RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 TbcelQ8C5W3 424 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Zfp655Q9CZP3 541 aaKnown RBP24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Slxl1Q9D515 155 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Gm28897A0A087WP44 222 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Gm21083A0A0G2JFD5 256 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 OmdO35103 423 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Mbl1P39039 239 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 TfamP40630 243 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 NfiaQ02780 532 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Casc4Q6P2L7 435 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Zfp398Q8BV16 643 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Ilf2Q9CXY6 390 aaKnown RBP24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Extl2Q9ES89 330 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Ddx21Q9JIK5 851 aaKnown RBP24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Ppp2r3cQ9JK24 453 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 JcadQ5DTX6 1320 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Gpbp1l1Q6NZP2 473 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Rnf139Q7TMV1 668 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Agap1Q8BXK8 857 aaKnown RBP24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Mrgprx1Q8CIP3 322 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Vmn1r191Q8K4D0 298 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Eif3lQ8QZY1 564 aaKnown RBP24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Rev1Q920Q2 1249 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Gabbr1Q9WV18 960 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Axin1O35625 863 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 PkmP52480 531 aaKnown RBP24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Mars2Q499X9 586 aaKnown RBP24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Rc3h1Q4VGL6 1130 aaKnown RBP24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Sfr1Q8BP27 319 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Fam53cQ8BXQ8 393 aa24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Ptdss1Q99LH2 473 aaKnown RBP24.02■■□□□ 1.44
Sh3rf1-201ENSMUST00000034060 Nme9A0A1L1SUL6 329 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Gm8237E9Q257 205 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Gsdmc2Q2KHK6 480 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Nlrp9cQ66X01 1004 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Lrfn2Q80TG9 788 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Khdc3Q9CWU5 440 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Pik3cgQ9JHG7 1102 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Abcb11Q9QY30 1321 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Klf6O08584 283 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 PigrO70570 771 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Adam15O88839 864 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Prox1P48437 737 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Krt42Q6IFX2 452 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 4921511C20RikQ8BVT7 469 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Depdc5P61460 1591 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Frmd7A2AD83 703 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Pramel3A2AHA7 463 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Gm7903A2AWL1 463 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 AV320801A2AWL3 467 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Gm4312K9J7E2 289 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Gm15023L7MUB4 467 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Lire1P11260 357 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Fkbp1aP26883 108 aaKnown RBP24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Rpl36P47964 105 aaKnown RBP24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 SpoplQ2M2N2 392 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Prkaa2Q8BRK8 552 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Ddx39bQ9Z1N5 428 aaKnown RBP24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Net1Q9Z206 595 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Gm8298J3QPI0 401 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Tmem2Q5FWI3 1383 aa24.01■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 FancfE9Q5Z5 343 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 MafgO54790 162 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Celf1P28659 486 aaKnown RBP24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Phactr1Q2M3X8 580 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 MtrrQ8C1A3 696 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Zfp263Q8CF60 680 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Ing3Q8VEK6 421 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Vps11Q91W86 941 aaKnown RBP24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 CtshP49935 333 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Slc16a1P53986 493 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Arhgap45Q3TBD2 1116 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Trpc5osQ3UHV4 110 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Ces5aQ6AW46 575 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Ccdc32Q8BS39 179 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Kbtbd13Q8C828 458 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Ephb2P54763 986 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Yipf1Q91VU1 306 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 HdcP23738 662 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Ccng1P51945 294 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Rmnd5aQ80YQ8 391 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Fam118bQ8C569 351 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Myoz2Q9JJW5 264 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Pkp3Q9QY23 797 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Mroh4G3X8W1 983 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Zfy2P20662 777 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Tmem59lQ7TNI2 337 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 AagabQ8R2R3 316 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Ppp1r3aQ99MR9 1089 aa24■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Rims2Q9EQZ7 1530 aa23.99■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Nfx1B1AY10 1114 aaKnown RBP23.99■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 CcnjlQ5SRT8 387 aa23.99■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 XpaQ64267 272 aa23.99■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Fam196bQ6GQV1 535 aa23.99■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 B3galnt2Q8BG28 504 aa23.99■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Exd2Q8VEG4 650 aaKnown RBP23.99■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Mzt2Q9CQ25 159 aa23.99■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Kbtbd12Q9D618 625 aa23.99■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 MrrfQ9D6S7 262 aaKnown RBP23.99■■□□□ 1.43
Sh3rf1-201ENSMUST00000034060 Habp4Q9JKS5 411 aaKnown RBP23.99■■□□□ 1.43
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms