RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Sf3a3Q9D554 501 aaKnown RBP8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Olfr456B2RT27 312 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Trim5E9PV98 497 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 4930544D05RikJ3QK56 214 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Vps4bP46467 444 aaKnown RBP8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Mark3Q03141 753 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Foxd1Q61345 456 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Adat2Q6P6J0 191 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Eif2aQ8BJW6 581 aaKnown RBP8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Stau2Q8CJ67 570 aaKnown RBP8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Ccdc137Q8R0K4 290 aaKnown RBP8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Olfr458Q8VF80 313 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Olfr457Q8VGP5 313 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 MycbpQ9EQS3 103 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 IvdQ9JHI5 424 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Prmt2Q9R144 448 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Smim10l2aA0A0B4J1F8 78 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Cdr2lA2A6T1 465 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Fbxo41Q6NS60 873 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Grik4Q8BMF5 956 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 GancQ8BVW0 898 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Uba3Q8C878 462 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Angel2Q8K1C0 544 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Olfr1499Q8VG65 314 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Rap1gapA2ALS5 663 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Arhgap42B2RQE8 841 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 R3hdm1E9Q9Q2 1135 aaKnown RBP8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Vmn2r15L7N2A0 855 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Nr3c1P06537 783 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Pou2f2Q00196 463 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 OgdhQ60597 1023 aaKnown RBP8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Krt32Q62168 407 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Tmc8Q7TN58 722 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Smtnl2Q8CI12 456 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Dennd1aQ8K382 1016 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 PhykplQ8R1K4 467 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Epn3Q91W69 636 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Tekt2Q922G7 430 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Rnf135Q9CWS1 417 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 AspgA0JNU3 564 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Lrriq4A6H6A4 596 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 E230025N22RikG5E8S3 482 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Pold2O35654 469 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 FlgP11088 336 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Dupd1Q8BK84 215 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 PotegA5H0M4 473 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Akap5D3YVF0 745 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Ap2a2P17427 938 aaKnown RBP8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Cdca2Q14B71 982 aaKnown RBP8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Mpzl3Q3V3F6 237 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Tdrd5Q5VCS6 1040 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 LnpkQ7TQ95 425 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 BlmhQ8R016 455 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Ero1aQ8R180 464 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 NonoQ99K48 473 aaKnown RBP8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Gps1Q99LD4 471 aaKnown RBP8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Abcg3Q99P81 650 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Spata31d1aE9QA35 1336 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Olfr1354E9Q5G9 310 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 PtpreP49446 699 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Q3UE31 404 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Snx27Q3UHD6 539 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Myo1gQ5SUA5 1024 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Nlrp14Q6B966 993 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Stk38lQ7TSE6 464 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 C2cd2lQ80X80 706 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Dcun1d2Q8BZJ7 259 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Bcas3Q8CCN5 928 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Kdm1bQ8CIG3 826 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Pcdha2Q91Y17 948 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Senp2Q91ZX6 588 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Cox16Q9CR63 106 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Thg1lQ9CY52 298 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Q9D2Q3 444 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Trim54Q9ERP3 366 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Il21rQ9JHX3 529 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Aldh18a1Q9Z110 795 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Chd5A2A8L1 1946 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Apol8A2VDH7 339 aaKnown RBP8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Vwa5b1A9Z1V5 1215 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Dpysl4O35098 572 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 JchainP01592 159 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Ass1P16460 412 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Gja8P28236 440 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Scg3P47867 471 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Casp7P97864 303 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Igsf9Q05BQ1 1179 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Mettl17Q3U2U7 461 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 UrgcpQ5NCI0 926 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 CgasQ8C6L5 507 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Arhgap29Q8CGF1 1266 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Ppp4r1Q8K2V1 951 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Grhl1Q921D9 618 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Zmynd10Q99ML0 440 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Prl2a1Q9JHK0 228 aa8.86□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Gm29554A0A087WNW4 188 aa8.85□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Apold1E9Q0X2 246 aa8.85□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 AunipE9Q6Z5 340 aa8.85□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Ppargc1aO70343 797 aa8.85□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Cd86P42082 309 aa8.85□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms