RNA–Protein interactions for RNA: ENSMUST00000020200.13

Cfap54-201, Transcript of Cilia- and flagella-associated protein 54, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cfap54, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54-201ENSMUST00000020200 Bbs5Q9CZQ9 341 aa11.48□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Lrrc71Q9D3W5 558 aa11.48□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Psmg1Q9JK23 289 aa11.48□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Znhit2Q9QY66 399 aa11.48□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Nfu1Q9QZ23 255 aa11.48□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Trpc2Q9R244 1172 aa11.48□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Zbtb12Q9Z150 459 aa11.48□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Lonrf1D3YY23 762 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Slc4a9E9PUP3 929 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Apold1E9Q0X2 246 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Pkn1P70268 946 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Kiaa1328Q6NZK5 612 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 L3mbtl3Q8BLB7 883 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 RalylQ8BTF8 293 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Slc9a4Q8BUE1 797 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Gpc3Q8CFZ4 579 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 UvragQ8K245 698 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Kdelr1Q99JH8 212 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Pcyox1Q9CQF9 505 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 GOLGA7BQ9D428 167 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Caln1Q9JJG7 219 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Msgn1Q9JK54 188 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Iigp1Q9QZ85 413 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Rfwd2Q9R1A8 733 aaKnown RBP11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Cetn2Q9R1K9 172 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Sgk1Q9WVC6 431 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Zfp715G3X9T1 886 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 VimP20152 466 aaKnown RBP11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Tbxas1P36423 533 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 ZbbxQ0P5X5 716 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Ugt3a1Q3UP75 523 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Elf3Q3UPW2 391 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Mybpc2Q5XKE0 1136 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 HnrnpdQ60668 355 aaKnown RBP11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Traf3Q60803 567 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Afg3l1Q920A7 789 aaKnown RBP11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Sec14l2Q99J08 403 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Mcrs1Q99L90 462 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Zmynd10Q99ML0 440 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Isl2Q9CXV0 359 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Polr3eQ9CZT4 710 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 1700123K08RikQ9D991 295 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Smok2bQ9QYZ3 484 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Smok2aQ9QYZ6 504 aa11.47□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Gm4302E9PX25 294 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Apol11aE9PZG0 334 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Gm3460E9QAI8 215 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 AlpiF8VPQ6 554 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Top6blJ3QMY9 579 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Lmo2P25801 158 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Kif5cP28738 956 aaKnown RBP11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Ercc5P35689 1170 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Gm29609Q3UU56 907 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Cfhr2Q4LDF6 332 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 PighQ5M9N4 188 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 StilQ60988 1262 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Gja6Q6S5G4 283 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Prl3a1Q78Y73 227 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 C2cd5Q7TPS5 1016 aaKnown RBP11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Usp6nlQ80XC3 819 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Gtf3c2Q8BL74 907 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Kat14Q8CID0 779 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Lrrc14Q8VC16 493 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Fubp1Q91WJ8 651 aaKnown RBP11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Pcdha3Q91Y16 942 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Q922R1 422 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Dpp3Q99KK7 738 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Kdm8Q9CXT6 414 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 AvenQ9D9K3 342 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Tmem174Q9DCX7 243 aa11.46□□□□□ -0.57
Cfap54-201ENSMUST00000020200 Zmynd8A2A484 1235 aaKnown RBP11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Tbc1d16A2ABG4 766 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Gm382B1AXN3 1250 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Nek2O35942 443 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Trappc3O55013 180 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Aff1O88573 1216 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 AmhP27106 555 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Dynlt1P51807 113 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Pde1bQ01065 535 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 VcpQ01853 806 aaKnown RBP11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Igsf9Q05BQ1 1179 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Znf185Q62394 352 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Scube3Q66PY1 993 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Wdr44Q6NVE8 915 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Sh3tc2Q80VA5 1289 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Dupd1Q8BK84 215 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Vps37cQ8R105 352 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Setd3Q91WC0 594 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 YarsQ91WQ3 528 aaKnown RBP11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 SncaipQ99ME3 962 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Pck1Q9Z2V4 622 aa11.46□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Gm42715A0A087WP63 3095 aaKnown RBP11.45□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Patl2A2ARM1 529 aa11.45□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Pdzrn4E9PUZ9 1014 aa11.45□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Trim5E9PV98 497 aa11.45□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Gabrb2P63137 512 aa11.45□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Tmprss15P97435 1069 aa11.45□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Col6a1Q04857 1025 aa11.45□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Ect2Q07139 913 aa11.45□□□□□ -0.58
Cfap54-201ENSMUST00000020200 Nsun2Q1HFZ0 757 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms