RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	ORM1	P53224	222 aa		4.16	□□□□□ -1.74
CSL4	YNL232W	FMP42	Q04991	504 aa		4.16	□□□□□ -1.74
CSL4	YNL232W	SNU23	Q12368	194 aa	Predicted RBP	4.16	□□□□□ -1.74
CSL4	YNL232W	HUG1	Q6Q5K6	68 aa		4.16	□□□□□ -1.74
CSL4	YNL232W	CUP2	P15315	225 aa		4.15	□□□□□ -1.75
CSL4	YNL232W	YCR043C	P25361	127 aa		4.15	□□□□□ -1.75
CSL4	YNL232W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
CSL4	YNL232W	SMB1	P40018	196 aa	Known RBP	4.15	□□□□□ -1.75
CSL4	YNL232W	YER076C	P40049	302 aa		4.15	□□□□□ -1.75
CSL4	YNL232W	PDS1	P40316	373 aa	Predicted RBP	4.15	□□□□□ -1.75
CSL4	YNL232W	YIA6	P40556	373 aa		4.15	□□□□□ -1.75
CSL4	YNL232W	MSO1	P53604	210 aa	Known RBP	4.15	□□□□□ -1.75
CSL4	YNL232W	YIF1	P53845	314 aa	Known RBP	4.15	□□□□□ -1.75
CSL4	YNL232W	CTR3	Q06686	241 aa		4.15	□□□□□ -1.75
CSL4	YNL232W	YDL242W	Q07746	117 aa		4.15	□□□□□ -1.75
CSL4	YNL232W	HRD1	Q08109	551 aa		4.15	□□□□□ -1.75
CSL4	YNL232W	SME1	Q12330	94 aa	Predicted RBP	4.15	□□□□□ -1.75
CSL4	YNL232W	YEL009C-A	A0A023PZF2	135 aa		4.14	□□□□□ -1.75
CSL4	YNL232W	ZRT1	P32804	376 aa		4.14	□□□□□ -1.75
CSL4	YNL232W	PGD1	P40356	397 aa		4.14	□□□□□ -1.75
CSL4	YNL232W	OST3	P48439	350 aa		4.14	□□□□□ -1.75
CSL4	YNL232W	CAF40	P53829	373 aa		4.14	□□□□□ -1.75
CSL4	YNL232W	YPR195C	Q06594	109 aa		4.14	□□□□□ -1.75
CSL4	YNL232W	ATX2	Q12067	313 aa		4.14	□□□□□ -1.75
CSL4	YNL232W	HTZ1	Q12692	134 aa	Known RBP	4.14	□□□□□ -1.75
CSL4	YNL232W	YIR021W-A	Q3E739	70 aa		4.14	□□□□□ -1.75
CSL4	YNL232W	POF1	P25576	258 aa		4.13	□□□□□ -1.75
CSL4	YNL232W	TOA2	P32774	122 aa		4.13	□□□□□ -1.75
CSL4	YNL232W	DOG2	P38773	246 aa		4.13	□□□□□ -1.75
CSL4	YNL232W	DOG1	P38774	246 aa		4.13	□□□□□ -1.75
CSL4	YNL232W	SER2	P42941	309 aa		4.13	□□□□□ -1.75
CSL4	YNL232W	APS2	Q00381	147 aa		4.13	□□□□□ -1.75
CSL4	YNL232W	RAV2	Q03956	351 aa		4.13	□□□□□ -1.75
CSL4	YNL232W	YPL257W	Q08974	193 aa		4.13	□□□□□ -1.75
CSL4	YNL232W	ERV2	Q12284	196 aa		4.13	□□□□□ -1.75
CSL4	YNL232W	TRM10	Q12400	293 aa		4.13	□□□□□ -1.75
CSL4	YNL232W	RPL31A	P0C2H8	113 aa	Known RBP	4.12	□□□□□ -1.75
CSL4	YNL232W	FCY2	P17064	533 aa		4.12	□□□□□ -1.75
CSL4	YNL232W	MIR1	P23641	311 aa	Known RBP	4.12	□□□□□ -1.75
CSL4	YNL232W	QRI5	P32344	111 aa		4.12	□□□□□ -1.75
CSL4	YNL232W	YKR041W	P36134	250 aa		4.12	□□□□□ -1.75
CSL4	YNL232W	MRPL24	P36525	258 aa	Predicted RBP	4.12	□□□□□ -1.75
CSL4	YNL232W	MRPL28	P36527	147 aa		4.12	□□□□□ -1.75
CSL4	YNL232W	COS8	P38723	381 aa		4.12	□□□□□ -1.75
CSL4	YNL232W	VMA7	P39111	118 aa		4.12	□□□□□ -1.75
CSL4	YNL232W	ARO8	P53090	500 aa	Known RBP	4.12	□□□□□ -1.75
CSL4	YNL232W	LST7	P53237	242 aa		4.12	□□□□□ -1.75
CSL4	YNL232W	PDR17	P53844	350 aa		4.12	□□□□□ -1.75
CSL4	YNL232W	GPI15	P53961	229 aa		4.12	□□□□□ -1.75
CSL4	YNL232W	RAD28	Q12021	506 aa		4.12	□□□□□ -1.75
CSL4	YNL232W	RPS18A	P0CX55	146 aa	Known RBP	4.11	□□□□□ -1.75
CSL4	YNL232W	RPS18B	P0CX56	146 aa	Predicted RBP	4.11	□□□□□ -1.75
CSL4	YNL232W	YCR023C	P25351	611 aa		4.11	□□□□□ -1.75
CSL4	YNL232W	RPS2	P25443	254 aa	Known RBP	4.11	□□□□□ -1.75
CSL4	YNL232W	UGX2	P32772	223 aa		4.11	□□□□□ -1.75
CSL4	YNL232W	SNU13	P39990	126 aa	Known RBP	4.11	□□□□□ -1.75
CSL4	YNL232W	POR2	P40478	281 aa		4.11	□□□□□ -1.75
CSL4	YNL232W	GVP36	P40531	326 aa	Known RBP	4.11	□□□□□ -1.75
CSL4	YNL232W	KEG1	P43614	200 aa		4.11	□□□□□ -1.75
CSL4	YNL232W	YAE1	P47118	141 aa	Predicted RBP	4.11	□□□□□ -1.75
CSL4	YNL232W	VHT1	P53241	593 aa		4.11	□□□□□ -1.75
CSL4	YNL232W	SGF11	Q03067	99 aa		4.11	□□□□□ -1.75
CSL4	YNL232W	TIM18	Q08749	192 aa		4.11	□□□□□ -1.75
CSL4	YNL232W	FEX1	Q08913	375 aa		4.11	□□□□□ -1.75
CSL4	YNL232W	FEX2	Q08991	375 aa		4.11	□□□□□ -1.75
CSL4	YNL232W	YOP1	Q12402	180 aa		4.11	□□□□□ -1.75
CSL4	YNL232W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.11	□□□□□ -1.75
CSL4	YNL232W	YOR011W-A	Q3E807	68 aa		4.11	□□□□□ -1.75
CSL4	YNL232W	MRP49	P32388	137 aa		4.1	□□□□□ -1.75
CSL4	YNL232W	SLM6	P38343	150 aa		4.1	□□□□□ -1.75
CSL4	YNL232W	GLE2	P40066	365 aa		4.1	□□□□□ -1.75
CSL4	YNL232W	GLC8	P41818	229 aa		4.1	□□□□□ -1.75
CSL4	YNL232W	MCM22	P47167	239 aa		4.1	□□□□□ -1.75
CSL4	YNL232W	YMR253C	Q04835	414 aa		4.1	□□□□□ -1.75
CSL4	YNL232W	VAM10	Q08474	114 aa		4.1	□□□□□ -1.75
CSL4	YNL232W	CDC7	P06243	507 aa		4.09	□□□□□ -1.75
CSL4	YNL232W	CAP2	P13517	287 aa		4.09	□□□□□ -1.75
CSL4	YNL232W	MRPL3	P36516	390 aa		4.09	□□□□□ -1.75
CSL4	YNL232W	DFG10	P40526	253 aa		4.09	□□□□□ -1.75
CSL4	YNL232W	ARP3	P47117	449 aa	Known RBP	4.09	□□□□□ -1.75
CSL4	YNL232W	HCH1	P53834	153 aa		4.09	□□□□□ -1.75
CSL4	YNL232W	BOR1	P53838	576 aa		4.09	□□□□□ -1.75
CSL4	YNL232W	CNL1	Q06333	122 aa		4.09	□□□□□ -1.75
CSL4	YNL232W	PBI2	P0CT04	75 aa	Known RBP	4.08	□□□□□ -1.76
CSL4	YNL232W	YCR001W	P25347	104 aa		4.08	□□□□□ -1.76
CSL4	YNL232W	RPL16B	P26785	198 aa	Known RBP	4.08	□□□□□ -1.76
CSL4	YNL232W	RRT1	P38192	103 aa		4.08	□□□□□ -1.76
CSL4	YNL232W	LSM12	P38828	187 aa	Known RBP	4.08	□□□□□ -1.76
CSL4	YNL232W	MRX11	Q03079	207 aa		4.08	□□□□□ -1.76
CSL4	YNL232W	LCL2	Q08045	131 aa		4.08	□□□□□ -1.76
CSL4	YNL232W	ATG41	Q12048	136 aa		4.08	□□□□□ -1.76
CSL4	YNL232W	SNF11	P38956	169 aa		4.07	□□□□□ -1.76
CSL4	YNL232W	YCH1	P42937	148 aa		4.07	□□□□□ -1.76
CSL4	YNL232W	YML018C	Q03730	393 aa		4.07	□□□□□ -1.76
CSL4	YNL232W	YMR244W	Q04018	355 aa		4.07	□□□□□ -1.76
CSL4	YNL232W	PRM7	Q12459	698 aa		4.07	□□□□□ -1.76
CSL4	YNL232W	YGL258W-A	Q3E740	77 aa		4.07	□□□□□ -1.76
CSL4	YNL232W	MED11	Q99278	115 aa		4.07	□□□□□ -1.76
CSL4	YNL232W	IGO2	Q9P305	131 aa		4.07	□□□□□ -1.76
CSL4	YNL232W	MRS1	P07266	363 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 63 ms