RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 MYH4Q9Y623 1939 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 FOXO6A8MYZ6 492 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 CIB2O75838 187 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 RECQL4O94761 1208 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 AKR1A1P14550 325 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 ARL4CP56559 192 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 SNX16P57768 344 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 NBPF20Q3BBV1 942 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 SH3D19Q5HYK7 790 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 OLFML2BQ68BL8 750 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 ACAD10Q6JQN1 1059 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 LRRC34Q8IZ02 419 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 C12orf29Q8N999 325 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 FAM71DQ8N9W8 422 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 SEC16BQ96JE7 1060 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 TIPINQ9BVW5 301 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 METTL5Q9NRN9 209 aaKnown RBP12.66□□□□□ -0.38
CHPF2-201ENST00000035307 NUDT5Q9UKK9 219 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 GPR25O00155 361 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 SCAMP3O14828 347 aaKnown RBP12.66□□□□□ -0.38
CHPF2-201ENST00000035307 RARAP10276 462 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 RBP3P10745 1247 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 TMPRSS15P98073 1019 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 OVGP1Q12889 678 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 BYSLQ13895 437 aaKnown RBP12.66□□□□□ -0.38
CHPF2-201ENST00000035307 SGSM1Q2NKQ1 1148 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 ZNF484Q5JVG2 852 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 NOTUMQ6P988 496 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 AENQ8WTP8 325 aaKnown RBP12.66□□□□□ -0.38
CHPF2-201ENST00000035307 RAPGEF5Q92565 580 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 ATP2A3Q93084 1043 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 FAM81BQ96LP2 452 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 NIF3L1Q9GZT8 377 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 CTNNAL1Q9UBT7 734 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 DIS3Q9Y2L1 958 aaKnown RBP12.66□□□□□ -0.38
CHPF2-201ENST00000035307 PCDHA2Q9Y5H9 948 aa12.66□□□□□ -0.38
CHPF2-201ENST00000035307 CDK5RAP2Q96SN8 1893 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 ACKR2O00590 384 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 KCNN4O15554 427 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 MAFO75444 373 aaPredicted RBP12.65□□□□□ -0.38
CHPF2-201ENST00000035307 STAMBPO95630 424 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 SHBGP04278 402 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 RPL21P46778 160 aaKnown RBP12.65□□□□□ -0.38
CHPF2-201ENST00000035307 SEPT6Q14141 434 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 HIF1AQ16665 826 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 BHMTQ93088 406 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 LPIN3Q9BQK8 851 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 C17orf75Q9HAS0 396 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 MYPNQ86TC9 1320 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 RFX1P22670 979 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 SLC12A2P55011 1212 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 MUM1Q2TAK8 710 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 PLEKHO2Q8TD55 490 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 CALR3Q96L12 384 aaKnown RBP12.65□□□□□ -0.38
CHPF2-201ENST00000035307 CDC42EP4Q9H3Q1 356 aaKnown RBP12.65□□□□□ -0.38
CHPF2-201ENST00000035307 CDHR5Q9HBB8 845 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 STARD7Q9NQZ5 370 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 PPARGC1AQ9UBK2 798 aaKnown RBP12.65□□□□□ -0.38
CHPF2-201ENST00000035307 CFAP69A5D8W1 941 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 XPOTO43592 962 aaKnown RBP12.65□□□□□ -0.38
CHPF2-201ENST00000035307 HMBSP08397 361 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 PRLRP16471 622 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 GARTP22102 1010 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 RBP5P82980 135 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 SPARCL1Q14515 664 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 DUSP28Q4G0W2 176 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 PDCD7Q8N8D1 485 aaKnown RBP12.65□□□□□ -0.38
CHPF2-201ENST00000035307 EPS8L1Q8TE68 723 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 PGLYRP2Q96PD5 576 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 PCYT2Q99447 389 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 EIF2AQ9BY44 585 aaKnown RBP12.65□□□□□ -0.38
CHPF2-201ENST00000035307 TRABDQ9H4I3 376 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 PGAP2Q9UHJ9 254 aa12.65□□□□□ -0.38
CHPF2-201ENST00000035307 BCORQ6W2J9 1755 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 MMP3P08254 477 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 IL31Q6EBC2 164 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 MTHFD1LQ6UB35 978 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 RNF180Q86T96 592 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 SMC1BQ8NDV3 1235 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 SPATA18Q8TC71 538 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 DEPDC1BQ8WUY9 529 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 FAM167BQ9BTA0 163 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 ZBED2Q9BTP6 218 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 SENP6Q9GZR1 1112 aaPredicted RBP12.64□□□□□ -0.39
CHPF2-201ENST00000035307 VPS11Q9H270 941 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 MYH8P13535 1937 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 SNAI1O95863 264 aaPredicted RBP12.64□□□□□ -0.39
CHPF2-201ENST00000035307 CD52P31358 61 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 SARNPP82979 210 aaKnown RBP12.64□□□□□ -0.39
CHPF2-201ENST00000035307 AP1B1Q10567 949 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 SURF1Q15526 300 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 IQSEC1Q6DN90 963 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 SAPCD2Q86UD0 394 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 SPATS2Q86XZ4 545 aaKnown RBP12.64□□□□□ -0.39
CHPF2-201ENST00000035307 IFNL1Q8IU54 200 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 KREMEN1Q96MU8 473 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 TTYH3Q9C0H2 523 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 PABPC3Q9H361 631 aaKnown RBP12.64□□□□□ -0.39
CHPF2-201ENST00000035307 KCNH4Q9UQ05 1017 aa12.64□□□□□ -0.39
CHPF2-201ENST00000035307 ATP11BQ9Y2G3 1177 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms