RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W YGR017WP53210 297 aa1.86□□□□□ -2.11
SEC16YPL085W FHN1P53279 174 aa1.86□□□□□ -2.11
SEC16YPL085W NRM1P53718 249 aa1.86□□□□□ -2.11
SEC16YPL085W ATG41Q12048 136 aa1.86□□□□□ -2.11
SEC16YPL085W YLR307C-AQ3E825 87 aa1.86□□□□□ -2.11
SEC16YPL085W RPL26AP05743 127 aaKnown RBP1.86□□□□□ -2.11
SEC16YPL085W YCR100CP25606 316 aa1.86□□□□□ -2.11
SEC16YPL085W WSC4P38739 605 aa1.86□□□□□ -2.11
SEC16YPL085W ATF1P40353 525 aa1.86□□□□□ -2.11
SEC16YPL085W YFL019CP43576 117 aa1.86□□□□□ -2.11
SEC16YPL085W SCW11P53189 542 aa1.86□□□□□ -2.11
SEC16YPL085W RPL26BP53221 127 aaKnown RBP1.86□□□□□ -2.11
SEC16YPL085W IMP1P28627 190 aa1.86□□□□□ -2.11
SEC16YPL085W SUT1P53032 299 aaKnown RBP1.86□□□□□ -2.11
SEC16YPL085W ABF2Q02486 183 aa1.86□□□□□ -2.11
SEC16YPL085W EST3Q03096 181 aa1.86□□□□□ -2.11
SEC16YPL085W PAU23Q07987 124 aa1.86□□□□□ -2.11
SEC16YPL085W YDL009CQ12210 107 aa1.86□□□□□ -2.11
SEC16YPL085W PAU17Q12370 124 aa1.86□□□□□ -2.11
SEC16YPL085W YGR035W-AQ45U48 73 aa1.86□□□□□ -2.11
SEC16YPL085W VAR1P02381 398 aa1.86□□□□□ -2.11
SEC16YPL085W RPS13P05756 151 aaKnown RBP1.86□□□□□ -2.11
SEC16YPL085W CNB1P25296 175 aa1.86□□□□□ -2.11
SEC16YPL085W SDH8P38345 138 aa1.86□□□□□ -2.11
SEC16YPL085W IMD2P38697 523 aaKnown RBP1.86□□□□□ -2.11
SEC16YPL085W YER076CP40049 302 aa1.86□□□□□ -2.11
SEC16YPL085W YGR219WP53307 113 aa1.86□□□□□ -2.11
SEC16YPL085W RIM9Q04734 239 aa1.86□□□□□ -2.11
SEC16YPL085W SCW10Q04951 389 aa1.86□□□□□ -2.11
SEC16YPL085W ERG24P32462 438 aaKnown RBP1.86□□□□□ -2.11
SEC16YPL085W PTR3P43606 678 aa1.86□□□□□ -2.11
SEC16YPL085W YMR175W-AQ3E766 64 aa1.86□□□□□ -2.11
SEC16YPL085W YBR182C-AQ8TGU6 64 aa1.86□□□□□ -2.11
SEC16YPL085W NTF2P33331 125 aaKnown RBP1.85□□□□□ -2.11
SEC16YPL085W RPA43P46669 326 aa1.85□□□□□ -2.11
SEC16YPL085W TAD2P47058 250 aa1.85□□□□□ -2.11
SEC16YPL085W ODC1Q03028 310 aa1.85□□□□□ -2.11
SEC16YPL085W MIX14Q04341 121 aa1.85□□□□□ -2.11
SEC16YPL085W YNL146C-AQ3E7Z1 64 aa1.85□□□□□ -2.11
SEC16YPL085W RPL27AP0C2H6 136 aaKnown RBP1.85□□□□□ -2.11
SEC16YPL085W PCL1P24867 279 aa1.85□□□□□ -2.11
SEC16YPL085W ARO4P32449 370 aaKnown RBP1.85□□□□□ -2.11
SEC16YPL085W PEX2P32800 271 aa1.85□□□□□ -2.11
SEC16YPL085W ALG13P53178 202 aa1.85□□□□□ -2.11
SEC16YPL085W YDL218WQ07629 317 aa1.85□□□□□ -2.11
SEC16YPL085W HUT1Q12520 339 aa1.85□□□□□ -2.11
SEC16YPL085W COA2Q3E823 68 aa1.85□□□□□ -2.11
SEC16YPL085W ADE8P04161 214 aa1.85□□□□□ -2.11
SEC16YPL085W FYV5P25585 152 aa1.85□□□□□ -2.11
SEC16YPL085W YER121WP40076 114 aa1.85□□□□□ -2.11
SEC16YPL085W ATG27P46989 271 aa1.85□□□□□ -2.11
SEC16YPL085W YJR111CP47148 283 aaKnown RBP1.85□□□□□ -2.11
SEC16YPL085W KNH1P50112 268 aa1.85□□□□□ -2.11
SEC16YPL085W YDR102CQ03864 110 aa1.85□□□□□ -2.11
SEC16YPL085W YGL041C-BQ3E750 60 aa1.85□□□□□ -2.11
SEC16YPL085W MBF1O14467 151 aaKnown RBP1.85□□□□□ -2.11
SEC16YPL085W VEL1P53058 206 aa1.85□□□□□ -2.11
SEC16YPL085W CPD1P53314 239 aa1.85□□□□□ -2.11
SEC16YPL085W YIP3P53633 176 aa1.85□□□□□ -2.11
SEC16YPL085W MRPS8Q03799 155 aa1.85□□□□□ -2.11
SEC16YPL085W YDL242WQ07746 117 aa1.85□□□□□ -2.11
SEC16YPL085W GEP5Q12393 293 aa1.85□□□□□ -2.11
SEC16YPL085W PRP46Q12417 451 aaPredicted RBP1.85□□□□□ -2.11
SEC16YPL085W TRP1P00912 224 aa1.85□□□□□ -2.11
SEC16YPL085W SFT2P38166 215 aa1.85□□□□□ -2.11
SEC16YPL085W ATG8P38182 117 aaRIP-Chip data1.85□□□□□ -2.11not detected
SEC16YPL085W LYS20P48570 428 aaKnown RBP1.85□□□□□ -2.11
SEC16YPL085W SHH3Q04487 196 aa1.85□□□□□ -2.11
SEC16YPL085W AIR2Q12476 344 aaKnown RBP1.85□□□□□ -2.11
SEC16YPL085W YGL010WP25338 174 aa1.84□□□□□ -2.11
SEC16YPL085W MXR2P25566 168 aa1.84□□□□□ -2.11
SEC16YPL085W YKL097CP34245 136 aa1.84□□□□□ -2.11
SEC16YPL085W APS1P35181 156 aa1.84□□□□□ -2.11
SEC16YPL085W ARP3P47117 449 aaKnown RBP1.84□□□□□ -2.11
SEC16YPL085W SDS23P53172 527 aa1.84□□□□□ -2.11
SEC16YPL085W CTR3Q06686 241 aa1.84□□□□□ -2.11
SEC16YPL085W SVP26P38869 228 aa1.84□□□□□ -2.11
SEC16YPL085W CAT5P41735 233 aa1.84□□□□□ -2.11
SEC16YPL085W TPC1P53257 314 aa1.84□□□□□ -2.11
SEC16YPL085W GPI19Q04082 140 aa1.84□□□□□ -2.11
SEC16YPL085W STF1P01098 86 aa1.84□□□□□ -2.11
SEC16YPL085W SPC29P33419 253 aa1.84□□□□□ -2.11
SEC16YPL085W CSH1P38287 376 aa1.84□□□□□ -2.11
SEC16YPL085W FLO5P38894 1075 aa1.84□□□□□ -2.11
SEC16YPL085W YER084WP40057 128 aa1.84□□□□□ -2.11
SEC16YPL085W YOR304C-AO14468 76 aa1.84□□□□□ -2.12
SEC16YPL085W MSI1P13712 422 aa1.84□□□□□ -2.12
SEC16YPL085W UGX2P32772 223 aa1.84□□□□□ -2.12
SEC16YPL085W YFR045WP43617 309 aa1.84□□□□□ -2.12
SEC16YPL085W MIX17Q03667 156 aa1.84□□□□□ -2.12
SEC16YPL085W FRQ1Q06389 190 aa1.84□□□□□ -2.12
SEC16YPL085W YBL029C-AQ3E756 94 aa1.84□□□□□ -2.12
SEC16YPL085W UTH1P36135 365 aa1.84□□□□□ -2.12
SEC16YPL085W SPI1P40092 148 aa1.84□□□□□ -2.12
SEC16YPL085W SNN1P48232 102 aa1.84□□□□□ -2.12
SEC16YPL085W PMP3P87284 55 aa1.84□□□□□ -2.12
SEC16YPL085W IZH1Q03419 316 aa1.84□□□□□ -2.12
SEC16YPL085W AIM34Q03673 198 aa1.84□□□□□ -2.12
SEC16YPL085W YKR070WP36151 352 aaKnown RBP1.83□□□□□ -2.12
SEC16YPL085W MSL1P40567 111 aaPredicted RBP1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 135.1 ms