RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 TSPYL2Q9H2G4 693 aaPredicted RBP11.17□□□□□ -0.62
CD4-201ENST00000011653 FAM49BQ9NUQ9 324 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 ZMYND8Q9ULU4 1186 aaPredicted RBP11.17□□□□□ -0.62
CD4-201ENST00000011653 DDX3XO00571 662 aaKnown RBP eCLIP11.17□□□□□ -0.62
CD4-201ENST00000011653 ZC3H11AO75152 810 aaKnown RBP eCLIP11.17□□□□□ -0.62
CD4-201ENST00000011653 H2AFZP0C0S5 128 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 CYP11B1P15538 503 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 GNA15P30679 374 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 MDH1P40925 334 aaKnown RBP11.17□□□□□ -0.62
CD4-201ENST00000011653 BRCC3P46736 316 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 MMS22LQ6ZRQ5 1243 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 H2AFVQ71UI9 128 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 SYCE1Q8N0S2 351 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 C12orf29Q8N999 325 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 CPA5Q8WXQ8 436 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 HEXIM2Q96MH2 286 aaKnown RBP11.17□□□□□ -0.62
CD4-201ENST00000011653 TWNKQ96RR1 684 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 MRPL45Q9BRJ2 306 aaKnown RBP11.17□□□□□ -0.62
CD4-201ENST00000011653 GOLPH3Q9H4A6 298 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 CNTN3Q9P232 1028 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 FBXL5Q9UKA1 691 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 PCDHB7Q9Y5E2 793 aa11.17□□□□□ -0.62
CD4-201ENST00000011653 CDH23Q9H251 3354 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 TRIM43BA6NCK2 446 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 ENPP3O14638 875 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 RPLP2P05387 115 aaKnown RBP11.16□□□□□ -0.62
CD4-201ENST00000011653 FAM26DQ5JW98 314 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 LLGL2Q6P1M3 1020 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 DSTYKQ6XUX3 929 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 C7orf61Q8IZ16 206 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 OTUD6BQ8N6M0 293 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 LNX1Q8TBB1 728 aaPredicted RBP11.16□□□□□ -0.62
CD4-201ENST00000011653 TRIM43Q96BQ3 446 aaPredicted RBP11.16□□□□□ -0.62
CD4-201ENST00000011653 FAM193BQ96PV7 902 aaPredicted RBP11.16□□□□□ -0.62
CD4-201ENST00000011653 AGPAT1Q99943 283 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 CENPHQ9H3R5 247 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 PLEKHA5Q9HAU0 1116 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 TMBIM4Q9HC24 238 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 ITGA11Q9UKX5 1188 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 SIP14410 1827 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 A0A0A6YYK5 440 aaPredicted RBP11.16□□□□□ -0.62
CD4-201ENST00000011653 KRIT1O00522 736 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 SART1O43290 800 aaKnown RBP11.16□□□□□ -0.62
CD4-201ENST00000011653 HSD17B3P37058 310 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 ASPAP45381 313 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 PSMC1P62191 440 aaKnown RBP11.16□□□□□ -0.62
CD4-201ENST00000011653 GCNT1Q02742 428 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 MTMR3Q13615 1198 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 DSC3Q14574 896 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 SPOUT1Q5T280 376 aaKnown RBP11.16□□□□□ -0.62
CD4-201ENST00000011653 NAA35Q5VZE5 725 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 ACOT1Q86TX2 421 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 FAM71AQ8IYT1 594 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 EPS8L1Q8TE68 723 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 PGBD4Q96DM1 585 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 AP1M1Q9BXS5 423 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 PRKAG2Q9UGJ0 569 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 INTUQ9ULD6 942 aa11.16□□□□□ -0.62
CD4-201ENST00000011653 SRRM3A6NNA2 597 aaPredicted RBP11.15□□□□□ -0.62
CD4-201ENST00000011653 TBKBP1A7MCY6 615 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 C9IYK1 514 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 XPOTO43592 962 aaKnown RBP11.15□□□□□ -0.62
CD4-201ENST00000011653 CCDC172P0C7W6 258 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 COL6A1P12109 1028 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 HPDP32754 393 aaPredicted RBP11.15□□□□□ -0.62
CD4-201ENST00000011653 NDST1P52848 882 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 ANKRD33Q7Z3H0 272 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 CEP57Q86XR8 500 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 C3orf58Q8NDZ4 430 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 ZNF473Q8WTR7 871 aaKnown RBP11.15□□□□□ -0.62
CD4-201ENST00000011653 DNAJB4Q9UDY4 337 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 FRMPD3Q5JV73 1810 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 CCDC85CA6NKD9 419 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 KPNA7A9QM74 516 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 PODXLO00592 558 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 B4GALT3O60512 393 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 ITGB1P05556 798 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 TBXAS1P24557 533 aaPredicted RBP11.15□□□□□ -0.62
CD4-201ENST00000011653 ECHS1P30084 290 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 CTNNA1P35221 906 aaKnown RBP11.15□□□□□ -0.62
CD4-201ENST00000011653 GTF2A1P52655 376 aaPredicted RBP11.15□□□□□ -0.62
CD4-201ENST00000011653 PLEKHG4Q58EX7 1191 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 CLLU1OSQ5K130 101 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 ALKAL1Q6UXT8 129 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 CCDC26Q8TAB7 109 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 PCDHB18PQ96TA0 734 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 DDX47Q9H0S4 455 aaKnown RBP11.15□□□□□ -0.62
CD4-201ENST00000011653 SLITRK6Q9H5Y7 841 aa11.15□□□□□ -0.62
CD4-201ENST00000011653 TMEM110-MUSTN1A8MSY1 372 aa11.15□□□□□ -0.63
CD4-201ENST00000011653 A8MXQ7 604 aa11.15□□□□□ -0.63
CD4-201ENST00000011653 PITPNM1O00562 1244 aa11.15□□□□□ -0.63
CD4-201ENST00000011653 HUS1O60921 280 aa11.15□□□□□ -0.63
CD4-201ENST00000011653 LMO2P25791 158 aa11.15□□□□□ -0.63
CD4-201ENST00000011653 TAF6P49848 677 aa11.15□□□□□ -0.63
CD4-201ENST00000011653 RAB27AP51159 221 aa11.15□□□□□ -0.63
CD4-201ENST00000011653 LILRA4P59901 499 aa11.15□□□□□ -0.63
CD4-201ENST00000011653 WSCD1Q658N2 575 aa11.15□□□□□ -0.63
CD4-201ENST00000011653 DAAM2Q86T65 1068 aa11.15□□□□□ -0.63
CD4-201ENST00000011653 NLRP14Q86W24 1093 aa11.15□□□□□ -0.63
CD4-201ENST00000011653 SUGP1Q8IWZ8 645 aaKnown RBP11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms