RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W YLR156WP0CE96 114 aa3.03□□□□□ -1.92
PUB1YNL016W YLR159WP0CE97 114 aa3.03□□□□□ -1.92
PUB1YNL016W YLR161WP0CE98 114 aa3.03□□□□□ -1.92
PUB1YNL016W URA5P13298 226 aaKnown RBP3.03□□□□□ -1.92
PUB1YNL016W PHO85P17157 305 aa3.03□□□□□ -1.92
PUB1YNL016W HYM1P32464 399 aa3.03□□□□□ -1.92
PUB1YNL016W TRS20P38334 175 aa3.03□□□□□ -1.92
PUB1YNL016W YAR068WP39564 161 aa3.03□□□□□ -1.92
PUB1YNL016W YER181CP40097 107 aa3.03□□□□□ -1.92
PUB1YNL016W YNL200CP40165 246 aaKnown RBP3.03□□□□□ -1.92
PUB1YNL016W YGR219WP53307 113 aa3.03□□□□□ -1.92
PUB1YNL016W VPS71Q03433 280 aa3.03□□□□□ -1.92
PUB1YNL016W YOR289WQ12012 251 aaPredicted RBP3.03□□□□□ -1.92
PUB1YNL016W YIR021W-AQ3E739 70 aa3.03□□□□□ -1.92
PUB1YNL016W YLR099W-AQ3E798 87 aa3.03□□□□□ -1.92
PUB1YNL016W YNL162W-AQ3E7A8 72 aa3.03□□□□□ -1.92
PUB1YNL016W ISD11Q6Q560 94 aa3.03□□□□□ -1.92
PUB1YNL016W CBP6P07253 162 aaPredicted RBP3.02□□□□□ -1.93
PUB1YNL016W CCA1P21269 546 aa3.02□□□□□ -1.93
PUB1YNL016W ATP15P21306 62 aa3.02□□□□□ -1.93
PUB1YNL016W RNP1P32385 249 aa3.02□□□□□ -1.93
PUB1YNL016W GSP1P32835 219 aaKnown RBP3.02□□□□□ -1.93
PUB1YNL016W GSP2P32836 220 aaKnown RBP3.02□□□□□ -1.93
PUB1YNL016W PTC1P35182 281 aa3.02□□□□□ -1.93
PUB1YNL016W SKG1P36169 355 aa3.02□□□□□ -1.93
PUB1YNL016W COS8P38723 381 aa3.02□□□□□ -1.93
PUB1YNL016W AIM2P39721 246 aa3.02□□□□□ -1.93
PUB1YNL016W ALG9P53868 555 aaKnown RBP3.02□□□□□ -1.93
PUB1YNL016W APJ1P53940 528 aa3.02□□□□□ -1.93
PUB1YNL016W NAT3Q06504 195 aa3.02□□□□□ -1.93
PUB1YNL016W TMC1Q08422 150 aaPredicted RBP3.02□□□□□ -1.93
PUB1YNL016W GEP5Q12393 293 aa3.02□□□□□ -1.93
PUB1YNL016W YBR298C-AQ8TGK4 73 aa3.02□□□□□ -1.93
PUB1YNL016W YAL067W-AQ8TGK6 75 aa3.02□□□□□ -1.93
PUB1YNL016W FMP49A0A023PZB3 126 aa3.01□□□□□ -1.93
PUB1YNL016W YEL009C-AA0A023PZF2 135 aa3.01□□□□□ -1.93
PUB1YNL016W ADK1P07170 222 aaKnown RBP3.01□□□□□ -1.93
PUB1YNL016W ADH3P07246 375 aaKnown RBP3.01□□□□□ -1.93
PUB1YNL016W ATP5P09457 212 aa3.01□□□□□ -1.93
PUB1YNL016W YHR214C-DP0CX93 97 aa3.01□□□□□ -1.93
PUB1YNL016W NMT1P14743 455 aa3.01□□□□□ -1.93
PUB1YNL016W TOM40P23644 387 aaKnown RBP3.01□□□□□ -1.93
PUB1YNL016W PRE7P23724 241 aaKnown RBP3.01□□□□□ -1.93
PUB1YNL016W HSP150P32478 413 aa3.01□□□□□ -1.93
PUB1YNL016W RCN1P36054 211 aa3.01□□□□□ -1.93
PUB1YNL016W ETR1P38071 380 aa3.01□□□□□ -1.93
PUB1YNL016W SWD3P38123 315 aa3.01□□□□□ -1.93
PUB1YNL016W RRT13P40042 185 aa3.01□□□□□ -1.93
PUB1YNL016W AYR1P40471 297 aa3.01□□□□□ -1.93
PUB1YNL016W YFL019CP43576 117 aa3.01□□□□□ -1.93
PUB1YNL016W YOL085CQ99345 113 aa3.01□□□□□ -1.93
PUB1YNL016W TIR1P10863 254 aa3□□□□□ -1.93
PUB1YNL016W GPI18P38211 433 aa3□□□□□ -1.93
PUB1YNL016W YHL037CP38733 133 aa3□□□□□ -1.93
PUB1YNL016W PRE5P40302 234 aaKnown RBP3□□□□□ -1.93
PUB1YNL016W GLR1P41921 483 aaKnown RBP3□□□□□ -1.93
PUB1YNL016W YFL051CP43552 160 aa3□□□□□ -1.93
PUB1YNL016W AIF1P52923 378 aa3□□□□□ -1.93
PUB1YNL016W CAX4P53223 239 aa3□□□□□ -1.93
PUB1YNL016W MET31Q03081 177 aa3□□□□□ -1.93
PUB1YNL016W SML1Q04964 104 aa3□□□□□ -1.93
PUB1YNL016W YOL014WQ08110 124 aa3□□□□□ -1.93
PUB1YNL016W RPL9AP05738 191 aaKnown RBP3□□□□□ -1.93
PUB1YNL016W COX10P21592 462 aa3□□□□□ -1.93
PUB1YNL016W VMA11P32842 164 aa3□□□□□ -1.93
PUB1YNL016W YRA2P36036 203 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
PUB1YNL016W FCY21P40039 528 aa3□□□□□ -1.93
PUB1YNL016W YER134CP40081 178 aa3□□□□□ -1.93
PUB1YNL016W RPL9BP51401 191 aaKnown RBP3□□□□□ -1.93
PUB1YNL016W YGR017WP53210 297 aa3□□□□□ -1.93
PUB1YNL016W ATG39Q06159 398 aa3□□□□□ -1.93
PUB1YNL016W YOR214CQ12282 236 aa3□□□□□ -1.93
PUB1YNL016W IES3Q12345 250 aa3□□□□□ -1.93
PUB1YNL016W YML100W-AQ8TGT0 57 aa3□□□□□ -1.93
PUB1YNL016W CCW14O13547 238 aa2.99□□□□□ -1.93
PUB1YNL016W SRP21P32342 167 aa2.99□□□□□ -1.93
PUB1YNL016W SPT14P32363 452 aa2.99□□□□□ -1.93
PUB1YNL016W SHB17P36136 271 aaKnown RBP2.99□□□□□ -1.93
PUB1YNL016W MRPL27P36526 146 aaPredicted RBP2.99□□□□□ -1.93
PUB1YNL016W FYV4P38783 130 aaPredicted RBP2.99□□□□□ -1.93
PUB1YNL016W VTC1P40046 129 aaRIP-Chip data2.99□□□□□ -1.93not detected
PUB1YNL016W PEP8P40335 379 aa2.99□□□□□ -1.93
PUB1YNL016W RSM27P53305 110 aa2.99□□□□□ -1.93
PUB1YNL016W CWC27Q02770 301 aa2.99□□□□□ -1.93
PUB1YNL016W YMR099CQ03161 297 aaKnown RBP2.99□□□□□ -1.93
PUB1YNL016W SPC3Q12133 184 aa2.99□□□□□ -1.93
PUB1YNL016W FCY1Q12178 158 aa2.99□□□□□ -1.93
PUB1YNL016W ARC15P40518 154 aaRIP-Chip data2.98□□□□□ -1.93not detected
PUB1YNL016W GPI2P46961 280 aa2.98□□□□□ -1.93
PUB1YNL016W YNL033WP53964 284 aa2.98□□□□□ -1.93
PUB1YNL016W YNL019CP53975 284 aa2.98□□□□□ -1.93
PUB1YNL016W FCF1Q05498 189 aaPredicted RBP2.98□□□□□ -1.93
PUB1YNL016W RAF1Q06891 181 aa2.98□□□□□ -1.93
PUB1YNL016W YLR118CQ12354 227 aa2.98□□□□□ -1.93
PUB1YNL016W ATO3Q12359 275 aa2.98□□□□□ -1.93
PUB1YNL016W ODC2Q99297 307 aa2.98□□□□□ -1.93
PUB1YNL016W YAR023CD6VPM8 179 aa2.97□□□□□ -1.93
PUB1YNL016W TIM9O74700 87 aa2.97□□□□□ -1.93
PUB1YNL016W PCL1P24867 279 aa2.97□□□□□ -1.93
PUB1YNL016W YBL010CP32788 280 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms