RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C HSP12P22943 109 aaKnown RBP1.19□□□□□ -2.22
CUP9YPL177C AHT1P29589 182 aa1.19□□□□□ -2.22
CUP9YPL177C SHB17P36136 271 aaKnown RBP1.19□□□□□ -2.22
CUP9YPL177C YBR242WP38331 238 aa1.19□□□□□ -2.22
CUP9YPL177C CYC2P38909 366 aa1.19□□□□□ -2.22
CUP9YPL177C CIN5P40917 295 aa1.19□□□□□ -2.22
CUP9YPL177C GPI2P46961 280 aa1.19□□□□□ -2.22
CUP9YPL177C EST3Q03096 181 aa1.19□□□□□ -2.22
CUP9YPL177C CSN9Q03981 162 aa1.19□□□□□ -2.22
CUP9YPL177C SCS22Q6Q595 175 aa1.19□□□□□ -2.22
CUP9YPL177C RPC19P28000 142 aaKnown RBP1.18□□□□□ -2.22
CUP9YPL177C POP7P38291 140 aa1.18□□□□□ -2.22
CUP9YPL177C GLC8P41818 229 aa1.18□□□□□ -2.22
CUP9YPL177C YGL204CP53089 101 aa1.18□□□□□ -2.22
CUP9YPL177C YGR039WP53225 103 aa1.18□□□□□ -2.22
CUP9YPL177C FMN1Q03778 218 aa1.18□□□□□ -2.22
CUP9YPL177C AVO2Q04749 426 aa1.18□□□□□ -2.22
CUP9YPL177C IRC19Q07843 230 aa1.18□□□□□ -2.22
CUP9YPL177C ADE6P38972 1358 aaKnown RBP1.18□□□□□ -2.22
CUP9YPL177C SPA2P23201 1466 aaKnown RBP1.18□□□□□ -2.22
CUP9YPL177C RPL37BP51402 88 aaKnown RBP1.17□□□□□ -2.22
CUP9YPL177C YGR042WP53227 271 aa1.17□□□□□ -2.22
CUP9YPL177C RCF2P53721 224 aa1.17□□□□□ -2.22
CUP9YPL177C ATP19P81451 68 aa1.17□□□□□ -2.22
CUP9YPL177C NMA1Q06178 401 aaKnown RBP1.17□□□□□ -2.22
CUP9YPL177C RIB3Q99258 208 aa1.17□□□□□ -2.22
CUP9YPL177C TAF2P23255 1407 aa1.16□□□□□ -2.22
CUP9YPL177C MRPL15P36523 253 aa1.16□□□□□ -2.22
CUP9YPL177C PHB1P40961 287 aa1.16□□□□□ -2.22
CUP9YPL177C YGL230CP53074 147 aa1.16□□□□□ -2.22
CUP9YPL177C HHO1P53551 258 aa1.16□□□□□ -2.22
CUP9YPL177C KEI1Q06346 221 aa1.16□□□□□ -2.22
CUP9YPL177C YPR203WQ08994 102 aa1.16□□□□□ -2.22
CUP9YPL177C YGL041W-AP0C5N3 154 aa1.15□□□□□ -2.23
CUP9YPL177C SUI1P32911 108 aaKnown RBP1.15□□□□□ -2.23
CUP9YPL177C VMA10P48836 114 aaKnown RBP1.15□□□□□ -2.23
CUP9YPL177C CMC4Q3E7A9 73 aa1.15□□□□□ -2.23
CUP9YPL177C ECM5Q03214 1411 aa1.15□□□□□ -2.23
CUP9YPL177C HSP150P32478 413 aa1.14□□□□□ -2.23
CUP9YPL177C YHR140WP38842 239 aa1.14□□□□□ -2.23
CUP9YPL177C YEL014CP39999 101 aa1.14□□□□□ -2.23
CUP9YPL177C SPC3Q12133 184 aa1.14□□□□□ -2.23
CUP9YPL177C YLR361C-AQ3E795 98 aa1.14□□□□□ -2.23
CUP9YPL177C SLH1P53327 1967 aaKnown RBP1.14□□□□□ -2.23
CUP9YPL177C PRE1P22141 198 aaKnown RBP1.13□□□□□ -2.23
CUP9YPL177C SUA7P29055 345 aaPredicted RBP1.13□□□□□ -2.23
CUP9YPL177C YHL037CP38733 133 aa1.13□□□□□ -2.23
CUP9YPL177C YFL051CP43552 160 aa1.13□□□□□ -2.23
CUP9YPL177C SPG1P50088 95 aa1.13□□□□□ -2.23
CUP9YPL177C YCL001W-AP87012 153 aa1.13□□□□□ -2.23
CUP9YPL177C SPC24Q04477 213 aa1.13□□□□□ -2.23
CUP9YPL177C ATP14Q12349 124 aa1.13□□□□□ -2.23
CUP9YPL177C KIN28P06242 306 aa1.12□□□□□ -2.23
CUP9YPL177C YKR070WP36151 352 aaKnown RBP1.12□□□□□ -2.23
CUP9YPL177C ECM31P38122 312 aa1.12□□□□□ -2.23
CUP9YPL177C PRS3P38689 320 aaKnown RBP1.12□□□□□ -2.23
CUP9YPL177C APS3P47064 194 aa1.12□□□□□ -2.23
CUP9YPL177C LSM8P47093 109 aaKnown RBP1.12□□□□□ -2.23
CUP9YPL177C DIE2P50076 525 aa1.12□□□□□ -2.23
CUP9YPL177C YNL019CP53975 284 aa1.12□□□□□ -2.23
CUP9YPL177C FIT1Q04433 528 aa1.12□□□□□ -2.23
CUP9YPL177C YDR278CQ05612 105 aa1.12□□□□□ -2.23
CUP9YPL177C YPR153WQ06537 140 aa1.12□□□□□ -2.23
CUP9YPL177C RAD50P12753 1312 aa1.12□□□□□ -2.23
CUP9YPL177C CDC39P25655 2108 aaKnown RBP1.12□□□□□ -2.23
CUP9YPL177C COX5BP00425 151 aa1.11□□□□□ -2.23
CUP9YPL177C YER188C-AP0C0V2 99 aa1.11□□□□□ -2.23
CUP9YPL177C RPS1BP23248 255 aaKnown RBP1.11□□□□□ -2.23
CUP9YPL177C RPL14AP36105 138 aaKnown RBP1.11□□□□□ -2.23
CUP9YPL177C TRS20P38334 175 aa1.11□□□□□ -2.23
CUP9YPL177C RPS20P38701 121 aaKnown RBP1.11□□□□□ -2.23
CUP9YPL177C RPL14BP38754 138 aaKnown RBP1.11□□□□□ -2.23
CUP9YPL177C IPT1P38954 527 aa1.11□□□□□ -2.23
CUP9YPL177C HPM1P40481 377 aa1.11□□□□□ -2.23
CUP9YPL177C EMC4P53073 190 aa1.11□□□□□ -2.23
CUP9YPL177C YGR017WP53210 297 aa1.11□□□□□ -2.23
CUP9YPL177C TIM8P57744 87 aa1.11□□□□□ -2.23
CUP9YPL177C SOM1Q05676 74 aa1.11□□□□□ -2.23
CUP9YPL177C GPI11Q06636 219 aa1.11□□□□□ -2.23
CUP9YPL177C LCL2Q08045 131 aa1.11□□□□□ -2.23
CUP9YPL177C YOR385WQ08909 290 aa1.11□□□□□ -2.23
CUP9YPL177C FCY1Q12178 158 aa1.11□□□□□ -2.23
CUP9YPL177C RPO41P13433 1351 aaKnown RBP1.1□□□□□ -2.23
CUP9YPL177C FMP49A0A023PZB3 126 aa1.1□□□□□ -2.23
CUP9YPL177C NHP6AP11632 93 aaKnown RBP1.1□□□□□ -2.23
CUP9YPL177C FYV5P25585 152 aa1.1□□□□□ -2.23
CUP9YPL177C RPS1AP33442 255 aaKnown RBP1.1□□□□□ -2.23
CUP9YPL177C YBR027CP38220 110 aa1.1□□□□□ -2.23
CUP9YPL177C DYN2Q02647 92 aa1.1□□□□□ -2.23
CUP9YPL177C ELC1Q03071 99 aa1.1□□□□□ -2.23
CUP9YPL177C TVP18Q04767 167 aa1.1□□□□□ -2.23
CUP9YPL177C CNL1Q06333 122 aa1.1□□□□□ -2.23
CUP9YPL177C RAF1Q06891 181 aa1.1□□□□□ -2.23
CUP9YPL177C HUT1Q12520 339 aa1.1□□□□□ -2.23
CUP9YPL177C YNL277W-AQ3E7Z0 62 aa1.1□□□□□ -2.23
CUP9YPL177C YCR050CP25630 102 aa1.09□□□□□ -2.23
CUP9YPL177C HYM1P32464 399 aa1.09□□□□□ -2.23
CUP9YPL177C ATG8P38182 117 aaRIP-Chip data1.09□□□□□ -2.23not detected
CUP9YPL177C DCV1P43595 202 aa1.09□□□□□ -2.23
CUP9YPL177C MHF1Q3E835 90 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms