RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C YGR050CP53231 118 aa1.43□□□□□ -2.18
VPS35YJL154C TIM13P53299 105 aa1.43□□□□□ -2.18
VPS35YJL154C AIM11P87275 137 aa1.43□□□□□ -2.18
VPS35YJL154C YPR114WQ06107 315 aa1.43□□□□□ -2.18
VPS35YJL154C SYC1Q08553 188 aaPredicted RBP1.43□□□□□ -2.18
VPS35YJL154C YDL180WQ12301 547 aa1.43□□□□□ -2.18
VPS35YJL154C YGL194C-AQ2V2P6 80 aa1.43□□□□□ -2.18
VPS35YJL154C SIR2P06700 562 aa1.43□□□□□ -2.18
VPS35YJL154C RPL30P14120 105 aaKnown RBP1.43□□□□□ -2.18
VPS35YJL154C YOR062CP36025 268 aa1.43□□□□□ -2.18
VPS35YJL154C SKG1P36169 355 aa1.43□□□□□ -2.18
VPS35YJL154C ETR1P38071 380 aa1.43□□□□□ -2.18
VPS35YJL154C SFT1P43682 97 aa1.43□□□□□ -2.18
VPS35YJL154C DIE2P50076 525 aa1.43□□□□□ -2.18
VPS35YJL154C YNL010WP53981 241 aaKnown RBP1.43□□□□□ -2.18
VPS35YJL154C EMI1Q04406 187 aa1.43□□□□□ -2.18
VPS35YJL154C YLR042CQ07990 161 aa1.43□□□□□ -2.18
VPS35YJL154C FCY1Q12178 158 aa1.43□□□□□ -2.18
VPS35YJL154C OCA6Q12454 224 aa1.43□□□□□ -2.18
VPS35YJL154C SAS5Q99314 248 aa1.43□□□□□ -2.18
VPS35YJL154C YLR462WO13556 202 aa1.42□□□□□ -2.18
VPS35YJL154C MBF1O14467 151 aaKnown RBP1.42□□□□□ -2.18
VPS35YJL154C ANB1P19211 157 aa1.42□□□□□ -2.18
VPS35YJL154C ECM31P38122 312 aa1.42□□□□□ -2.18
VPS35YJL154C YEA6P39953 335 aa1.42□□□□□ -2.18
VPS35YJL154C SPO73P40031 143 aa1.42□□□□□ -2.18
VPS35YJL154C ARP3P47117 449 aaKnown RBP1.42□□□□□ -2.18
VPS35YJL154C YGL034CP53186 121 aa1.42□□□□□ -2.18
VPS35YJL154C RNH202Q05635 350 aa1.42□□□□□ -2.18
VPS35YJL154C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
VPS35YJL154C GTT2Q12390 233 aa1.42□□□□□ -2.18
VPS35YJL154C YNL277W-AQ3E7Z0 62 aa1.42□□□□□ -2.18
VPS35YJL154C YHR214C-EQ8TGK0 99 aa1.42□□□□□ -2.18
VPS35YJL154C YRA2P36036 203 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
VPS35YJL154C SHB17P36136 271 aaKnown RBP1.42□□□□□ -2.18
VPS35YJL154C FIP1P45976 327 aa1.42□□□□□ -2.18
VPS35YJL154C MDM34P53083 459 aa1.42□□□□□ -2.18
VPS35YJL154C YMR099CQ03161 297 aaKnown RBP1.42□□□□□ -2.18
VPS35YJL154C MIX17Q03667 156 aa1.42□□□□□ -2.18
VPS35YJL154C DGK1Q12382 290 aa1.42□□□□□ -2.18
VPS35YJL154C YPL247CQ12523 523 aa1.42□□□□□ -2.18
VPS35YJL154C YCR075W-AQ3E830 75 aa1.42□□□□□ -2.18
VPS35YJL154C DYN1P36022 4092 aa1.41□□□□□ -2.18
VPS35YJL154C PEX4P29340 183 aa1.41□□□□□ -2.18
VPS35YJL154C TIF34P40217 347 aaKnown RBP1.41□□□□□ -2.18
VPS35YJL154C GON7P46984 123 aa1.41□□□□□ -2.18
VPS35YJL154C TTI2P47168 421 aa1.41□□□□□ -2.18
VPS35YJL154C DSK2P48510 373 aa1.41□□□□□ -2.18
VPS35YJL154C ERV29P53337 310 aa1.41□□□□□ -2.18
VPS35YJL154C YNL033WP53964 284 aa1.41□□□□□ -2.18
VPS35YJL154C YNL019CP53975 284 aa1.41□□□□□ -2.18
VPS35YJL154C GRH1Q04410 372 aaKnown RBP1.41□□□□□ -2.18
VPS35YJL154C TVP18Q04767 167 aa1.41□□□□□ -2.18
VPS35YJL154C COA4Q05809 96 aa1.41□□□□□ -2.18
VPS35YJL154C Q0255P03881 472 aa1.41□□□□□ -2.18
VPS35YJL154C ADH3P07246 375 aaKnown RBP1.41□□□□□ -2.18
VPS35YJL154C TIR1P10863 254 aa1.41□□□□□ -2.18
VPS35YJL154C CKS1P20486 150 aaKnown RBP1.41□□□□□ -2.18
VPS35YJL154C MAG1P22134 296 aaKnown RBP1.41□□□□□ -2.18
VPS35YJL154C UTR5P32630 166 aa1.41□□□□□ -2.18
VPS35YJL154C RCN1P36054 211 aa1.41□□□□□ -2.18
VPS35YJL154C YHR140WP38842 239 aa1.41□□□□□ -2.18
VPS35YJL154C YER181CP40097 107 aa1.41□□□□□ -2.18
VPS35YJL154C YGL230CP53074 147 aa1.41□□□□□ -2.18
VPS35YJL154C YNR062CP53748 327 aa1.41□□□□□ -2.18
VPS35YJL154C FCF1Q05498 189 aaPredicted RBP1.41□□□□□ -2.18
VPS35YJL154C NAT3Q06504 195 aa1.41□□□□□ -2.18
VPS35YJL154C SPC3Q12133 184 aa1.41□□□□□ -2.18
VPS35YJL154C HUT1Q12520 339 aa1.41□□□□□ -2.18
VPS35YJL154C TSC3Q3E790 80 aa1.41□□□□□ -2.18
VPS35YJL154C REP2P03872 296 aa1.4□□□□□ -2.18
VPS35YJL154C SPT14P32363 452 aa1.4□□□□□ -2.18
VPS35YJL154C RPL14AP36105 138 aaKnown RBP1.4□□□□□ -2.18
VPS35YJL154C ERV15P38312 142 aa1.4□□□□□ -2.18
VPS35YJL154C RPL14BP38754 138 aaKnown RBP1.4□□□□□ -2.18
VPS35YJL154C RPB11P38902 120 aa1.4□□□□□ -2.18
VPS35YJL154C SNU13P39990 126 aaKnown RBP1.4□□□□□ -2.18
VPS35YJL154C YER189WP40104 122 aa1.4□□□□□ -2.18
VPS35YJL154C NSE4P43124 402 aa1.4□□□□□ -2.18
VPS35YJL154C RDS3Q06835 107 aaPredicted RBP1.4□□□□□ -2.18
VPS35YJL154C YOR097CQ12274 175 aaPredicted RBP1.4□□□□□ -2.18
VPS35YJL154C BOL1Q3E793 110 aa1.4□□□□□ -2.18
VPS35YJL154C KTI11Q3E840 82 aa1.4□□□□□ -2.18
VPS35YJL154C HYP2P23301 157 aaKnown RBP1.4□□□□□ -2.19
VPS35YJL154C YBR090CP38253 122 aa1.4□□□□□ -2.19
VPS35YJL154C YHR130CP38834 111 aa1.4□□□□□ -2.19
VPS35YJL154C YEL075CP39972 122 aa1.4□□□□□ -2.19
VPS35YJL154C YER084WP40057 128 aa1.4□□□□□ -2.19
VPS35YJL154C GTT1P40582 234 aa1.4□□□□□ -2.19
VPS35YJL154C CAT5P41735 233 aa1.4□□□□□ -2.19
VPS35YJL154C GPI2P46961 280 aa1.4□□□□□ -2.19
VPS35YJL154C PIR5P46999 287 aa1.4□□□□□ -2.19
VPS35YJL154C SBH1P52870 82 aa1.4□□□□□ -2.19
VPS35YJL154C HRT1Q08273 121 aa1.4□□□□□ -2.19
VPS35YJL154C SRP21P32342 167 aa1.39□□□□□ -2.19
VPS35YJL154C SDH4P37298 181 aa1.39□□□□□ -2.19
VPS35YJL154C AST2P39945 430 aaKnown RBP1.39□□□□□ -2.19
VPS35YJL154C IRC22P40006 225 aa1.39□□□□□ -2.19
VPS35YJL154C YNL200CP40165 246 aaKnown RBP1.39□□□□□ -2.19
VPS35YJL154C SKI6P46948 246 aaPredicted RBP1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms