RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 MMS2P53152 137 aa-4.38□□□□□ -3.11
snR53snR53 PAM18Q07914 168 aa-4.38□□□□□ -3.11
snR53snR53 MPD1Q12404 318 aaKnown RBP-4.38□□□□□ -3.11
snR53snR53 LIP1Q03579 150 aa-4.39□□□□□ -3.11
snR53snR53 YPR153WQ06537 140 aa-4.39□□□□□ -3.11
snR53snR53 RFU1Q08003 200 aa-4.4□□□□□ -3.11
snR53snR53 MRPL37P36532 105 aa-4.41□□□□□ -3.12
snR53snR53 YEL028WP39989 153 aa-4.41□□□□□ -3.12
snR53snR53 EGD1Q02642 157 aaKnown RBP-4.41□□□□□ -3.12
snR53snR53 AIM34Q03673 198 aa-4.41□□□□□ -3.12
snR53snR53 YOR214CQ12282 236 aa-4.41□□□□□ -3.12
snR53snR53 TRM3Q07527 1436 aa-4.41□□□□□ -3.12
snR53snR53 XPT1P47165 209 aa-4.42□□□□□ -3.12
snR53snR53 ATG10Q07879 167 aa-4.42□□□□□ -3.12
snR53snR53 SEC7P11075 2009 aaKnown RBP-4.43□□□□□ -3.12
snR53snR53 ANB1P19211 157 aa-4.43□□□□□ -3.12
snR53snR53 SPS18P32572 300 aa-4.43□□□□□ -3.12
snR53snR53 LDB7P38210 180 aa-4.43□□□□□ -3.12
snR53snR53 YNL198CP40166 100 aa-4.43□□□□□ -3.12
snR53snR53 YNL194CP40169 301 aa-4.43□□□□□ -3.12
snR53snR53 IRC18P47056 224 aa-4.43□□□□□ -3.12
snR53snR53 FMP27Q06179 2628 aa-4.43□□□□□ -3.12
snR53snR53 RPL40AP0CH08 128 aaKnown RBP-4.44□□□□□ -3.12
snR53snR53 RPL40BP0CH09 128 aaKnown RBP-4.44□□□□□ -3.12
snR53snR53 CYC2P38909 366 aa-4.44□□□□□ -3.12
snR53snR53 IRC19Q07843 230 aa-4.44□□□□□ -3.12
snR53snR53 MED11Q99278 115 aa-4.44□□□□□ -3.12
snR53snR53 URB1P34241 1764 aaKnown RBP-4.45□□□□□ -3.12
snR53snR53 YNL200CP40165 246 aaKnown RBP-4.45□□□□□ -3.12
snR53snR53 RCF2P53721 224 aa-4.45□□□□□ -3.12
snR53snR53 YPR114WQ06107 315 aa-4.45□□□□□ -3.12
snR53snR53 UTP11P34247 250 aaPredicted RBP-4.46□□□□□ -3.12
snR53snR53 FES1P38260 290 aa-4.46□□□□□ -3.12
snR53snR53 HUT1Q12520 339 aa-4.46□□□□□ -3.12
snR53snR53 PFY1P07274 126 aa-4.47□□□□□ -3.13
snR53snR53 SRP21P32342 167 aa-4.48□□□□□ -3.13
snR53snR53 PHS1P40857 217 aa-4.48□□□□□ -3.13
snR53snR53 RUB1Q03919 77 aa-4.48□□□□□ -3.13
snR53snR53 OCA6Q12454 224 aa-4.48□□□□□ -3.13
snR53snR53 PLP1Q04004 230 aa-4.49□□□□□ -3.13
snR53snR53 YGR240C-AQ3E786 66 aa-4.49□□□□□ -3.13
snR53snR53 YPR014CQ6B0W2 109 aa-4.49□□□□□ -3.13
snR53snR53 SPA2P23201 1466 aaKnown RBP-4.49□□□□□ -3.13
snR53snR53 DYN1P36022 4092 aa-4.5□□□□□ -3.13
snR53snR53 BNA6P43619 295 aa-4.5□□□□□ -3.13
snR53snR53 TIM13P53299 105 aa-4.5□□□□□ -3.13
snR53snR53 YMR31P19955 123 aa-4.51□□□□□ -3.13
snR53snR53 YDR246W-AQ3E763 66 aa-4.51□□□□□ -3.13
snR53snR53 TOR2P32600 2474 aaKnown RBP-4.52□□□□□ -3.13
snR53snR53 HHO1P53551 258 aa-4.52□□□□□ -3.13
snR53snR53 PGA1P53896 198 aa-4.52□□□□□ -3.13
snR53snR53 YRF1-6P53819 1859 aa-4.52□□□□□ -3.13
snR53snR53 RAD9P14737 1309 aa-4.52□□□□□ -3.13
snR53snR53 TY1B-LR3P0C2I6 1755 aaKnown RBP-4.53□□□□□ -3.13
snR53snR53 TY1B-PR3P0C2J1 1755 aaKnown RBP-4.53□□□□□ -3.13
snR53snR53 STF1P01098 86 aa-4.53□□□□□ -3.13
snR53snR53 GPI2P46961 280 aa-4.53□□□□□ -3.13
snR53snR53 THP2O13539 261 aaKnown RBP-4.54□□□□□ -3.14
snR53snR53 GCV3P39726 170 aaPredicted RBP-4.54□□□□□ -3.14
snR53snR53 YNR064CP53750 290 aa-4.54□□□□□ -3.14
snR53snR53 YNL184CP53876 108 aa-4.54□□□□□ -3.14
snR53snR53 YIL134C-AQ45U18 67 aa-4.55□□□□□ -3.14
snR53snR53 COX23P38824 151 aa-4.56□□□□□ -3.14
snR53snR53 ATP14Q12349 124 aa-4.56□□□□□ -3.14
snR53snR53 GCN1P33892 2672 aaKnown RBP-4.58□□□□□ -3.14
snR53snR53 MATALPHA1P0CY06 175 aa-4.59□□□□□ -3.14
snR53snR53 HMLALPHA1P0CY07 175 aa-4.59□□□□□ -3.14
snR53snR53 SRP102P36057 244 aaPredicted RBP-4.59□□□□□ -3.14
snR53snR53 HKR1P41809 1802 aa-4.6□□□□□ -3.15
snR53snR53 YIL163CP40448 117 aa-4.6□□□□□ -3.15
snR53snR53 ENV10Q99382 181 aa-4.6□□□□□ -3.15
snR53snR53 VMA6P32366 345 aaKnown RBP-4.61□□□□□ -3.15
snR53snR53 VMA10P48836 114 aaKnown RBP-4.61□□□□□ -3.15
snR53snR53 YLR283WQ05867 314 aa-4.61□□□□□ -3.15
snR53snR53 YLR255CO13574 117 aa-4.62□□□□□ -3.15
snR53snR53 MRS4P23500 304 aa-4.63□□□□□ -3.15
snR53snR53 HPA2Q06592 156 aa-4.63□□□□□ -3.15
snR53snR53 LDB18Q07887 179 aa-4.63□□□□□ -3.15
snR53snR53 SNT2P53127 1403 aa-4.63□□□□□ -3.15
snR53snR53 COX5BP00425 151 aa-4.64□□□□□ -3.15
snR53snR53 ADK1P07170 222 aaKnown RBP-4.64□□□□□ -3.15
snR53snR53 YBR121C-AP0C5L4 52 aa-4.64□□□□□ -3.15
snR53snR53 CBT1P36038 271 aaPredicted RBP-4.64□□□□□ -3.15
snR53snR53 TTI2P47168 421 aa-4.64□□□□□ -3.15
snR53snR53 RAV2Q03956 351 aa-4.64□□□□□ -3.15
snR53snR53 YLR296WQ05898 108 aa-4.64□□□□□ -3.15
snR53snR53 YKL183C-AQ3E765 70 aa-4.64□□□□□ -3.15
snR53snR53 HPM1P40481 377 aa-4.65□□□□□ -3.15
snR53snR53 TPM1P17536 199 aaKnown RBP-4.66□□□□□ -3.16
snR53snR53 YDR102CQ03864 110 aa-4.66□□□□□ -3.16
snR53snR53 HYM1P32464 399 aa-4.67□□□□□ -3.16
snR53snR53 RTC3P38804 111 aaPredicted RBP-4.67□□□□□ -3.16
snR53snR53 YGL193CP53097 103 aa-4.67□□□□□ -3.16
snR53snR53 NUF2P33895 451 aa-4.68□□□□□ -3.16
snR53snR53 IKI1P38874 309 aa-4.69□□□□□ -3.16
snR53snR53 YER121WP40076 114 aa-4.7□□□□□ -3.16
snR53snR53 YPL067CQ02754 198 aa-4.7□□□□□ -3.16
snR53snR53 SRL4Q03085 281 aa-4.7□□□□□ -3.16
snR53snR53 YDR381C-AQ3E6R5 114 aa-4.7□□□□□ -3.16
snR53snR53 GSP1P32835 219 aaKnown RBP-4.71□□□□□ -3.16
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms