RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Stk4Q9JI11 487 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Sh2b2Q9JID9 621 aa10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 PygmQ9WUB3 842 aaKnown RBP10.35□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Cacna1sQ02789 1880 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Gm5737A0A140LI11 423 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Gm16430A6X8J1 155 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Pdzd8B9EJ80 1147 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Guca2bO09051 106 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ccnd1P25322 295 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Pcyt1aP49586 367 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ripk2P58801 539 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 YdjcQ14BV6 310 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Chi3l1Q61362 389 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Tpd52Q62393 224 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Rundc3bQ6PDC0 408 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Wdr91Q7TMQ7 748 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Tigd4Q8BUZ3 513 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Strip2Q8C9H6 844 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Apobec3Q99J72 440 aaKnown RBP10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Eps8l2Q99K30 729 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Slxl1Q9D515 155 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ccdc130Q9D516 385 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 1700123K08RikQ9D991 295 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Zbtb11G5E8B9 1050 aaKnown RBP10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Rtn2O70622 471 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 AfmO89020 608 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 ZbbxQ0P5X5 716 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Syce2Q505B8 171 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ttc7aQ8BGB2 858 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Cox16Q9CR63 106 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 SerhlQ9EPB5 311 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Nfu1Q9QZ23 255 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ptpn4Q9WU22 926 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Gm3173A6NAS3 172 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Itga9B8JK39 1036 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Gm3095E9Q058 166 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Gm3020E9Q3J7 150 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Gm2897K7N6T7 172 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Crabp2P22935 138 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Inpp1P49442 396 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 rp9P97762 213 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 ZufspQ3T9Z9 577 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 TraddQ3U0V2 310 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Cep295nlQ497N6 533 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Baiap2l2Q80Y61 522 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Arhgef19Q8BWA8 802 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Slc44a2Q8BY89 706 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Gm3411Q8C7R2 150 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Fam192aQ91WE2 254 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Mzf1S4R1L6 814 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Slc4a9E9PUP3 929 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Alkbh1P0CB42 389 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Polr1bP70700 1135 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Calb2Q08331 271 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Fam47cQ14BE7 430 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 OsbpQ3B7Z2 805 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Patl1Q3TC46 770 aaKnown RBP10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Krt72Q6IME9 520 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ano5Q75UR0 904 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Kirrel3Q8BR86 778 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Wrap53Q8VC51 532 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Dnajc28Q8VCE1 385 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 HnrnprQ8VHM5 632 aaKnown RBP10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Rgs10Q9CQE5 181 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 BlvraQ9CY64 295 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Rabl3Q9D4V7 236 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 MajinQ9D992 256 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 CrotQ9DC50 612 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Mtmr9Q9Z2D0 545 aa10.34□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Disp2Q8CIP5 1345 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Gm7086A0A1W2P766 342 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mtco1P00397 514 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Lamp1P11438 406 aaKnown RBP10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Cd86P42082 309 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Rad54lP70270 747 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Eps8Q08509 821 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Fdxacb1Q3UY23 622 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Kctd19Q562E2 927 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 HltfQ6PCN7 1003 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Arhgap15Q811M1 481 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 SybuQ8BHS8 665 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Prpf31Q8CCF0 499 aaKnown RBP10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Q9CR55 154 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Katnal2Q9D3R6 539 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Satl1Q9D5N8 744 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Fam122aQ9DB52 284 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 PolkQ9QUG2 852 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 H2afyQ9QZQ8 372 aaKnown RBP10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Scgb2b21A0A087WQA9 112 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Wdr49A0A0N4SUK7 710 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Ccdc144bE9PVZ3 520 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Raph1F2Z3U3 1266 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Irf6P97431 467 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Mief2Q5NCS9 454 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 FdxrQ61578 494 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Rusc1Q8BG26 893 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 EtnpplQ8BWU8 499 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Glra3Q91XP5 464 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Snx2Q9CWK8 519 aa10.33□□□□□ -0.76
Ldlr-201ENSMUST00000034713 Rnf181Q9CY62 165 aa10.33□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms