RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Dnali1Q8BVN8 258 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Klhl36Q8R124 613 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Fam49bQ921M7 324 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Serpinb3bQ9D1Q5 387 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 AuhQ9JLZ3 314 aa13.3□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Ankfn1A0A140LIW7 1083 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Prl6a1O35257 230 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 RarbP22605 482 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Cyp2c67Q569X9 491 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Gngt2Q61017 69 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Cdc14aQ6GQT0 603 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 HpseQ6YGZ1 535 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Atp6v0d2Q80SY3 350 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Daam1Q8BPM0 1077 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Hdac7Q8C2B3 938 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Olfr397Q8VEZ6 315 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Actrt1Q9D9J3 376 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Gipc1Q9Z0G0 333 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 RecqlQ9Z129 648 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Atp8b4A2ANX3 1194 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Zbed6D2EAC2 980 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 PolgP54099 1218 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Olfm3P63056 478 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Tigd5Q499M4 642 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Basp1Q91XV3 226 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Tbrg4Q91YM4 630 aaKnown RBP13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Sgf29Q9DA08 293 aaKnown RBP13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rbp7Q9EPC5 134 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Cst8P32766 142 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Tgfbrap1Q3UR70 860 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Foxred2Q3USW5 665 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Caprin1Q60865 707 aaKnown RBP13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Btbd9Q8C726 612 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Lars2Q8VDC0 902 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Kif19Q99PT9 997 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 CygbQ9CX80 190 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 CacybpQ9CXW3 229 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 DcpsQ9DAR7 338 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Shcbp1Q9Z179 668 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Pdpk1Q9Z2A0 559 aa13.29□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Zfp612A0A1D5RMC2 672 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rap1gapA2ALS5 663 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Unc13dB2RUP2 1085 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Spin2fJ3QPU0 254 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Gas1Q01721 343 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Samd11Q1RNF8 542 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Gm4952Q5FW57 296 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Als2clQ60I26 952 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Arl13bQ640N2 427 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Olfr670Q7TRP3 312 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Sh3kbp1Q8R550 709 aaKnown RBP13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Gabbr1Q9WV18 960 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Ccnd2P30280 289 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Ndufs6P52503 116 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Uchl4P58321 233 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 PhexP70669 749 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Gm3414Q3TNU4 584 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Pik3r5Q5SW28 871 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Cd180Q62192 661 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Acot5Q6Q2Z6 421 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Usp1Q8BJQ2 784 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Olfr615Q8VGY4 313 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Hars2Q99KK9 505 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 GrapQ9CX99 217 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rasgrp2Q9QUG9 608 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Hcn2O88703 863 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Bend4P86174 541 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Pyroxd1Q3TMV7 498 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Krt26Q3TRJ4 462 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Fbxo39Q5NBU5 443 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Itih3Q61704 889 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Dpysl3Q62188 570 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Six2Q62232 296 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Nudt16Q6P3D0 195 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Dclk2Q6PGN3 756 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Gpr151Q7TSN6 422 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Fam49aQ8BHZ0 323 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Plcb4Q91UZ1 1175 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Arl8bQ9CQW2 186 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rnaseh2aQ9CWY8 301 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 NagaQ9QWR8 415 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Krt16Q9Z2K1 469 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Myh10Q61879 1976 aaKnown RBP13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Gm1141B9EJU1 475 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Slc4a9E9PUP3 929 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Ccdc62E9PVD1 701 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Tp53P02340 387 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rab17P35292 214 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 BtkP35991 659 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Pih1d3Q3KNI6 218 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Rbm20Q3UQS8 1199 aaKnown RBP13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Skap1Q3UUV5 355 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Fam160a1Q505K2 1081 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Myl6Q60605 151 aaKnown RBP13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Ccdc151Q8BSN3 593 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Dus1lQ8C2P3 475 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Msi2Q920Q6 346 aaKnown RBP13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Fam227aQ9D3V8 625 aa13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Ddx39bQ9Z1N5 428 aaKnown RBP13.28□□□□□ -0.28
Clcn3-201ENSMUST00000004430 Itga9B8JK39 1036 aa13.27□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms