RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C ALB1P47019 175 aaPredicted RBP0.89□□□□□ -2.27
VPS55YJR044C TIM8P57744 87 aa0.89□□□□□ -2.27
VPS55YJR044C APS2Q00381 147 aa0.89□□□□□ -2.27
VPS55YJR044C UPS1Q05776 175 aa0.89□□□□□ -2.27
VPS55YJR044C YHR086W-AQ3E746 53 aa0.89□□□□□ -2.27
VPS55YJR044C YMR030W-AQ3E760 96 aa0.89□□□□□ -2.27
VPS55YJR044C DDP1Q99321 188 aaKnown RBP0.89□□□□□ -2.27
VPS55YJR044C RIF1P29539 1916 aa0.89□□□□□ -2.27
VPS55YJR044C ACC1Q00955 2233 aaKnown RBP0.88□□□□□ -2.27
VPS55YJR044C SPS2P08459 502 aa0.88□□□□□ -2.27
VPS55YJR044C QCR8P08525 94 aa0.88□□□□□ -2.27
VPS55YJR044C RPS1BP23248 255 aaKnown RBP0.88□□□□□ -2.27
VPS55YJR044C ETR1P38071 380 aa0.88□□□□□ -2.27
VPS55YJR044C YHL018WP38744 120 aaPredicted RBP0.88□□□□□ -2.27
VPS55YJR044C GLC8P41818 229 aa0.88□□□□□ -2.27
VPS55YJR044C SFT1P43682 97 aa0.88□□□□□ -2.27
VPS55YJR044C LSM8P47093 109 aaKnown RBP0.88□□□□□ -2.27
VPS55YJR044C DAN1P47178 298 aa0.88□□□□□ -2.27
VPS55YJR044C PAC10P48363 199 aa0.88□□□□□ -2.27
VPS55YJR044C RCF2P53721 224 aa0.88□□□□□ -2.27
VPS55YJR044C DAD4P69851 72 aa0.88□□□□□ -2.27
VPS55YJR044C RCE1Q03530 315 aa0.88□□□□□ -2.27
VPS55YJR044C YDR102CQ03864 110 aa0.88□□□□□ -2.27
VPS55YJR044C RNH202Q05635 350 aa0.88□□□□□ -2.27
VPS55YJR044C NMA1Q06178 401 aaKnown RBP0.88□□□□□ -2.27
VPS55YJR044C FIT2Q08906 153 aa0.88□□□□□ -2.27
VPS55YJR044C HUT1Q12520 339 aa0.88□□□□□ -2.27
VPS55YJR044C YOR381W-AQ3E804 55 aa0.88□□□□□ -2.27
VPS55YJR044C KTI11Q3E840 82 aa0.88□□□□□ -2.27
VPS55YJR044C CYR1P08678 2026 aaKnown RBP0.88□□□□□ -2.27
VPS55YJR044C RPS25BP0C0T4 108 aaKnown RBP0.87□□□□□ -2.27
VPS55YJR044C YOL162WP0CF19 215 aa0.87□□□□□ -2.27
VPS55YJR044C DDR48P18899 430 aaKnown RBP0.87□□□□□ -2.27
VPS55YJR044C MRPL44P19956 98 aa0.87□□□□□ -2.27
VPS55YJR044C PRE1P22141 198 aaKnown RBP0.87□□□□□ -2.27
VPS55YJR044C MRP49P32388 137 aa0.87□□□□□ -2.27
VPS55YJR044C NRG2P38082 220 aa0.87□□□□□ -2.27
VPS55YJR044C ECM31P38122 312 aa0.87□□□□□ -2.27
VPS55YJR044C YBR219CP38317 127 aa0.87□□□□□ -2.27
VPS55YJR044C CCS1P40202 249 aaKnown RBP0.87□□□□□ -2.27
VPS55YJR044C FLX1P40464 311 aa0.87□□□□□ -2.27
VPS55YJR044C HPM1P40481 377 aa0.87□□□□□ -2.27
VPS55YJR044C PHS1P40857 217 aa0.87□□□□□ -2.27
VPS55YJR044C DIE2P50076 525 aa0.87□□□□□ -2.27
VPS55YJR044C ARL3Q02804 198 aa0.87□□□□□ -2.27
VPS55YJR044C ELC1Q03071 99 aa0.87□□□□□ -2.27
VPS55YJR044C MZM1Q03429 123 aaPredicted RBP0.87□□□□□ -2.27
VPS55YJR044C TMA23Q03525 211 aa0.87□□□□□ -2.27
VPS55YJR044C AIM36Q03798 255 aa0.87□□□□□ -2.27
VPS55YJR044C YPR153WQ06537 140 aa0.87□□□□□ -2.27
VPS55YJR044C YLR118CQ12354 227 aa0.87□□□□□ -2.27
VPS55YJR044C RPS25AQ3E792 108 aaPredicted RBP0.87□□□□□ -2.27
VPS55YJR044C SPP41P38904 1435 aa0.87□□□□□ -2.27
VPS55YJR044C SNT2P53127 1403 aa0.87□□□□□ -2.27
VPS55YJR044C CDC39P25655 2108 aaKnown RBP0.86□□□□□ -2.27
VPS55YJR044C MAK31P23059 88 aa0.86□□□□□ -2.27
VPS55YJR044C MRS4P23500 304 aa0.86□□□□□ -2.27
VPS55YJR044C YEL014CP39999 101 aa0.86□□□□□ -2.27
VPS55YJR044C GAT4P40569 121 aa0.86□□□□□ -2.27
VPS55YJR044C IRC19Q07843 230 aa0.86□□□□□ -2.27
VPS55YJR044C CSI2Q08054 341 aa0.86□□□□□ -2.27
VPS55YJR044C VAM10Q08474 114 aa0.86□□□□□ -2.27
VPS55YJR044C WIP1Q2V2P8 89 aa0.86□□□□□ -2.27
VPS55YJR044C SCS22Q6Q595 175 aa0.86□□□□□ -2.27
VPS55YJR044C UBR2Q07963 1872 aa0.86□□□□□ -2.27
VPS55YJR044C INO4P13902 151 aa0.85□□□□□ -2.27
VPS55YJR044C HYP2P23301 157 aaKnown RBP0.85□□□□□ -2.27
VPS55YJR044C RPB7P34087 171 aa0.85□□□□□ -2.27
VPS55YJR044C RPL14AP36105 138 aaKnown RBP0.85□□□□□ -2.27
VPS55YJR044C YKR045CP36138 183 aa0.85□□□□□ -2.27
VPS55YJR044C SRL3P36167 246 aa0.85□□□□□ -2.27
VPS55YJR044C RPL14BP38754 138 aaKnown RBP0.85□□□□□ -2.27
VPS55YJR044C TSC11P40061 1430 aa0.85□□□□□ -2.27
VPS55YJR044C HYR1P40581 163 aaKnown RBP0.85□□□□□ -2.27
VPS55YJR044C ELP6Q04868 273 aa0.85□□□□□ -2.27
VPS55YJR044C SOM1Q05676 74 aa0.85□□□□□ -2.27
VPS55YJR044C YDL241WQ07738 123 aa0.85□□□□□ -2.27
VPS55YJR044C TY1B-HO13535 1793 aa0.85□□□□□ -2.27
VPS55YJR044C KIN28P06242 306 aa0.84□□□□□ -2.27
VPS55YJR044C GSP1P32835 219 aaKnown RBP0.84□□□□□ -2.27
VPS55YJR044C YKR070WP36151 352 aaKnown RBP0.84□□□□□ -2.27
VPS55YJR044C HPA3P39979 161 aa0.84□□□□□ -2.27
VPS55YJR044C RGI1P40043 161 aaPredicted RBP0.84□□□□□ -2.27
VPS55YJR044C MPM1P40364 252 aa0.84□□□□□ -2.27
VPS55YJR044C YGR164WP53291 111 aa0.84□□□□□ -2.27
VPS55YJR044C NAT5Q08689 176 aa0.84□□□□□ -2.27
VPS55YJR044C YOR385WQ08909 290 aa0.84□□□□□ -2.27
VPS55YJR044C YOR097CQ12274 175 aaPredicted RBP0.84□□□□□ -2.27
VPS55YJR044C YLR099W-AQ3E798 87 aa0.84□□□□□ -2.27
VPS55YJR044C YNL146C-AQ3E7Z1 64 aa0.84□□□□□ -2.27
VPS55YJR044C TOP2P06786 1428 aaKnown RBP0.83□□□□□ -2.28
VPS55YJR044C TRM732Q03496 1420 aa0.83□□□□□ -2.28
VPS55YJR044C YOR304C-AO14468 76 aa0.83□□□□□ -2.28
VPS55YJR044C COX5BP00425 151 aa0.83□□□□□ -2.28
VPS55YJR044C ANB1P19211 157 aa0.83□□□□□ -2.28
VPS55YJR044C FYV5P25585 152 aa0.83□□□□□ -2.28
VPS55YJR044C YCR050CP25630 102 aa0.83□□□□□ -2.28
VPS55YJR044C HYM1P32464 399 aa0.83□□□□□ -2.28
VPS55YJR044C HSP150P32478 413 aa0.83□□□□□ -2.28
VPS55YJR044C QCR10P37299 77 aa0.83□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms