RNA–Protein interactions for RNA: YLR405W

DUS4, Transcript of Dihydrouridine synthase, yeast

Gene DUS4, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DUS4	YLR405W	UPS1	Q05776	175 aa		5.24	□□□□□ -1.57
DUS4	YLR405W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.24	□□□□□ -1.57	not detected
DUS4	YLR405W	YDL180W	Q12301	547 aa		5.24	□□□□□ -1.57
DUS4	YLR405W	POM34	Q12445	299 aa		5.24	□□□□□ -1.57
DUS4	YLR405W	SEC16	P48415	2195 aa	Known RBP	5.23	□□□□□ -1.57
DUS4	YLR405W	RPS2	P25443	254 aa	Known RBP	5.23	□□□□□ -1.57
DUS4	YLR405W	PCL2	P25693	308 aa		5.23	□□□□□ -1.57
DUS4	YLR405W	RAD23	P32628	398 aa	Known RBP	5.23	□□□□□ -1.57
DUS4	YLR405W	ZRT1	P32804	376 aa		5.23	□□□□□ -1.57
DUS4	YLR405W	SPC29	P33419	253 aa		5.23	□□□□□ -1.57
DUS4	YLR405W	YPT53	P36019	220 aa		5.23	□□□□□ -1.57
DUS4	YLR405W	YKR070W	P36151	352 aa	Known RBP	5.23	□□□□□ -1.57
DUS4	YLR405W	YBR090C	P38253	122 aa		5.23	□□□□□ -1.57
DUS4	YLR405W	BNA1	P47096	177 aa		5.23	□□□□□ -1.57
DUS4	YLR405W	HSK3	P69852	69 aa		5.23	□□□□□ -1.57
DUS4	YLR405W	FSF1	Q12029	327 aa	Known RBP	5.23	□□□□□ -1.57
DUS4	YLR405W	RKI1	Q12189	258 aa		5.23	□□□□□ -1.57
DUS4	YLR405W	YOR032W-A	Q8TGS1	66 aa		5.23	□□□□□ -1.57
DUS4	YLR405W	POL2	P21951	2222 aa	Known RBP	5.23	□□□□□ -1.57
DUS4	YLR405W	BEM2	P39960	2167 aa	Known RBP	5.22	□□□□□ -1.57
DUS4	YLR405W	RPL7A	P05737	244 aa	Known RBP	5.22	□□□□□ -1.57
DUS4	YLR405W	DAL82	P21705	255 aa		5.22	□□□□□ -1.57
DUS4	YLR405W	ROX3	P25046	220 aa		5.22	□□□□□ -1.57
DUS4	YLR405W	REC104	P33323	182 aa		5.22	□□□□□ -1.57
DUS4	YLR405W	UTH1	P36135	365 aa		5.22	□□□□□ -1.57
DUS4	YLR405W	YHR138C	P38841	114 aa	Predicted RBP	5.22	□□□□□ -1.57
DUS4	YLR405W	MIC27	P50945	234 aa		5.22	□□□□□ -1.57
DUS4	YLR405W	COX18	P53239	316 aa		5.22	□□□□□ -1.57
DUS4	YLR405W	YNR071C	P53757	342 aa		5.22	□□□□□ -1.57
DUS4	YLR405W	YML079W	Q03629	201 aa		5.22	□□□□□ -1.57
DUS4	YLR405W	RPL7B	Q12213	244 aa	Known RBP	5.22	□□□□□ -1.57
DUS4	YLR405W	YPS3	Q12303	508 aa		5.22	□□□□□ -1.57
DUS4	YLR405W	MRS3	P10566	314 aa		5.21	□□□□□ -1.58
DUS4	YLR405W	FEN2	P25621	512 aa	Known RBP	5.21	□□□□□ -1.58
DUS4	YLR405W	ECM33	P38248	429 aa	Known RBP	5.21	□□□□□ -1.58
DUS4	YLR405W	MTC6	P38849	526 aa		5.21	□□□□□ -1.58
DUS4	YLR405W	SEC72	P39742	193 aa	Known RBP	5.21	□□□□□ -1.58
DUS4	YLR405W	YNL198C	P40166	100 aa		5.21	□□□□□ -1.58
DUS4	YLR405W	EGT2	P42835	1041 aa		5.21	□□□□□ -1.58
DUS4	YLR405W	CAB4	P53332	305 aa		5.21	□□□□□ -1.58
DUS4	YLR405W	NRM1	P53718	249 aa		5.21	□□□□□ -1.58
DUS4	YLR405W	YDR114C	Q04597	100 aa		5.21	□□□□□ -1.58
DUS4	YLR405W	SNA4	Q07549	140 aa		5.21	□□□□□ -1.58
DUS4	YLR405W	RRS1	Q08746	203 aa	Known RBP	5.21	□□□□□ -1.58
DUS4	YLR405W	BOL1	Q3E793	110 aa		5.21	□□□□□ -1.58
DUS4	YLR405W	Q0144	Q9ZZW2	109 aa		5.21	□□□□□ -1.58
DUS4	YLR405W	ACC1	Q00955	2233 aa	Known RBP	5.21	□□□□□ -1.58
DUS4	YLR405W	IRA2	P19158	3079 aa		5.21	□□□□□ -1.58
DUS4	YLR405W	YMR316C-A	I2HB70	103 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	YLR302C	O13544	120 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	RPP2A	P05319	106 aa	Known RBP	5.2	□□□□□ -1.58
DUS4	YLR405W	RPL12A	P0CX53	165 aa	Known RBP	5.2	□□□□□ -1.58
DUS4	YLR405W	RPL12B	P0CX54	165 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	YFL068W	P0CX99	160 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	YLL066W-A	P0CY00	160 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	YLL067W-A	P0CY01	160 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	MRPL39	P36533	70 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	YBR220C	P38318	560 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	BRP1	P53194	125 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	SWT21	P53873	357 aa	Predicted RBP	5.2	□□□□□ -1.58
DUS4	YLR405W	MRPL19	P53875	158 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	VPS71	Q03433	280 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	BET5	Q03630	159 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	YHP1	Q04116	353 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	YDR391C	Q04170	232 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	DPP1	Q05521	289 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	ARC18	Q05933	178 aa	Known RBP	5.2	□□□□□ -1.58
DUS4	YLR405W	RFM1	Q12192	310 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	RNH203	Q12338	110 aa		5.2	□□□□□ -1.58
DUS4	YLR405W	MRS1	P07266	363 aa		5.19	□□□□□ -1.58
DUS4	YLR405W	RPL35A	P0CX84	120 aa	Known RBP	5.19	□□□□□ -1.58
DUS4	YLR405W	RPL35B	P0CX85	120 aa	Known RBP	5.19	□□□□□ -1.58
DUS4	YLR405W	TIR1	P10863	254 aa		5.19	□□□□□ -1.58
DUS4	YLR405W	YHR173C	P38864	112 aa		5.19	□□□□□ -1.58
DUS4	YLR405W	YER084W	P40057	128 aa		5.19	□□□□□ -1.58
DUS4	YLR405W	YNL200C	P40165	246 aa	Known RBP	5.19	□□□□□ -1.58
DUS4	YLR405W	YIL012W	P40551	113 aa		5.19	□□□□□ -1.58
DUS4	YLR405W	SAS2	P40963	338 aa		5.19	□□□□□ -1.58
DUS4	YLR405W	GZF3	P42944	551 aa	Known RBP	5.19	□□□□□ -1.58
DUS4	YLR405W	SDS23	P53172	527 aa		5.19	□□□□□ -1.58
DUS4	YLR405W	POP3	P53833	195 aa	Predicted RBP	5.19	□□□□□ -1.58
DUS4	YLR405W	ATP19	P81451	68 aa		5.19	□□□□□ -1.58
DUS4	YLR405W	RXT3	Q07458	294 aa		5.19	□□□□□ -1.58
DUS4	YLR405W	YIL102C-A	Q2V2P5	75 aa		5.19	□□□□□ -1.58
DUS4	YLR405W	WIP1	Q2V2P8	89 aa		5.19	□□□□□ -1.58
DUS4	YLR405W	YGL258W-A	Q3E740	77 aa		5.19	□□□□□ -1.58
DUS4	YLR405W	YOS1	Q3E834	85 aa		5.19	□□□□□ -1.58
DUS4	YLR405W	VPS63	O13549	108 aa		5.18	□□□□□ -1.58
DUS4	YLR405W	YMR31	P19955	123 aa		5.18	□□□□□ -1.58
DUS4	YLR405W	HYP2	P23301	157 aa	Known RBP	5.18	□□□□□ -1.58
DUS4	YLR405W	PRS4	P38063	326 aa	Predicted RBP	5.18	□□□□□ -1.58
DUS4	YLR405W	ICS2	P38284	255 aa		5.18	□□□□□ -1.58
DUS4	YLR405W	YAR068W	P39564	161 aa		5.18	□□□□□ -1.58
DUS4	YLR405W	ATG4	P53867	494 aa		5.18	□□□□□ -1.58
DUS4	YLR405W	YDR209C	Q03480	137 aa		5.18	□□□□□ -1.58
DUS4	YLR405W	SCW10	Q04951	389 aa		5.18	□□□□□ -1.58
DUS4	YLR405W	LIP2	Q06005	328 aa		5.18	□□□□□ -1.58
DUS4	YLR405W	POS5	Q06892	414 aa		5.18	□□□□□ -1.58
DUS4	YLR405W	ADH1	P00330	348 aa	Known RBP	5.17	□□□□□ -1.58
DUS4	YLR405W	RPL23A	P0CX41	137 aa	Known RBP	5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms