RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 SLC30A1Q9Y6M5 507 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 SERPINI2O75830 405 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 SNRPAP09012 282 aaKnown RBP14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 ZNF286BP0CG31 522 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 IMPDH2P12268 514 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 TPH1P17752 444 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 ACAD10Q6JQN1 1059 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 C16orf89Q6UX73 402 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 MTDHQ86UE4 582 aaKnown RBP14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 PIK3R5Q8WYR1 880 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 JADE3Q92613 823 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 FAM205AQ6ZU69 1335 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 SH3BGRLO75368 114 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 FBXO16Q8IX29 292 aaPredicted RBP14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 HERC5Q9UII4 1024 aaKnown RBP14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 CHD1O14646 1710 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 CROCC2H7BZ55 1655 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 TGM2P21980 687 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 MAPRE2Q15555 327 aa14.15□□□□□ -0.14
TGFBR3-201ENST00000212355 F8W8V4 182 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 PTGER2P43116 358 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 MRPL28Q13084 256 aaKnown RBP14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 PATL1Q86TB9 770 aaKnown RBP14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 HDAC7Q8WUI4 952 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 ZBTB10Q96DT7 871 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 MED15Q96RN5 788 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 HACL1Q9UJ83 578 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 FGFR2P21802 821 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 PPATQ06203 517 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 AGBL2Q5U5Z8 902 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 PPIL6Q8IXY8 311 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 SMARCAD1Q9H4L7 1026 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 SPASTQ9UBP0 616 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 ERCC6L2Q5T890 1561 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 SUPT7LO94864 414 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 GMPSP49915 693 aaPredicted RBP14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 TCHHL1Q5QJ38 904 aaPredicted RBP14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 CLEC17AQ6ZS10 378 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 SEPT1Q8WYJ6 367 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 THUMPD3Q9BV44 507 aaKnown RBP14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 LACRTQ9GZZ8 138 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 ARHGAP31Q2M1Z3 1444 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 SSU72P8A0A1W2PR75 194 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 TSC22D2O75157 780 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 PYGMP11217 842 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 NFIAQ12857 509 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 CUL2Q13617 745 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 GTF2H3Q13889 308 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 TAF1CQ15572 869 aaPredicted RBP14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 CLEC16AQ2KHT3 1053 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 NYAP1Q6ZVC0 841 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 DDIT4Q9NX09 232 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 ZNF212Q9UDV6 495 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 ASB14A6NK59 587 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 TMEM253P0C7T8 217 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 RCAN1P53805 252 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 DYNC1I2Q13409 638 aaKnown RBP14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 ARHGEF6Q15052 776 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 NMD3Q96D46 503 aaKnown RBP14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 TEX13BQ9BXU2 312 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 NMRK2Q9NPI5 230 aa14.14□□□□□ -0.15
TGFBR3-201ENST00000212355 GLI1P08151 1106 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 FAM153BP0C7A2 387 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 CYP2C9P11712 490 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 FAM153CQ494X1 144 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 CYB5D1Q6P9G0 228 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 PRUNE1Q86TP1 453 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 SLC13A5Q86YT5 568 aaPredicted RBP14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 RNF148Q8N7C7 305 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 WDCPQ9H6R7 721 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 MYOZ2Q9NPC6 264 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 FAM153AQ9UHL3 310 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 FAM32AQ9Y421 112 aaKnown RBP14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 NR5A2O00482 541 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 NFIBO00712 420 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 HSPA1AP0DMV8 641 aaKnown RBP14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 HSPA1BP0DMV9 641 aaKnown RBP14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 CYP11B2P19099 503 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 ENGASEQ8NFI3 743 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 TMC2Q8TDI7 906 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 CELF6Q96J87 481 aaKnown RBP14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 H0Y626 953 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 TRIM16O95361 564 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 KCNK10P57789 538 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 CDC16Q13042 620 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 MFSD4BQ5TF39 518 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 ZNF571Q7Z3V5 609 aaPredicted RBP14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 ZNF34Q8IZ26 560 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 AGGF1Q8N302 714 aaeCLIP14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 TATDN2Q93075 761 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 OLFML3Q9NRN5 406 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 PCDHB2Q9Y5E7 798 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 RFX7Q2KHR2 1363 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 ACO1P21399 889 aaKnown RBP14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 SYDE1Q6ZW31 735 aaPredicted RBP14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 CACUL1Q86Y37 369 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 GJD4Q96KN9 370 aaPredicted RBP14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 BBS2Q9BXC9 721 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 DONSONQ9NYP3 566 aa14.13□□□□□ -0.15
TGFBR3-201ENST00000212355 RPS6KL1Q9Y6S9 549 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms