RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Vtcn1Q7TSP5 283 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Wdr3Q8BHB4 942 aaKnown RBP13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Gm13199Q8C8E0 125 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Ifi205aQ8CGE8 404 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Hip1Q8VD75 1029 aaKnown RBP13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Bloc1s4Q8VED2 215 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Gramd1aQ8VEF1 722 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Znf622Q91VY9 476 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Pcdha9Q91Y11 979 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Pcdha1Q91Y21 948 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 AdarQ99MU3 1178 aaKnown RBP13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Trp53inp1Q9QXE4 239 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Dnajb9Q9QYI6 222 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Vnn1Q9Z0K8 512 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 DmdP11531 3678 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Magea10A2AMW4 325 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Rasa1E9PYG6 1038 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Gm8334F7CD45 553 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Cetn3O35648 167 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 CtssO70370 340 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 P01650 108 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 P01653 108 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 RhoP15409 348 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Npr1P18293 1057 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Abcd1P48410 736 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 PtgdrP70263 357 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Mtf2Q02395 593 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Cyp11b1Q3TG86 501 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Aarsd1Q3THG9 412 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Fbxo38Q8BMI0 1194 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Pop1Q8K205 1045 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Zdhhc3Q8R173 299 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Slc35f5Q8R314 524 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Tbc1d19Q8VDV7 526 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Mrps2Q924T2 291 aaKnown RBP13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Phospho2Q9D9M5 241 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Asb3Q9WV72 525 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Cdc7Q9Z0H0 564 aa13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Stau1Q9Z108 487 aaKnown RBP13.01□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Glipr1l3A0A1W2P7V2 236 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Kcna10B2RQA1 511 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Ugt1a10E9PXN7 530 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Ugt1a6bK9J7B2 531 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Ebf3O08791 596 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Pias3O54714 628 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Cldn2O88552 230 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Calb1P12658 261 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Mcm4P49717 862 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Uchl4P58321 233 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Ppp3caP63328 521 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Ugt1a2P70691 533 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Cdh8P97291 799 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Cntn3Q07409 1028 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 IdsQ08890 552 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Rgs9bpQ148R9 237 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Nudt18Q3U2V3 323 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 HecaQ3V1N5 544 aaKnown RBP13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 MslnQ61468 625 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Ugt1a9Q62452 528 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Ugt1a1Q63886 535 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Ugt1a6Q64435 531 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Papd5Q68ED3 633 aaKnown RBP13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 C1qtnf6Q6IR41 264 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Heatr6Q6P1G0 1184 aaKnown RBP13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Naif1Q6PFD7 327 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Ugt1a7cQ6ZQM8 531 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Znf12Q7TSI0 686 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Cc2d1bQ8BRN9 848 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Pkn2Q8BWW9 983 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Setdb2Q8C267 713 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Acad9Q8JZN5 625 aaKnown RBP13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Rps6kl1Q8R2S1 544 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 AjubaQ91XC0 547 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 DeraQ91YP3 318 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Adgre4Q91ZE5 689 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Npffr2Q924H0 417 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Trmt10bQ9D075 318 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Kif12Q9D2Z8 642 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 1700123K08RikQ9D991 295 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Lmx1aQ9JKU8 382 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Nr4a3Q9QZB6 627 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Mfap5Q9QZJ6 164 aa13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Numa1E9Q7G0 2094 aaKnown RBP13□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Igkv10-94A0A075B5L1 115 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Gm5485A0A1D5RM98 91 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 A0A1L1SQF0 893 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Rhox3cA2AWM0 215 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Rhox3hL7MU37 215 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Vmn2r15L7N2A0 855 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Phox2bO35690 314 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 ChadO55226 358 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 LdhcP00342 332 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 LifP09056 203 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Zfy1P10925 782 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Fcgr1P26151 404 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Gsdmc2Q2KHK6 480 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Gsdmc4Q3TR54 480 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Ice2Q3UZ18 988 aaKnown RBP12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Rhox3aQ4TU90 215 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Hepacam2Q4VAH7 463 aa12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms