RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W YNL277W-AQ3E7Z0 62 aa7.66□□□□□ -1.18
SFP1YLR403W RPL2AP0CX45 254 aaKnown RBP7.66□□□□□ -1.18
SFP1YLR403W RPL2BP0CX46 254 aaKnown RBP7.66□□□□□ -1.18
SFP1YLR403W YCR050CP25630 102 aa7.66□□□□□ -1.18
SFP1YLR403W IES6P32617 166 aa7.66□□□□□ -1.18
SFP1YLR403W GPI19Q04082 140 aa7.66□□□□□ -1.18
SFP1YLR403W YLL053CP0CD98 152 aa7.65□□□□□ -1.18
SFP1YLR403W RPS2P25443 254 aaKnown RBP7.65□□□□□ -1.18
SFP1YLR403W AGA2P32781 87 aa7.65□□□□□ -1.18
SFP1YLR403W TIS11P47977 285 aa7.65□□□□□ -1.18
SFP1YLR403W RAF1Q06891 181 aa7.65□□□□□ -1.18
SFP1YLR403W SLM3Q12093 417 aa7.65□□□□□ -1.18
SFP1YLR403W MRH1Q12117 320 aaPredicted RBP7.65□□□□□ -1.18
SFP1YLR403W YFL041W-AQ3E817 63 aa7.65□□□□□ -1.18
SFP1YLR403W PEX22P39718 180 aa7.64□□□□□ -1.19
SFP1YLR403W VPS71Q03433 280 aa7.64□□□□□ -1.19
SFP1YLR403W SYM1Q06563 197 aa7.64□□□□□ -1.19
SFP1YLR403W YAR068WP39564 161 aa7.64□□□□□ -1.19
SFP1YLR403W YCL021W-AQ96VH3 125 aa7.64□□□□□ -1.19
SFP1YLR403W COX5AP00424 153 aa7.63□□□□□ -1.19
SFP1YLR403W GAL2P13181 574 aa7.63□□□□□ -1.19
SFP1YLR403W YNR071CP53757 342 aa7.63□□□□□ -1.19
SFP1YLR403W DAD1Q12248 94 aa7.63□□□□□ -1.19
SFP1YLR403W KSH1Q8TGJ3 72 aa7.63□□□□□ -1.19
SFP1YLR403W ODC2Q99297 307 aa7.63□□□□□ -1.19
SFP1YLR403W RPL28P02406 149 aaKnown RBP7.63□□□□□ -1.19
SFP1YLR403W PBI2P0CT04 75 aaKnown RBP7.63□□□□□ -1.19
SFP1YLR403W VPS25P47142 202 aa7.63□□□□□ -1.19
SFP1YLR403W YDL242WQ07746 117 aa7.63□□□□□ -1.19
SFP1YLR403W MSA1Q08471 629 aa7.63□□□□□ -1.19
SFP1YLR403W NDD1Q08887 554 aa7.63□□□□□ -1.19
SFP1YLR403W TRP1P00912 224 aa7.62□□□□□ -1.19
SFP1YLR403W YEL028WP39989 153 aa7.62□□□□□ -1.19
SFP1YLR403W PRY3P47033 881 aa7.62□□□□□ -1.19
SFP1YLR403W HPA2Q06592 156 aa7.62□□□□□ -1.19
SFP1YLR403W YPS3Q12303 508 aa7.62□□□□□ -1.19
SFP1YLR403W SIS1P25294 352 aaKnown RBP7.61□□□□□ -1.19
SFP1YLR403W YAR029WP39549 74 aa7.61□□□□□ -1.19
SFP1YLR403W DSK2P48510 373 aa7.61□□□□□ -1.19
SFP1YLR403W YKL023C-AQ2V2P3 75 aa7.61□□□□□ -1.19
SFP1YLR403W SWT21P53873 357 aaPredicted RBP7.61□□□□□ -1.19
SFP1YLR403W LPP1Q04396 274 aa7.61□□□□□ -1.19
SFP1YLR403W CRD1Q07560 283 aa7.61□□□□□ -1.19
SFP1YLR403W VEL1P53058 206 aa7.6□□□□□ -1.19
SFP1YLR403W RPS21AP0C0V8 87 aaKnown RBP7.59□□□□□ -1.19
SFP1YLR403W MRP21P38175 177 aa7.59□□□□□ -1.19
SFP1YLR403W ANS1P38832 159 aa7.59□□□□□ -1.19
SFP1YLR403W MET31Q03081 177 aa7.59□□□□□ -1.19
SFP1YLR403W YDR042CQ03205 200 aa7.59□□□□□ -1.19
SFP1YLR403W ROT1Q03691 256 aa7.59□□□□□ -1.19
SFP1YLR403W YOR105WQ08504 108 aa7.59□□□□□ -1.19
SFP1YLR403W DAT1P13483 248 aaKnown RBP7.59□□□□□ -1.19
SFP1YLR403W DFM1Q12743 341 aaKnown RBP7.59□□□□□ -1.19
SFP1YLR403W COX9P07255 59 aa7.58□□□□□ -1.2
SFP1YLR403W MRS3P10566 314 aa7.58□□□□□ -1.2
SFP1YLR403W MDH2P22133 377 aa7.58□□□□□ -1.2
SFP1YLR403W SPO13P23624 291 aa7.58□□□□□ -1.2
SFP1YLR403W YNL195CP40168 261 aa7.58□□□□□ -1.2
SFP1YLR403W YGR164WP53291 111 aa7.58□□□□□ -1.2
SFP1YLR403W AYT1Q12226 474 aa7.58□□□□□ -1.2
SFP1YLR403W YLR149CQ99296 730 aa7.58□□□□□ -1.2
SFP1YLR403W RPL18AP0CX49 186 aaKnown RBP7.58□□□□□ -1.2
SFP1YLR403W RPL18BP0CX50 186 aaKnown RBP7.58□□□□□ -1.2
SFP1YLR403W YCR025CP25352 136 aa7.58□□□□□ -1.2
SFP1YLR403W PIR3Q03180 325 aa7.58□□□□□ -1.2
SFP1YLR403W YOR292CQ08743 309 aa7.58□□□□□ -1.2
SFP1YLR403W SPO24Q3E752 67 aa7.58□□□□□ -1.2
SFP1YLR403W TDA7P53882 636 aaPredicted RBP7.57□□□□□ -1.2
SFP1YLR403W RFM1Q12192 310 aa7.57□□□□□ -1.2
SFP1YLR403W RPS22BQ3E7Y3 130 aaKnown RBP7.57□□□□□ -1.2
SFP1YLR403W FLO1P32768 1537 aa7.57□□□□□ -1.2
SFP1YLR403W GPI18P38211 433 aa7.56□□□□□ -1.2
SFP1YLR403W ECM34P38728 170 aa7.56□□□□□ -1.2
SFP1YLR403W YHL018WP38744 120 aaPredicted RBP7.56□□□□□ -1.2
SFP1YLR403W SVP26P38869 228 aa7.56□□□□□ -1.2
SFP1YLR403W GLO1P50107 326 aa7.56□□□□□ -1.2
SFP1YLR403W YLR281CQ05863 155 aa7.56□□□□□ -1.2
SFP1YLR403W SMP1P38128 452 aa7.56□□□□□ -1.2
SFP1YLR403W MBB1P39534 108 aa7.56□□□□□ -1.2
SFP1YLR403W YPL073CP40323 161 aa7.56□□□□□ -1.2
SFP1YLR403W HST4P53688 370 aa7.56□□□□□ -1.2
SFP1YLR403W GAT3Q07928 141 aa7.56□□□□□ -1.2
SFP1YLR403W YDL007C-AQ2V2Q0 85 aa7.56□□□□□ -1.2
SFP1YLR403W YOL162WP0CF19 215 aa7.55□□□□□ -1.2
SFP1YLR403W AHT1P29589 182 aa7.55□□□□□ -1.2
SFP1YLR403W MTC7P32633 139 aa7.55□□□□□ -1.2
SFP1YLR403W TOM6P33448 61 aa7.55□□□□□ -1.2
SFP1YLR403W YNR064CP53750 290 aa7.55□□□□□ -1.2
SFP1YLR403W SOD1P00445 154 aaKnown RBP7.55□□□□□ -1.2
SFP1YLR403W YBL059WP34224 193 aa7.55□□□□□ -1.2
SFP1YLR403W NRG2P38082 220 aa7.55□□□□□ -1.2
SFP1YLR403W YPT10P38146 199 aa7.55□□□□□ -1.2
SFP1YLR403W YNL200CP40165 246 aaKnown RBP7.55□□□□□ -1.2
SFP1YLR403W DFG10P40526 253 aa7.55□□□□□ -1.2
SFP1YLR403W SGN1P40561 250 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
SFP1YLR403W MIX17Q03667 156 aa7.55□□□□□ -1.2
SFP1YLR403W COA2Q3E823 68 aa7.55□□□□□ -1.2
SFP1YLR403W CCH1P50077 2039 aa7.54□□□□□ -1.2
SFP1YLR403W YHR140WP38842 239 aa7.54□□□□□ -1.2
SFP1YLR403W POP3P53833 195 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms