RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 ACTN2P35609 894 aa23.32■■□□□ 1.32
HOXC8-201ENST00000040584 PPIGQ13427 754 aaKnown RBP eCLIP23.32■■□□□ 1.32
HOXC8-201ENST00000040584 CPA5Q8WXQ8 436 aa23.32■■□□□ 1.32
HOXC8-201ENST00000040584 RSPH1Q8WYR4 309 aa23.32■■□□□ 1.32
HOXC8-201ENST00000040584 LPIN3Q9BQK8 851 aa23.32■■□□□ 1.32
HOXC8-201ENST00000040584 SELENOOQ9BVL4 669 aa23.32■■□□□ 1.32
HOXC8-201ENST00000040584 MRPL9Q9BYD2 267 aaKnown RBP23.32■■□□□ 1.32
HOXC8-201ENST00000040584 FNDC1Q4ZHG4 1894 aaPredicted RBP23.32■■□□□ 1.32
HOXC8-201ENST00000040584 CYP1A1P04798 512 aaPredicted RBP23.32■■□□□ 1.32
HOXC8-201ENST00000040584 IVLP07476 585 aa23.32■■□□□ 1.32
HOXC8-201ENST00000040584 VDRP11473 427 aa23.32■■□□□ 1.32
HOXC8-201ENST00000040584 ABCB4P21439 1286 aa23.32■■□□□ 1.32
HOXC8-201ENST00000040584 HNRNPH2P55795 449 aaKnown RBP23.32■■□□□ 1.32
HOXC8-201ENST00000040584 FPGSQ05932 587 aa23.32■■□□□ 1.32
HOXC8-201ENST00000040584 NAA35Q5VZE5 725 aa23.32■■□□□ 1.32
HOXC8-201ENST00000040584 EMBQ6PCB8 327 aa23.32■■□□□ 1.32
HOXC8-201ENST00000040584 TRIM72Q6ZMU5 477 aa23.32■■□□□ 1.32
HOXC8-201ENST00000040584 ANKRD62A6NC57 917 aa23.31■■□□□ 1.32
HOXC8-201ENST00000040584 EFCAB14O75071 495 aa23.31■■□□□ 1.32
HOXC8-201ENST00000040584 TMEM253P0C7T8 217 aa23.31■■□□□ 1.32
HOXC8-201ENST00000040584 EPHB4P54760 987 aa23.31■■□□□ 1.32
HOXC8-201ENST00000040584 SGO2Q562F6 1265 aa23.31■■□□□ 1.32
HOXC8-201ENST00000040584 COL13A1Q5TAT6 717 aaPredicted RBP23.31■■□□□ 1.32
HOXC8-201ENST00000040584 ACAD10Q6JQN1 1059 aa23.31■■□□□ 1.32
HOXC8-201ENST00000040584 STIM2Q9P246 746 aa23.31■■□□□ 1.32
HOXC8-201ENST00000040584 GABRDO14764 452 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 NRP1O14786 923 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 MED7O43513 233 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 BAIAP3O94812 1187 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 ALDH2P05091 517 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 FAM163BP0C2L3 166 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 NNTQ13423 1086 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 ZNF365Q70YC5 407 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 TMEM86AQ8N2M4 240 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 LRRC43Q8N309 656 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 LRRC1Q9BTT6 524 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 KIAA1257Q9ULG3 409 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 PCDHGC3Q9UN70 934 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 TMEM189-UBE2V1I3L0A0 370 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 M0QZQ0 153 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 SYF2O95926 243 aaKnown RBP23.3■■□□□ 1.32
HOXC8-201ENST00000040584 ODC1P11926 461 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 PAX3P23760 479 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 ACAT1P24752 427 aaKnown RBP23.3■■□□□ 1.32
HOXC8-201ENST00000040584 SLC11A1P49279 550 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 NOMO3P69849 1222 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 CENPCQ03188 943 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 ZSCAN26Q16670 478 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 MEI1Q5TIA1 1274 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 DENND1BQ6P3S1 775 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 CTNNBL1Q8WYA6 563 aaPredicted RBP23.3■■□□□ 1.32
HOXC8-201ENST00000040584 SUSD3Q96L08 255 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 THAP2Q9H0W7 228 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 FAM49BQ9NUQ9 324 aa23.3■■□□□ 1.32
HOXC8-201ENST00000040584 DDX43Q9NXZ2 648 aaKnown RBP23.3■■□□□ 1.32
HOXC8-201ENST00000040584 ZMYND8Q9ULU4 1186 aaPredicted RBP23.3■■□□□ 1.32
HOXC8-201ENST00000040584 A0A0A6YYK5 440 aaPredicted RBP23.29■■□□□ 1.32
HOXC8-201ENST00000040584 O00370 1275 aa23.29■■□□□ 1.32
HOXC8-201ENST00000040584 BUB1O43683 1085 aa23.29■■□□□ 1.32
HOXC8-201ENST00000040584 TADA2AO75478 443 aa23.29■■□□□ 1.32
HOXC8-201ENST00000040584 FGBP02675 491 aa23.29■■□□□ 1.32
HOXC8-201ENST00000040584 PBX3P40426 434 aa23.29■■□□□ 1.32
HOXC8-201ENST00000040584 CNGA2Q16280 664 aa23.29■■□□□ 1.32
HOXC8-201ENST00000040584 ALS2CLQ60I27 953 aa23.29■■□□□ 1.32
HOXC8-201ENST00000040584 IFT20Q8IY31 132 aa23.29■■□□□ 1.32
HOXC8-201ENST00000040584 CRYBG2Q8N1P7 616 aa23.29■■□□□ 1.32
HOXC8-201ENST00000040584 ABHD8Q96I13 439 aa23.29■■□□□ 1.32
HOXC8-201ENST00000040584 HTATIP2Q9BUP3 242 aa23.29■■□□□ 1.32
HOXC8-201ENST00000040584 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.29■■□□□ 1.32
HOXC8-201ENST00000040584 ZBBXA8MT70 800 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 RNF40O75150 1001 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 ATP2C2O75185 946 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 PALMO75781 387 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 MICAL2O94851 1124 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 GYS2P54840 703 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 PSMC1P62191 440 aaKnown RBP23.28■■□□□ 1.32
HOXC8-201ENST00000040584 PPP1R26Q5T8A7 1209 aaPredicted RBP23.28■■□□□ 1.32
HOXC8-201ENST00000040584 C8orf74Q6P047 294 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 WDTC1Q8N5D0 677 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 NCANO14594 1321 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 NT5C1B-RDH14C9J2C7 533 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 OPA1O60313 960 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 LSM8O95777 96 aaKnown RBP23.28■■□□□ 1.32
HOXC8-201ENST00000040584 GALTP07902 379 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 NSFP46459 744 aaKnown RBP23.28■■□□□ 1.32
HOXC8-201ENST00000040584 LHX1P48742 406 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 KIAA0319Q5VV43 1072 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 C1orf131Q8NDD1 294 aaKnown RBP23.28■■□□□ 1.32
HOXC8-201ENST00000040584 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.28■■□□□ 1.32
HOXC8-201ENST00000040584 CAVIN3Q969G5 261 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 ZNF689Q96CS4 500 aaPredicted RBP23.28■■□□□ 1.32
HOXC8-201ENST00000040584 ARHGEF26Q96DR7 871 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 TMEM175Q9BSA9 504 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 COLEC11Q9BWP8 271 aa23.28■■□□□ 1.32
HOXC8-201ENST00000040584 COL4A6Q14031 1691 aa23.27■■□□□ 1.32
HOXC8-201ENST00000040584 GOLGA6BA6NDN3 693 aa23.27■■□□□ 1.32
HOXC8-201ENST00000040584 CYP11A1P05108 521 aa23.27■■□□□ 1.32
HOXC8-201ENST00000040584 CCDC142Q17RM4 750 aa23.27■■□□□ 1.32
HOXC8-201ENST00000040584 C2CD6Q53TS8 623 aa23.27■■□□□ 1.32
HOXC8-201ENST00000040584 LCLAT1Q6UWP7 414 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms