RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeastyeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD8YLR353W YER188WP40103 239 aa3.6□□□□□ -1.83
BUD8YLR353W SDS23P53172 527 aa3.6□□□□□ -1.83
BUD8YLR353W SDC1Q03323 175 aa3.6□□□□□ -1.83
BUD8YLR353W YDR115WQ04598 105 aa3.6□□□□□ -1.83
BUD8YLR353W YLR179CQ06252 201 aaKnown RBP3.6□□□□□ -1.83
BUD8YLR353W CTR3Q06686 241 aa3.6□□□□□ -1.83
BUD8YLR353W PAM18Q07914 168 aa3.6□□□□□ -1.83
BUD8YLR353W RAD28Q12021 506 aa3.6□□□□□ -1.83
BUD8YLR353W COA2Q3E823 68 aa3.6□□□□□ -1.83
BUD8YLR353W BGL2P15703 313 aaKnown RBP3.59□□□□□ -1.83
BUD8YLR353W YKL187CP34231 750 aa3.59□□□□□ -1.83
BUD8YLR353W SSS1P35179 80 aa3.59□□□□□ -1.83
BUD8YLR353W YGP1P38616 354 aaKnown RBP3.59□□□□□ -1.83
BUD8YLR353W PRS2P38620 318 aaKnown RBP3.59□□□□□ -1.83
BUD8YLR353W PAU4P53427 120 aa3.59□□□□□ -1.83
BUD8YLR353W RPL25P04456 142 aaKnown RBP3.58□□□□□ -1.84
BUD8YLR353W PAU1P0CE88 120 aa3.58□□□□□ -1.84
BUD8YLR353W PAU14P0CE89 120 aa3.58□□□□□ -1.84
BUD8YLR353W PAU6P0CE90 120 aa3.58□□□□□ -1.84
BUD8YLR353W PAU18P0CE91 120 aa3.58□□□□□ -1.84
BUD8YLR353W PAU8P0CE92 120 aa3.58□□□□□ -1.84
BUD8YLR353W PAU11P0CE93 120 aa3.58□□□□□ -1.84
BUD8YLR353W MRS4P23500 304 aa3.58□□□□□ -1.84
BUD8YLR353W SPT4P32914 102 aaPredicted RBP3.58□□□□□ -1.84
BUD8YLR353W UPS2P35200 230 aa3.58□□□□□ -1.84
BUD8YLR353W YBR013CP38215 129 aa3.58□□□□□ -1.84
BUD8YLR353W PAU13P38725 120 aa3.58□□□□□ -1.84
BUD8YLR353W FLX1P40464 311 aa3.58□□□□□ -1.84
BUD8YLR353W PAU10Q03050 120 aa3.58□□□□□ -1.84
BUD8YLR353W MRX11Q03079 207 aa3.58□□□□□ -1.84
BUD8YLR353W MIX14Q04341 121 aa3.58□□□□□ -1.84
BUD8YLR353W AVO2Q04749 426 aa3.58□□□□□ -1.84
BUD8YLR353W PRP11Q07350 266 aaPredicted RBP3.58□□□□□ -1.84
BUD8YLR353W PAU20Q08322 120 aa3.58□□□□□ -1.84
BUD8YLR353W TMC1Q08422 150 aaPredicted RBP3.58□□□□□ -1.84
BUD8YLR353W YPL264CQ08980 353 aa3.58□□□□□ -1.84
BUD8YLR353W PRR2Q12310 699 aa3.58□□□□□ -1.84
BUD8YLR353W PAU9Q3E770 120 aa3.58□□□□□ -1.84
BUD8YLR353W HUG1Q6Q5K6 68 aa3.58□□□□□ -1.84
BUD8YLR353W YEL045CP32616 141 aa3.58□□□□□ -1.84
BUD8YLR353W PRS4P38063 326 aaPredicted RBP3.58□□□□□ -1.84
BUD8YLR353W HSP10P38910 106 aa3.58□□□□□ -1.84
BUD8YLR353W YIP3P53633 176 aa3.58□□□□□ -1.84
BUD8YLR353W PDR17P53844 350 aa3.58□□□□□ -1.84
BUD8YLR353W ARL3Q02804 198 aa3.58□□□□□ -1.84
BUD8YLR353W TSA2Q04120 196 aa3.58□□□□□ -1.84
BUD8YLR353W SME1Q12330 94 aaPredicted RBP3.58□□□□□ -1.84
BUD8YLR353W PAU19P0CE85 124 aa3.57□□□□□ -1.84
BUD8YLR353W PAU21P0CE86 164 aa3.57□□□□□ -1.84
BUD8YLR353W PAU22P0CE87 164 aa3.57□□□□□ -1.84
BUD8YLR353W NHP6AP11632 93 aaKnown RBP3.57□□□□□ -1.84
BUD8YLR353W YCR025CP25352 136 aa3.57□□□□□ -1.84
BUD8YLR353W PAU3P25610 124 aa3.57□□□□□ -1.84
BUD8YLR353W AHT1P29589 182 aa3.57□□□□□ -1.84
BUD8YLR353W RPL14AP36105 138 aaKnown RBP3.57□□□□□ -1.84
BUD8YLR353W GPI18P38211 433 aa3.57□□□□□ -1.84
BUD8YLR353W RPL14BP38754 138 aaKnown RBP3.57□□□□□ -1.84
BUD8YLR353W ERV14P53173 138 aa3.57□□□□□ -1.84
BUD8YLR353W YDR391CQ04170 232 aa3.57□□□□□ -1.84
BUD8YLR353W YOR292CQ08743 309 aa3.57□□□□□ -1.84
BUD8YLR353W COA6Q3E846 104 aa3.57□□□□□ -1.84
BUD8YLR353W ATG40Q99325 256 aa3.57□□□□□ -1.84
BUD8YLR353W QCR9P22289 66 aa3.56□□□□□ -1.84
BUD8YLR353W SPO13P23624 291 aa3.56□□□□□ -1.84
BUD8YLR353W ALK2P32789 676 aaPredicted RBP3.56□□□□□ -1.84
BUD8YLR353W YOX1P34161 385 aa3.56□□□□□ -1.84
BUD8YLR353W SHB17P36136 271 aaKnown RBP3.56□□□□□ -1.84
BUD8YLR353W MRPL28P36527 147 aa3.56□□□□□ -1.84
BUD8YLR353W PAU5P43575 122 aa3.56□□□□□ -1.84
BUD8YLR353W TTI2P47168 421 aa3.56□□□□□ -1.84
BUD8YLR353W CUE4Q04201 117 aaPredicted RBP3.56□□□□□ -1.84
BUD8YLR353W DPP1Q05521 289 aa3.56□□□□□ -1.84
BUD8YLR353W UPS1Q05776 175 aa3.56□□□□□ -1.84
BUD8YLR353W HRD1Q08109 551 aa3.56□□□□□ -1.84
BUD8YLR353W FLO9P39712 1322 aa3.56□□□□□ -1.84
BUD8YLR353W CBP6P07253 162 aaPredicted RBP3.56□□□□□ -1.84
BUD8YLR353W IES6P32617 166 aa3.56□□□□□ -1.84
BUD8YLR353W IRC22P40006 225 aa3.56□□□□□ -1.84
BUD8YLR353W ECO1P43605 281 aa3.56□□□□□ -1.84
BUD8YLR353W YPR098CQ06089 161 aa3.56□□□□□ -1.84
BUD8YLR353W RAX2Q12465 1220 aa3.56□□□□□ -1.84
BUD8YLR353W MRPL39P36533 70 aa3.55□□□□□ -1.84
BUD8YLR353W COX15P40086 486 aa3.55□□□□□ -1.84
BUD8YLR353W YIL012WP40551 113 aa3.55□□□□□ -1.84
BUD8YLR353W GEP7P53171 287 aa3.55□□□□□ -1.84
BUD8YLR353W APS2Q00381 147 aa3.55□□□□□ -1.84
BUD8YLR353W CYT2Q00873 224 aa3.55□□□□□ -1.84
BUD8YLR353W RPL21AQ02753 160 aaKnown RBP3.55□□□□□ -1.84
BUD8YLR353W RIM9Q04734 239 aa3.55□□□□□ -1.84
BUD8YLR353W MHR1Q06630 226 aa3.55□□□□□ -1.84
BUD8YLR353W YDL180WQ12301 547 aa3.55□□□□□ -1.84
BUD8YLR353W ATG5Q12380 294 aa3.55□□□□□ -1.84
BUD8YLR353W DCN1Q12395 269 aa3.55□□□□□ -1.84
BUD8YLR353W MPD1Q12404 318 aaKnown RBP3.55□□□□□ -1.84
BUD8YLR353W FOL3Q12676 427 aaPredicted RBP3.55□□□□□ -1.84
BUD8YLR353W IMP1P28627 190 aa3.54□□□□□ -1.84
BUD8YLR353W ERG28P40030 148 aa3.54□□□□□ -1.84
BUD8YLR353W CIN5P40917 295 aa3.54□□□□□ -1.84
BUD8YLR353W YPS5P53057 165 aa3.54□□□□□ -1.84
BUD8YLR353W YGR050CP53231 118 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms