RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 USP13Q92995 863 aaPredicted RBP16.09■□□□□ 0.17
UPK3A-201ENST00000216211 SECISBP2LQ93073 1101 aaKnown RBP16.09■□□□□ 0.17
UPK3A-201ENST00000216211 C2orf42Q9NWW7 574 aa16.09■□□□□ 0.17
UPK3A-201ENST00000216211 HSPBP1Q9NZL4 362 aa16.09■□□□□ 0.17
UPK3A-201ENST00000216211 R3HCC1Q9Y3T6 440 aaKnown RBP16.09■□□□□ 0.17
UPK3A-201ENST00000216211 CACNA1AO00555 2505 aa16.08■□□□□ 0.17
UPK3A-201ENST00000216211 KIAA1549LQ6ZVL6 1849 aa16.08■□□□□ 0.17
UPK3A-201ENST00000216211 EML5Q05BV3 1969 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 GABRDO14764 452 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 CUTAO60888 179 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 TADA3O75528 432 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 YEATS4O95619 227 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 TNNC2P02585 160 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 LHX1P48742 406 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 AMPD3Q01432 767 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 MYO1EQ12965 1108 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 FOXD4L6Q3SYB3 417 aaPredicted RBP16.08■□□□□ 0.16
UPK3A-201ENST00000216211 TRIM68Q6AZZ1 485 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 SHC4Q6S5L8 630 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 FOXD4L3Q6VB84 417 aaPredicted RBP16.08■□□□□ 0.16
UPK3A-201ENST00000216211 SPATA2LQ8IUW3 424 aaPredicted RBP16.08■□□□□ 0.16
UPK3A-201ENST00000216211 SCN4BQ8IWT1 228 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 RDH13Q8NBN7 331 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 RIN3Q8TB24 985 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 MRPS31Q92665 395 aaKnown RBP16.08■□□□□ 0.16
UPK3A-201ENST00000216211 HPDLQ96IR7 371 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 CUEDC2Q9H467 287 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 ABCB6Q9NP58 842 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 HPS4Q9NQG7 708 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 TDP1Q9NUW8 608 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 ZMYM5Q9UJ78 669 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 CEP250Q9BV73 2442 aa16.08■□□□□ 0.16
UPK3A-201ENST00000216211 CHURC1-FNTBB4DL54 471 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 K7ESF4 209 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 EIF3DO15371 548 aaKnown RBP eCLIP16.07■□□□□ 0.16
UPK3A-201ENST00000216211 ATP2C2O75185 946 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 NOL4O94818 638 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 PCSK1P29120 753 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 CASP1P29466 404 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 HOXC13P31276 330 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 FNTBP49356 437 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 RUNX3Q13761 415 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 CCINQ13939 588 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 SURF1Q15526 300 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 DUOXA2Q1HG44 320 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 RSPO4Q2I0M5 234 aaPredicted RBP16.07■□□□□ 0.16
UPK3A-201ENST00000216211 FAM26FQ5R3K3 315 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 PRR23BQ6ZRT6 265 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 EPM2AIP1Q7L775 607 aaPredicted RBP16.07■□□□□ 0.16
UPK3A-201ENST00000216211 DGLUCYQ7Z3D6 616 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 MON1AQ86VX9 555 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 IQUBQ8NA54 791 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 SPATA18Q8TC71 538 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 ZNF507Q8TCN5 953 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 KBTBD7Q8WVZ9 684 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 TRMT2BQ96GJ1 504 aaKnown RBP16.07■□□□□ 0.16
UPK3A-201ENST00000216211 C7orf25Q9BPX7 421 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 FAM83CQ9BQN1 747 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 EBF3Q9H4W6 596 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 KIF9Q9HAQ2 790 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 UXTQ9UBK9 157 aaPredicted RBP16.07■□□□□ 0.16
UPK3A-201ENST00000216211 GMEB2Q9UKD1 530 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 RAB23Q9ULC3 237 aa16.07■□□□□ 0.16
UPK3A-201ENST00000216211 OTOL1A6NHN0 477 aaPredicted RBP16.06■□□□□ 0.16
UPK3A-201ENST00000216211 CLIC2O15247 247 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 TGFB1I1O43294 461 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 LMO2P25791 158 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 PSMC1P62191 440 aaKnown RBP16.06■□□□□ 0.16
UPK3A-201ENST00000216211 SRSF5Q13243 272 aaKnown RBP16.06■□□□□ 0.16
UPK3A-201ENST00000216211 PUM1Q14671 1186 aaKnown RBP eCLIP16.06■□□□□ 0.16
UPK3A-201ENST00000216211 CFAP221Q4G0U5 840 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 HEATR6Q6AI08 1181 aaKnown RBP16.06■□□□□ 0.16
UPK3A-201ENST00000216211 FAM171BQ6P995 826 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 CLEC17AQ6ZS10 378 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 DPH6Q7L8W6 267 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 LIMS2Q7Z4I7 341 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 WDR49Q8IV35 697 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 NELFCDQ8IXH7 590 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 GPR161Q8N6U8 529 aaKnown RBP16.06■□□□□ 0.16
UPK3A-201ENST00000216211 FUBP3Q96I24 572 aaKnown RBP eCLIP16.06■□□□□ 0.16
UPK3A-201ENST00000216211 SYT15Q9BQS2 421 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 BLZF1Q9H2G9 400 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 KIAA1586Q9HCI6 787 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 TRPC7Q9HCX4 862 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 PARD6AQ9NPB6 346 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 AGPAT3Q9NRZ7 376 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 DLL3Q9NYJ7 618 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 MAGEC2Q9UBF1 373 aaPredicted RBP16.06■□□□□ 0.16
UPK3A-201ENST00000216211 USP18Q9UMW8 372 aa16.06■□□□□ 0.16
UPK3A-201ENST00000216211 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.05■□□□□ 0.16
UPK3A-201ENST00000216211 SOBPA7XYQ1 873 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 POLR2DO15514 142 aaKnown RBP16.05■□□□□ 0.16
UPK3A-201ENST00000216211 HRO43593 1189 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 PAPSS2O95340 614 aaPredicted RBP16.05■□□□□ 0.16
UPK3A-201ENST00000216211 PDGFRBP09619 1106 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 DLATP10515 647 aaKnown RBP16.05■□□□□ 0.16
UPK3A-201ENST00000216211 ARSAP15289 507 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 CYP2J2P51589 502 aa16.05■□□□□ 0.16
UPK3A-201ENST00000216211 ZNF268Q14587 947 aaPredicted RBP16.05■□□□□ 0.16
UPK3A-201ENST00000216211 SNRNP35Q16560 246 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms