RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 RDM1Q8NG50 284 aa16.64■□□□□ 0.26
SNAPC1-201ENST00000216294 C10orf82Q8WW14 230 aa16.64■□□□□ 0.26
SNAPC1-201ENST00000216294 PDLIM7Q9NR12 457 aa16.64■□□□□ 0.26
SNAPC1-201ENST00000216294 PARVAQ9NVD7 372 aa16.64■□□□□ 0.26
SNAPC1-201ENST00000216294 SPATA31C2B4DYI2 1134 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 K7ERI5 159 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 PEX11AO75192 247 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 FAM155BO75949 473 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 GARTP22102 1010 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 RFC1P35251 1148 aaPredicted RBP16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 IREB2P48200 963 aaKnown RBP16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 CTCFP49711 727 aaPredicted RBP16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 RAD23BP54727 409 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 OTUD4Q01804 1114 aaKnown RBP16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 TTLL12Q14166 644 aaPredicted RBP16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 SETDB1Q15047 1291 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 BBS9Q3SYG4 887 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 GNPTABQ3T906 1256 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 EAPPQ56P03 285 aaPredicted RBP16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 DPH6Q7L8W6 267 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 NCAPG2Q86XI2 1143 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 ARFGAP1Q8N6T3 406 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 CHST13Q8NET6 341 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 ACTL9Q8TC94 416 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 TCP10LQ8TDR4 215 aa16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 MRPL47Q9HD33 250 aaKnown RBP16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 METTL5Q9NRN9 209 aaKnown RBP16.64■□□□□ 0.25
SNAPC1-201ENST00000216294 hCG_1818297A0A087WSY0 165 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 TYROBPO43914 113 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 PSAPP07602 524 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 DNAJC24Q6P3W2 148 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 NPNTQ6UXI9 565 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 C3orf62Q6ZUJ4 267 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 UNC45BQ8IWX7 931 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 ATP6V0A1Q93050 837 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 CDCA5Q96FF9 252 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 FAM81BQ96LP2 452 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 TCHPQ9BT92 498 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 DENND2DQ9H6A0 471 aaPredicted RBP16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 LCTP09848 1927 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 MGAMO43451 1857 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 CFAP69A5D8W1 941 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 MMP8P22894 467 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 SNRPFP62306 86 aaKnown RBP16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 OASLQ15646 514 aaKnown RBP16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 STXBP2Q15833 593 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 PDK4Q16654 411 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 NLRP9Q7RTR0 991 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 USP37Q86T82 979 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 RPAINQ86UA6 219 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 CCDC33Q8N5R6 958 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 FBXO36Q8NEA4 188 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 CDHR1Q96JP9 859 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 MIPEPQ99797 713 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 TRIM56Q9BRZ2 755 aaKnown RBP16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 CYTH4Q9UIA0 394 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 RABGEF1Q9UJ41 708 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 CHMP2BQ9UQN3 213 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 STARD13Q9Y3M8 1113 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 USH1CQ9Y6N9 552 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 NFASCO94856 1347 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 A0A0G2JLL6 359 aaPredicted RBP16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 MAP3K13O43283 966 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 CST8O60676 142 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 DGAT1O75907 488 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 TMEM63AO94886 807 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 GJB1P08034 283 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 CDKN2BP42772 138 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 CPA2P48052 419 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 VCPP55072 806 aaKnown RBP16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 CRYMQ14894 314 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 SMAD1Q15797 465 aaKnown RBP16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 ABHD15Q6UXT9 468 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 ENOSF1Q7L5Y1 443 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 EEPD1Q7L9B9 569 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 PRRT2Q7Z6L0 340 aaPredicted RBP16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 TTC7BQ86TV6 843 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 PHF13Q86YI8 300 aaPredicted RBP16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 CPT1BQ92523 772 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 NUDCD1Q96RS6 583 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 TIPINQ9BVW5 301 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 SPATC1LQ9H0A9 340 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 ZNF395Q9H8N7 513 aaPredicted RBP16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 AGTPBP1Q9UPW5 1226 aa16.63■□□□□ 0.25
SNAPC1-201ENST00000216294 PAPPA2Q9BXP8 1791 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 PTPRFP10586 1907 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 TJP3O95049 919 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 TUBP50607 506 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 CCNHP51946 323 aaPredicted RBP16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 CDH8P55286 799 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 MKRN3Q13064 507 aaKnown RBP16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 NBPF20Q3BBV1 942 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 MDH1BQ5I0G3 518 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 SH3PXD2AQ5TCZ1 1133 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 PAXIP1Q6ZW49 1069 aaPredicted RBP16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 RIOX2Q8IUF8 465 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 FAM71DQ8N9W8 422 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 TRIM11Q96F44 468 aa16.62■□□□□ 0.25
SNAPC1-201ENST00000216294 PAFAH2Q99487 392 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms