RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Mroh4G3X8W1 983 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Alkbh1P0CB42 389 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ptprn2P80560 1001 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Suz12Q80U70 741 aaKnown RBP14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Rbbp8Q80YR6 893 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Sept8Q8CHH9 429 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Emc2Q9CRD2 297 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 PrameQ9D4Z5 464 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Spata1Q9D5R4 444 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Phf2Q9WTU0 1096 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ino80Q6ZPV2 1559 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Rsrc2A2RTL5 376 aaKnown RBP14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Traf2P39429 501 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Rnf139Q7TMV1 668 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Fam185aQ7TPD2 378 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Scfd2Q8BTY8 684 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Nemp2Q8CB65 421 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Oas1dQ8VI95 361 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Bcs1lQ9CZP5 418 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Serpinb9bQ9DAV6 377 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 H2afyQ9QZQ8 372 aaKnown RBP14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 CtcflA2APF3 636 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Atf6F6VAN0 656 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Slc27a2O35488 620 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 BhmtO35490 407 aaKnown RBP14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Apoa1Q00623 264 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Trmt1Q3TX08 663 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 CamkvQ3UHL1 512 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Kcnk18Q6VV64 394 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Q8BGN9 141 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Slc9b1Q8C0X2 565 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Alg9Q8VDI9 611 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 CpdO89001 1377 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Dnmt1P13864 1620 aaKnown RBP14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 RerglB2RVE2 204 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 ItgalP24063 1163 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Klhdc10Q6PAR0 439 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ccdc59Q8R2N0 240 aaKnown RBP14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Pcdha9Q91Y11 979 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 NgrnQ99KS2 293 aaKnown RBP14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Batf3Q9D275 118 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ap4b1Q9WV76 738 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 HaspinQ9Z0R0 754 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Abcb11Q9QY30 1321 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 AspgA0JNU3 564 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Gm8113E0CXS8 587 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Hk2O08528 917 aaKnown RBP14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Pstpip1P97814 415 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ttc39dQ0VF76 604 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Gpd1lQ3ULJ0 351 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Lcp1Q61233 627 aaKnown RBP14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Sun2Q8BJS4 731 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 DpydQ8CHR6 1025 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Slxl1Q9D515 155 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Dcaf6Q9DC22 876 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Dgcr8Q9EQM6 773 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Dlc1Q9R0Z9 1092 aa14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ruvbl2Q9WTM5 463 aaKnown RBP14.5□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Ak9G3UYQ4 1894 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Rgs4O08899 205 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Tpst1O70281 370 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 BtkP35991 659 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Shcbp1lQ3TTP0 639 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Zfp263Q8CF60 680 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Serpina3nQ91WP6 418 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Mta3Q924K8 591 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Eps8l2Q99K30 729 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Poc5Q9DBS8 558 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Nup50Q9JIH2 466 aaKnown RBP14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Zscan4-ps1A0A1C7CYV3 506 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Zscan4dA7KBS4 506 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Cdh18E9Q9Q6 790 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Hps1O08983 704 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 RargP18911 458 aaKnown RBP14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 SarsP26638 512 aaKnown RBP14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Aqp1Q02013 269 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Zscan4fQ3URS2 506 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Afg1lQ3V384 480 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Phc1Q64028 1012 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Tmc4Q7TQ65 694 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Zscan4cQ80VJ6 506 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Gadl1Q80WP8 550 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 CherpQ8CGZ0 936 aaKnown RBP14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 BicralQ8CHH5 1074 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 ScgnQ91WD9 276 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Nipsnap3bQ9CQE1 247 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Atp5dQ9D3D9 168 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Katnal2Q9D3R6 539 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Rabl3Q9D4V7 236 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Echdc3Q9D7J9 300 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Pcna-ps2A0A140T8V5 261 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Gm5134E9QAB5 671 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 HexdcQ3U4H6 486 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 MyrfQ3UR85 1138 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Plcl1Q3USB7 1096 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Xlr3bQ6P205 226 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Lman1lQ8VCD3 505 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 Tbrg4Q91YM4 630 aaKnown RBP14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 LactbQ9EP89 551 aa14.49□□□□□ -0.09
Col3a1-201ENSMUST00000087883 PlekQ9JHK5 350 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms