RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Rhox3cA2AWM0 215 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Abcb5B5X0E4 1255 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Gm10717D3Z1I8 228 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Rhox3hL7MU37 215 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Vmn2r15L7N2A0 855 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Hspa4lP48722 838 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Nom1Q3UFM5 854 aaKnown RBP16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Rhox3aQ4TU90 215 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Satb1Q60611 764 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Smarcd1Q61466 515 aaKnown RBP16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Prpf38bQ80SY5 542 aaKnown RBP16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Ppp1r15bQ8BFW3 697 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Pum3Q8BKS9 647 aaKnown RBP16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Samd3Q8C4H2 520 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Zdhhc3Q8R173 299 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Rab3il1Q8VDV3 383 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Znf622Q91VY9 476 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Pcdha12Q91Y18 950 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Fads1Q920L1 447 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Q922M7 232 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Mrps2Q924T2 291 aaKnown RBP16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Syce1Q9D495 329 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Scyl3Q9DBQ7 735 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Rnf6Q9DBU5 667 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Trpc7Q9WVC5 862 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 NcdnQ9Z0E0 729 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Mctp1E9PV86 951 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Speer4f2E9Q366 295 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 P01652 108 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Slc3a2P10852 526 aaKnown RBP16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Nub1P54729 614 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Irf7P70434 457 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 VcpQ01853 806 aaKnown RBP16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Rnf43Q5NCP0 784 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Cxcl17Q5UW37 119 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Serpinb6Q60854 378 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Igbp1Q61249 340 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Dnajc1Q61712 552 aaKnown RBP16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Gnl3Q8CI11 538 aaKnown RBP16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Mrpl38Q8K2M0 380 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Tmem134Q8R0J4 195 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 AdigQ8R400 80 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Snx9Q91VH2 595 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Cyp2c70Q91W64 489 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Med4Q9CQA5 270 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Fam174aQ9D3L0 190 aa16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Top3bQ9Z321 862 aaKnown RBP16.37■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Gm6657A0A1B0GRJ3 277 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Nfxl1E9Q8I7 918 aaKnown RBP16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Gm8334F7CD45 553 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Cd160O88875 185 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Ly6aP05533 134 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 SrgnP13609 152 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 YwhaeP62259 255 aaKnown RBP16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Eri2Q5BKS4 688 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Dsg1aQ61495 1057 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Olfr1415Q7TQS4 311 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Ppm1eQ80TL0 749 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Slitrk1Q810C1 696 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Abi3Q8BYZ1 367 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Cacnb2Q8CC27 655 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Scyl2Q8CFE4 930 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 RabepkQ8VCH5 380 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Mical1Q8VDP3 1048 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Olfr1416Q8VGU4 312 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Q91Z58 1206 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 NamptQ99KQ4 491 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Marc1Q9CW42 340 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Rbm31yQ9D3U4 565 aa16.36■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Gm4846B2RWH8 538 aa16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Rad51ap2G3UW63 976 aa16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Cldn2O88552 230 aa16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Alkbh1P0CB42 389 aa16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Gjb3P28231 270 aa16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Folr1P35846 255 aa16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Wbp2P97765 261 aa16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Nudt18Q3U2V3 323 aa16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Isy1Q69ZQ2 285 aaKnown RBP16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Retreg2Q6NS82 541 aa16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 CslQ80X68 466 aa16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Fam49bQ921M7 324 aa16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Fam111aQ9D2L9 613 aa16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Rpl4Q9D8E6 419 aaKnown RBP16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Arhgef10Q8C033 1345 aa16.35■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Vps13aQ5H8C4 3166 aa16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Zscan4-ps3A0A1B0GRH6 506 aa16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Prdm12A2AJ77 365 aa16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Gm5934D3Z4U6 212 aa16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Top6blJ3QMY9 579 aa16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Kifc3O35231 824 aa16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Aoc3O70423 765 aa16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Krt13P08730 437 aa16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Myl4P09541 193 aaKnown RBP16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Serpinh1P19324 417 aaKnown RBP16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Slc11a2P49282 568 aa16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Klra6Q60653 266 aa16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 KaznQ69ZS8 779 aa16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Heatr6Q6P1G0 1184 aaKnown RBP16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Hmgb4Q6P8W9 181 aa16.34■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Olfml3Q8BK62 406 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms