RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Rbck1Q9WUB0 508 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 MycsQ9Z304 431 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Plekhg2Q6KAU7 1340 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Rsrc2A2RTL5 376 aaKnown RBP9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm38392E9Q2A2 434 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Fmr1P35922 614 aaKnown RBP9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Cdc25aP48964 514 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Dnaaf3Q3UYV8 586 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Slc9a1Q61165 820 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 EfsQ64355 560 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Btbd11Q6GQW0 1109 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ccdc184Q8BMK5 191 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 RhbgQ8BUX5 455 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Apol10aQ8CCA5 318 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Parp10Q8CIE4 960 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Mill2Q8HWE5 355 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Acad9Q8JZN5 625 aaKnown RBP9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Kiaa0319lQ8K135 1048 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Top1mtQ8R4U6 593 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Agap3Q8VHH5 910 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Cyp4f13Q99N19 523 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 DlstQ9D2G2 454 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Mrps15Q9DC71 258 aaKnown RBP9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tp73Q9JJP2 631 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Atp6v1g2Q9WTT4 118 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Trpc7Q9WVC5 862 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm5799E9Q2M1 201 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Klc2O88448 599 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Cyr61P18406 379 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 PhbP67778 272 aaKnown RBP9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 FapP97321 761 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Sec23aQ01405 765 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Zfp943Q6NZP4 507 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Adat2Q6P6J0 191 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ano6Q6P9J9 911 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Snx13Q6PHS6 957 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 4921511C20RikQ8BVT7 469 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Thap1Q8CHW1 210 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Arfgap2Q99K28 520 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Cisd2Q9CQB5 135 aaKnown RBP9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ints11Q9CWS4 600 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ccdc86Q9JJ89 426 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Spo11Q9WTK8 396 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm7929A0A286YDV3 213 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Atp2c2A7L9Z8 944 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm42791D3YYB5 209 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Svs3aF2Z472 265 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm3015F6ZAP6 213 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm7954F7BAX1 213 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Msr1P30204 458 aaKnown RBP9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Mfsd3Q5U419 412 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Fbxo42Q6PDJ6 717 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Klhl17Q6TDP3 640 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Rassf10Q8BL43 508 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Myef2Q8C854 591 aaKnown RBP9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Nup58Q8R332 587 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gps1Q99LD4 471 aaKnown RBP9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Hes6Q9JHE6 224 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pdpk1Q9Z2A0 559 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Actn3O88990 900 aaKnown RBP9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tpp1O89023 562 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 P04224 255 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Cyp2f2P33267 491 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pcbp1P60335 356 aaKnown RBP9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tlr13Q6R5N8 991 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tmc4Q7TQ65 694 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Hsdl1Q8BTX9 330 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Adipor1Q91VH1 375 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Wrnip1Q91XU0 660 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Slc25a19Q9DAM5 318 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 PolkQ9QUG2 852 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 BlmO88700 1416 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Mettl8A2AUU0 281 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Samsn1P57725 372 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 OtulinQ3UCV8 352 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Carnmt1Q80UY1 400 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Rhpn2Q8BWR8 686 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Arel1Q8CHG5 823 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Rbm12Q8R4X3 992 aaKnown RBP9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 RhovQ8VDU1 236 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Olfr1414Q8VGU5 312 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pcdha9Q91Y11 979 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pcdha8Q91Y12 946 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pcdha6Q91Y14 946 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Eps8l2Q99K30 729 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Akirin1Q99LF1 191 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 PccbQ99MN9 541 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Exoc2Q9D4H1 924 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Sh2d4aQ9D7V1 421 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pdzd4Q9QY39 772 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Opn1mwO35599 359 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Fen1P39749 378 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Rasgrf2P70392 1189 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pou1f1Q00286 291 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Meaf6Q2VPQ9 191 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 RogdiQ3TDK6 287 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Parp3Q3ULW8 533 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 AbrQ5SSL4 859 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 MertkQ60805 994 aa9.32□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Krt33bQ61897 404 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms