RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Slc9b1Q8C0X2 565 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ces4aQ8R0W5 563 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Senp2Q91ZX6 588 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rsl24d1Q99L28 163 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Kdm8Q9CXT6 414 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ndel1Q9ERR1 345 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Extl2Q9ES89 330 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sh2d3cQ9QZS8 854 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ap4b1Q9WV76 738 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Trim15G3UY57 292 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Hspa1bP17879 642 aaKnown RBP10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Eif2s1Q6ZWX6 315 aaKnown RBP10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Peg10Q7TN75 958 aaKnown RBP10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tesk2Q8VCT9 570 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Man1a1P45700 655 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Znf746Q3U133 652 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gm5414Q6IFZ8 552 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Armc12Q80X86 340 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gpsm2Q8VDU0 679 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Serpina3nQ91WP6 418 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Crtc3Q91X84 619 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zcrb1Q9CZ96 217 aaKnown RBP10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 ParvbQ9ES46 365 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gm8237E9Q257 205 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Eddm13E9Q7F5 164 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 AfmO89020 608 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Fam20cQ5MJS3 579 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Phf23Q8BSN5 401 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sfrp1Q8C4U3 314 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Atg14Q8CDJ3 492 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sept8Q8CHH9 429 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ndufv1Q91YT0 464 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Trpd52l3Q9CQ14 231 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Mtmr1Q9Z2C4 669 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 MetP16056 1379 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Plekhg4A0A1L1SU27 1217 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rpl36P47964 105 aaKnown RBP10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Dcaf15Q6PFH3 600 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 BfarQ8R079 450 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ilf2Q9CXY6 390 aaKnown RBP10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Clvs1Q9D4C9 354 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tubgcp4Q9D4F8 667 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Slc25a13Q9QXX4 676 aa10.53□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zfp846G3X996 541 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Serpinb9O08797 374 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 PkmP52480 531 aaKnown RBP10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Q32P12 615 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Krt2Q3TTY5 707 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ccdc51Q3URS9 406 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tmc4Q7TQ65 694 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Stard7Q8R1R3 373 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Efhc1Q9D9T8 648 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 DiabloQ9JIQ3 237 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Coro1cQ9WUM4 474 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Grk1Q9WVL4 564 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 XdhQ00519 1335 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cdc42bpbQ7TT50 1713 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gm20509G3UZF1 325 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cyp2e1Q05421 493 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Dnal1Q05A62 190 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ttbk2Q3UVR3 1243 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Fbxo39Q5NBU5 443 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 FdxrQ61578 494 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Vps50Q8CI71 964 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Acat1Q8QZT1 424 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Echdc3Q9D7J9 300 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tmem59Q9QY73 323 aa10.52□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tbkbp1A2A9T0 611 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Birc5O70201 140 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Grk4O70291 574 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Alkbh1P0CB42 389 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pou4f1P17208 421 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ythdf1P59326 559 aaKnown RBP10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 LxnP70202 222 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ptprn2P80560 1001 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Cdk7Q03147 346 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gtpbp6Q3U6U5 514 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ceacam5Q3UKK2 947 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 UrgcpQ5NCI0 926 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Otud6aQ6IE21 290 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Arhgap28Q8BN58 729 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ppp4r4Q8C0Y0 875 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Olfr615Q8VGY4 313 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tbrg4Q91YM4 630 aaKnown RBP10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Sec23aQ01405 765 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ccdc85bQ6PDY0 202 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Otub1Q7TQI3 271 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Nat14Q8BVG8 206 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Trim33Q99PP7 1142 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Stx11Q9D3G5 287 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Msh5Q9QUM7 833 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 March10E9PX79 788 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tmem132bF7BAB2 1078 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm5814J3QP80 125 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Celf1P28659 486 aaKnown RBP10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Eepd1Q3TGW2 569 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Dph1Q5NCQ5 438 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Nqo1Q64669 274 aa10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gemin4Q6P6L6 1058 aaKnown RBP10.52□□□□□ -0.73
Ubr1-201ENSMUST00000028728 P2ry10Q8BFU7 328 aa10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms