RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W SRP21P32342 167 aa1.68□□□□□ -2.14
SRL1YOR247W ACP1P32463 125 aa1.68□□□□□ -2.14
SRL1YOR247W SUI1P32911 108 aaKnown RBP1.68□□□□□ -2.14
SRL1YOR247W YEL008WP40001 126 aa1.68□□□□□ -2.14
SRL1YOR247W PHB1P40961 287 aa1.68□□□□□ -2.14
SRL1YOR247W RCF2P53721 224 aa1.68□□□□□ -2.14
SRL1YOR247W NMA1Q06178 401 aaKnown RBP1.68□□□□□ -2.14
SRL1YOR247W KEI1Q06346 221 aa1.68□□□□□ -2.14
SRL1YOR247W YDL241WQ07738 123 aa1.68□□□□□ -2.14
SRL1YOR247W SHB17P36136 271 aaKnown RBP1.67□□□□□ -2.14
SRL1YOR247W SCS22Q6Q595 175 aa1.67□□□□□ -2.14
SRL1YOR247W CYR1P08678 2026 aaKnown RBP1.67□□□□□ -2.14
SRL1YOR247W BEM2P39960 2167 aaKnown RBP1.66□□□□□ -2.14
SRL1YOR247W YCL042WP25572 119 aa1.66□□□□□ -2.14
SRL1YOR247W YBR242WP38331 238 aa1.66□□□□□ -2.14
SRL1YOR247W SPG1P50088 95 aa1.66□□□□□ -2.14
SRL1YOR247W COA3Q3E7B2 85 aa1.66□□□□□ -2.14
SRL1YOR247W TAR1Q8TGM6 124 aa1.66□□□□□ -2.14
SRL1YOR247W VMA10P48836 114 aaKnown RBP1.65□□□□□ -2.15
SRL1YOR247W IRC19Q07843 230 aa1.65□□□□□ -2.15
SRL1YOR247W SPC3Q12133 184 aa1.65□□□□□ -2.15
SRL1YOR247W ATP14Q12349 124 aa1.65□□□□□ -2.15
SRL1YOR247W RIB3Q99258 208 aa1.65□□□□□ -2.15
SRL1YOR247W SUA7P29055 345 aaPredicted RBP1.64□□□□□ -2.15
SRL1YOR247W ECM31P38122 312 aa1.64□□□□□ -2.15
SRL1YOR247W YEL014CP39999 101 aa1.64□□□□□ -2.15
SRL1YOR247W DUR1,2P32528 1835 aaKnown RBP1.63□□□□□ -2.15
SRL1YOR247W MRPL15P36523 253 aa1.63□□□□□ -2.15
SRL1YOR247W GLC8P41818 229 aa1.63□□□□□ -2.15
SRL1YOR247W APS3P47064 194 aa1.63□□□□□ -2.15
SRL1YOR247W LSM8P47093 109 aaKnown RBP1.63□□□□□ -2.15
SRL1YOR247W YGL230CP53074 147 aa1.63□□□□□ -2.15
SRL1YOR247W AVO2Q04749 426 aa1.63□□□□□ -2.15
SRL1YOR247W YDR278CQ05612 105 aa1.63□□□□□ -2.15
SRL1YOR247W FCY1Q12178 158 aa1.63□□□□□ -2.15
SRL1YOR247W UBR2Q07963 1872 aa1.63□□□□□ -2.15
SRL1YOR247W DIE2P50076 525 aa1.62□□□□□ -2.15
SRL1YOR247W YNL019CP53975 284 aa1.62□□□□□ -2.15
SRL1YOR247W YPR153WQ06537 140 aa1.62□□□□□ -2.15
SRL1YOR247W ACC1Q00955 2233 aaKnown RBP1.61□□□□□ -2.15
SRL1YOR247W EMC4P53073 190 aa1.61□□□□□ -2.15
SRL1YOR247W YGR017WP53210 297 aa1.61□□□□□ -2.15
SRL1YOR247W FIT1Q04433 528 aa1.61□□□□□ -2.15
SRL1YOR247W RAF1Q06891 181 aa1.61□□□□□ -2.15
SRL1YOR247W YLR361C-AQ3E795 98 aa1.61□□□□□ -2.15
SRL1YOR247W VAR1P02381 398 aa1.6□□□□□ -2.15
SRL1YOR247W KIN28P06242 306 aa1.6□□□□□ -2.15
SRL1YOR247W YHR212W-AP0CX91 67 aa1.6□□□□□ -2.15
SRL1YOR247W HSP150P32478 413 aa1.6□□□□□ -2.15
SRL1YOR247W YHR140WP38842 239 aa1.6□□□□□ -2.15
SRL1YOR247W VAM10Q08474 114 aa1.6□□□□□ -2.15
SRL1YOR247W YPR203WQ08994 102 aa1.6□□□□□ -2.15
SRL1YOR247W CMC4Q3E7A9 73 aa1.6□□□□□ -2.15
SRL1YOR247W YNL277W-AQ3E7Z0 62 aa1.6□□□□□ -2.15
SRL1YOR247W NHP6AP11632 93 aaKnown RBP1.59□□□□□ -2.15
SRL1YOR247W HYP2P23301 157 aaKnown RBP1.59□□□□□ -2.15
SRL1YOR247W YKR070WP36151 352 aaKnown RBP1.59□□□□□ -2.15
SRL1YOR247W PRS3P38689 320 aaKnown RBP1.59□□□□□ -2.15
SRL1YOR247W RPS20P38701 121 aaKnown RBP1.59□□□□□ -2.15
SRL1YOR247W DYN2Q02647 92 aa1.59□□□□□ -2.15
SRL1YOR247W CNL1Q06333 122 aa1.59□□□□□ -2.15
SRL1YOR247W HUT1Q12520 339 aa1.59□□□□□ -2.15
SRL1YOR247W DDP1Q99321 188 aaKnown RBP1.59□□□□□ -2.15
SRL1YOR247W AQY2P0CD90 149 aa1.58□□□□□ -2.16
SRL1YOR247W RPS1BP23248 255 aaKnown RBP1.58□□□□□ -2.16
SRL1YOR247W IPT1P38954 527 aa1.58□□□□□ -2.16
SRL1YOR247W YCL001W-AP87012 153 aa1.58□□□□□ -2.16
SRL1YOR247W YMR007WQ03675 126 aa1.58□□□□□ -2.16
SRL1YOR247W GPI11Q06636 219 aa1.58□□□□□ -2.16
SRL1YOR247W FMP49A0A023PZB3 126 aa1.57□□□□□ -2.16
SRL1YOR247W MRPL44P19956 98 aa1.57□□□□□ -2.16
SRL1YOR247W YHL037CP38733 133 aa1.57□□□□□ -2.16
SRL1YOR247W DCV1P43595 202 aa1.57□□□□□ -2.16
SRL1YOR247W ELC1Q03071 99 aa1.57□□□□□ -2.16
SRL1YOR247W SOM1Q05676 74 aa1.57□□□□□ -2.16
SRL1YOR247W NKP2Q06162 153 aa1.57□□□□□ -2.16
SRL1YOR247W COX5BP00425 151 aa1.56□□□□□ -2.16
SRL1YOR247W FYV5P25585 152 aa1.56□□□□□ -2.16
SRL1YOR247W RPL14AP36105 138 aaKnown RBP1.56□□□□□ -2.16
SRL1YOR247W YBR027CP38220 110 aa1.56□□□□□ -2.16
SRL1YOR247W RPL14BP38754 138 aaKnown RBP1.56□□□□□ -2.16
SRL1YOR247W HPM1P40481 377 aa1.56□□□□□ -2.16
SRL1YOR247W YFL051CP43552 160 aa1.56□□□□□ -2.16
SRL1YOR247W MPC1P53157 130 aaKnown RBP1.56□□□□□ -2.16
SRL1YOR247W NAT5Q08689 176 aa1.56□□□□□ -2.16
SRL1YOR247W YOR385WQ08909 290 aa1.56□□□□□ -2.16
SRL1YOR247W TIM8P57744 87 aa1.55□□□□□ -2.16
SRL1YOR247W Q0144Q9ZZW2 109 aa1.55□□□□□ -2.16
SRL1YOR247W UBR1P19812 1950 aa1.55□□□□□ -2.16
SRL1YOR247W RAD50P12753 1312 aa1.55□□□□□ -2.16
SRL1YOR247W YCR050CP25630 102 aa1.54□□□□□ -2.16
SRL1YOR247W RPS1AP33442 255 aaKnown RBP1.54□□□□□ -2.16
SRL1YOR247W SRL3P36167 246 aa1.54□□□□□ -2.16
SRL1YOR247W SLO1Q3E784 85 aa1.54□□□□□ -2.16
SRL1YOR247W MHF1Q3E835 90 aa1.54□□□□□ -2.16
SRL1YOR247W PHS1P40857 217 aa1.53□□□□□ -2.16
SRL1YOR247W TMA23Q03525 211 aa1.53□□□□□ -2.16
SRL1YOR247W HYM1P32464 399 aa1.52□□□□□ -2.17
SRL1YOR247W QCR10P37299 77 aa1.52□□□□□ -2.17
SRL1YOR247W SFT2P38166 215 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms