RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C GLC8P41818 229 aa2.68□□□□□ -1.98
VPS71YML041C VMA10P48836 114 aaKnown RBP2.68□□□□□ -1.98
VPS71YML041C EMC4P53073 190 aa2.68□□□□□ -1.98
VPS71YML041C MET31Q03081 177 aa2.68□□□□□ -1.98
VPS71YML041C RPS25BP0C0T4 108 aaKnown RBP2.67□□□□□ -1.98
VPS71YML041C SEN2P16658 377 aa2.67□□□□□ -1.98
VPS71YML041C RPB7P34087 171 aa2.67□□□□□ -1.98
VPS71YML041C YHR140WP38842 239 aa2.67□□□□□ -1.98
VPS71YML041C VMA7P39111 118 aa2.67□□□□□ -1.98
VPS71YML041C MPM1P40364 252 aa2.67□□□□□ -1.98
VPS71YML041C FRQ1Q06389 190 aa2.67□□□□□ -1.98
VPS71YML041C YHR086W-AQ3E746 53 aa2.67□□□□□ -1.98
VPS71YML041C RPS25AQ3E792 108 aaPredicted RBP2.67□□□□□ -1.98
VPS71YML041C ECM5Q03214 1411 aa2.67□□□□□ -1.98
VPS71YML041C MRP49P32388 137 aa2.66□□□□□ -1.98
VPS71YML041C YKR045CP36138 183 aa2.66□□□□□ -1.98
VPS71YML041C RCE1Q03530 315 aa2.66□□□□□ -1.98
VPS71YML041C WIP1Q2V2P8 89 aa2.66□□□□□ -1.98
VPS71YML041C YGL041W-AP0C5N3 154 aa2.65□□□□□ -1.99
VPS71YML041C YBR219CP38317 127 aa2.65□□□□□ -1.99
VPS71YML041C FLX1P40464 311 aa2.65□□□□□ -1.99
VPS71YML041C LSM8P47093 109 aaKnown RBP2.65□□□□□ -1.99
VPS71YML041C RCF2P53721 224 aa2.65□□□□□ -1.99
VPS71YML041C ELC1Q03071 99 aa2.65□□□□□ -1.99
VPS71YML041C SPC24Q04477 213 aa2.65□□□□□ -1.99
VPS71YML041C NMA1Q06178 401 aaKnown RBP2.65□□□□□ -1.99
VPS71YML041C KEI1Q06346 221 aa2.65□□□□□ -1.99
VPS71YML041C CSI2Q08054 341 aa2.65□□□□□ -1.99
VPS71YML041C CYR1P08678 2026 aaKnown RBP2.64□□□□□ -1.99
VPS71YML041C HYM1P32464 399 aa2.64□□□□□ -1.99
VPS71YML041C RPL14AP36105 138 aaKnown RBP2.64□□□□□ -1.99
VPS71YML041C RPL14BP38754 138 aaKnown RBP2.64□□□□□ -1.99
VPS71YML041C HYR1P40581 163 aaKnown RBP2.64□□□□□ -1.99
VPS71YML041C YLR162WQ06235 118 aa2.64□□□□□ -1.99
VPS71YML041C Q0144Q9ZZW2 109 aa2.64□□□□□ -1.99
VPS71YML041C RPL13BP40212 199 aaKnown RBP2.63□□□□□ -1.99
VPS71YML041C CWC27Q02770 301 aa2.63□□□□□ -1.99
VPS71YML041C YDL241WQ07738 123 aa2.63□□□□□ -1.99
VPS71YML041C RPL13AQ12690 199 aaPredicted RBP2.63□□□□□ -1.99
VPS71YML041C HPM1P40481 377 aa2.62□□□□□ -1.99
VPS71YML041C DIE2P50076 525 aa2.62□□□□□ -1.99
VPS71YML041C MPC1P53157 130 aaKnown RBP2.62□□□□□ -1.99
VPS71YML041C ELP6Q04868 273 aa2.62□□□□□ -1.99
VPS71YML041C IRC19Q07843 230 aa2.62□□□□□ -1.99
VPS71YML041C RPO41P13433 1351 aaKnown RBP2.61□□□□□ -1.99
VPS71YML041C YAE1P47118 141 aaPredicted RBP2.61□□□□□ -1.99
VPS71YML041C SFT1P43682 97 aa2.6□□□□□ -1.99
VPS71YML041C APS2Q00381 147 aa2.6□□□□□ -1.99
VPS71YML041C RAF1Q06891 181 aa2.6□□□□□ -1.99
VPS71YML041C QCR8P08525 94 aa2.59□□□□□ -1.99
VPS71YML041C YGL010WP25338 174 aa2.59□□□□□ -1.99
VPS71YML041C RPS1AP33442 255 aaKnown RBP2.59□□□□□ -1.99
VPS71YML041C ETR1P38071 380 aa2.59□□□□□ -1.99
VPS71YML041C YHL042WP38729 150 aa2.59□□□□□ -1.99
VPS71YML041C AIM11P87275 137 aa2.59□□□□□ -1.99
VPS71YML041C TVP18Q04767 167 aa2.59□□□□□ -1.99
VPS71YML041C YNL146C-AQ3E7Z1 64 aa2.59□□□□□ -1.99
VPS71YML041C PHS1P40857 217 aa2.58□□□□□ -2
VPS71YML041C MZM1Q03429 123 aaPredicted RBP2.58□□□□□ -2
VPS71YML041C HUT1Q12520 339 aa2.58□□□□□ -2
VPS71YML041C MRPL44P19956 98 aa2.57□□□□□ -2
VPS71YML041C YCR050CP25630 102 aa2.57□□□□□ -2
VPS71YML041C SAE3P89114 91 aa2.57□□□□□ -2
VPS71YML041C YLR118CQ12354 227 aa2.57□□□□□ -2
VPS71YML041C YLR099W-AQ3E798 87 aa2.57□□□□□ -2
VPS71YML041C RIF1P29539 1916 aa2.56□□□□□ -2
VPS71YML041C RPS1BP23248 255 aaKnown RBP2.56□□□□□ -2
VPS71YML041C ECM31P38122 312 aa2.56□□□□□ -2
VPS71YML041C YCL001W-AP87012 153 aa2.56□□□□□ -2
VPS71YML041C YMR252CQ04814 134 aa2.56□□□□□ -2
VPS71YML041C SOM1Q05676 74 aa2.56□□□□□ -2
VPS71YML041C DDP1Q99321 188 aaKnown RBP2.56□□□□□ -2
VPS71YML041C MYO2P19524 1574 aaKnown RBP2.56□□□□□ -2
VPS71YML041C PRE1P22141 198 aaKnown RBP2.55□□□□□ -2
VPS71YML041C SFT2P38166 215 aa2.55□□□□□ -2
VPS71YML041C TMA23Q03525 211 aa2.55□□□□□ -2
VPS71YML041C YPR153WQ06537 140 aa2.55□□□□□ -2
VPS71YML041C YIR021W-AQ3E739 70 aa2.55□□□□□ -2
VPS71YML041C FYV5P25585 152 aa2.54□□□□□ -2
VPS71YML041C TRS20P38334 175 aa2.54□□□□□ -2
VPS71YML041C YEL014CP39999 101 aa2.54□□□□□ -2
VPS71YML041C YOR385WQ08909 290 aa2.54□□□□□ -2
VPS71YML041C FCF2Q12035 217 aaPredicted RBP2.54□□□□□ -2
VPS71YML041C CDC39P25655 2108 aaKnown RBP2.53□□□□□ -2
VPS71YML041C YOR304C-AO14468 76 aa2.53□□□□□ -2
VPS71YML041C YAL064WP39711 94 aa2.53□□□□□ -2
VPS71YML041C YGL230CP53074 147 aa2.53□□□□□ -2
VPS71YML041C ARL3Q02804 198 aa2.53□□□□□ -2
VPS71YML041C TAR1Q8TGM6 124 aa2.53□□□□□ -2
VPS71YML041C COX5BP00425 151 aa2.52□□□□□ -2.01
VPS71YML041C YKR070WP36151 352 aaKnown RBP2.52□□□□□ -2.01
VPS71YML041C QCR10P37299 77 aa2.52□□□□□ -2.01
VPS71YML041C NAT5Q08689 176 aa2.52□□□□□ -2.01
VPS71YML041C ACC1Q00955 2233 aaKnown RBP2.52□□□□□ -2.01
VPS71YML041C FPR1P20081 114 aaKnown RBP2.51□□□□□ -2.01
VPS71YML041C UGX2P32772 223 aa2.51□□□□□ -2.01
VPS71YML041C GPI11Q06636 219 aa2.51□□□□□ -2.01
VPS71YML041C KTI11Q3E840 82 aa2.51□□□□□ -2.01
VPS71YML041C RPB11P38902 120 aa2.5□□□□□ -2.01
VPS71YML041C AVO2Q04749 426 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms