredicted RBP23.67■■□□□ 1.38
VTI1B-201ENST00000216456 CYP27A1Q02318 531 aa23.67■■□□□ 1.38
VTI1B-201ENST00000216456 KNOP1Q1ED39 458 aaKnown RBP23.67■■□□□ 1.38
VTI1B-201ENST00000216456 ITPRIPL2Q3MIP1 535 aa23.67■■□□□ 1.38
VTI1B-201ENST00000216456 MDH1BQ5I0G3 518 aa23.67■■□□□ 1.38
VTI1B-201ENST00000216456 PCED1BQ96HM7 432 aa23.67■■□□□ 1.38
VTI1B-201ENST00000216456 FBRSL1Q9HCM7 1045 aaKnown RBP23.67■■□□□ 1.38
VTI1B-201ENST00000216456 MAGEC2Q9UBF1 373 aaPredicted RBP23.67■■□□□ 1.38
VTI1B-201ENST00000216456 CDH9Q9ULB4 789 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms