RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C YOR097CQ12274 175 aaPredicted RBP1.46□□□□□ -2.18
RTT101YJL047C RPS19AP07280 144 aaKnown RBP1.45□□□□□ -2.18
RTT101YJL047C RPS19BP07281 144 aaPredicted RBP1.45□□□□□ -2.18
RTT101YJL047C UBC5P15732 148 aa1.45□□□□□ -2.18
RTT101YJL047C MDH2P22133 377 aa1.45□□□□□ -2.18
RTT101YJL047C YBR090CP38253 122 aa1.45□□□□□ -2.18
RTT101YJL047C AIM18P38884 321 aa1.45□□□□□ -2.18
RTT101YJL047C TVP23P38962 199 aa1.45□□□□□ -2.18
RTT101YJL047C GAA1P39012 614 aa1.45□□□□□ -2.18
RTT101YJL047C NSE4P43124 402 aa1.45□□□□□ -2.18
RTT101YJL047C YGR026WP53217 278 aa1.45□□□□□ -2.18
RTT101YJL047C RCE1Q03530 315 aa1.45□□□□□ -2.18
RTT101YJL047C YDL241WQ07738 123 aa1.45□□□□□ -2.18
RTT101YJL047C MIG1P27705 504 aa1.45□□□□□ -2.18
RTT101YJL047C YET1P35723 206 aa1.45□□□□□ -2.18
RTT101YJL047C MRPL15P36523 253 aa1.45□□□□□ -2.18
RTT101YJL047C YPI1P43587 155 aa1.45□□□□□ -2.18
RTT101YJL047C RRT7Q07829 113 aa1.45□□□□□ -2.18
RTT101YJL047C SCP1Q08873 200 aa1.45□□□□□ -2.18
RTT101YJL047C YOR385WQ08909 290 aa1.45□□□□□ -2.18
RTT101YJL047C SCS22Q6Q595 175 aa1.45□□□□□ -2.18
RTT101YJL047C TY1B-BRQ12193 1756 aa1.45□□□□□ -2.18
RTT101YJL047C ADE6P38972 1358 aaKnown RBP1.45□□□□□ -2.18
RTT101YJL047C YEA6P39953 335 aa1.44□□□□□ -2.18
RTT101YJL047C PAM16P42949 149 aa1.44□□□□□ -2.18
RTT101YJL047C GNA1P43577 159 aaPredicted RBP1.44□□□□□ -2.18
RTT101YJL047C MZM1Q03429 123 aaPredicted RBP1.44□□□□□ -2.18
RTT101YJL047C ATG10Q07879 167 aa1.44□□□□□ -2.18
RTT101YJL047C HAP3P13434 144 aa1.44□□□□□ -2.18
RTT101YJL047C YER084WP40057 128 aa1.44□□□□□ -2.18
RTT101YJL047C YIR035CP40579 254 aa1.44□□□□□ -2.18
RTT101YJL047C YOR015WQ12169 119 aa1.44□□□□□ -2.18
RTT101YJL047C HYP2P23301 157 aaKnown RBP1.43□□□□□ -2.18
RTT101YJL047C CCS1P40202 249 aaKnown RBP1.43□□□□□ -2.18
RTT101YJL047C FLX1P40464 311 aa1.43□□□□□ -2.18
RTT101YJL047C YFR035CP43608 114 aa1.43□□□□□ -2.18
RTT101YJL047C SPG1P50088 95 aa1.43□□□□□ -2.18
RTT101YJL047C YGL260WP53056 76 aa1.43□□□□□ -2.18
RTT101YJL047C YMR103CQ04436 120 aa1.43□□□□□ -2.18
RTT101YJL047C YGL194C-AQ2V2P6 80 aa1.43□□□□□ -2.18
RTT101YJL047C YCR075W-AQ3E830 75 aa1.43□□□□□ -2.18
RTT101YJL047C RPS23AP0CX29 145 aaKnown RBP1.43□□□□□ -2.18
RTT101YJL047C RPS23BP0CX30 145 aa1.43□□□□□ -2.18
RTT101YJL047C INO4P13902 151 aa1.43□□□□□ -2.18
RTT101YJL047C ERV15P38312 142 aa1.43□□□□□ -2.18
RTT101YJL047C YEL067CP39978 195 aa1.43□□□□□ -2.18
RTT101YJL047C NHP10Q03435 203 aa1.43□□□□□ -2.18
RTT101YJL047C UIP4Q08926 304 aa1.43□□□□□ -2.18
RTT101YJL047C PDR10P51533 1564 aa1.43□□□□□ -2.18
RTT101YJL047C MYO1P08964 1928 aa1.42□□□□□ -2.18
RTT101YJL047C COX5BP00425 151 aa1.42□□□□□ -2.18
RTT101YJL047C RAS2P01120 322 aaKnown RBP1.42□□□□□ -2.18
RTT101YJL047C HSP26P15992 214 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
RTT101YJL047C MAK31P23059 88 aa1.42□□□□□ -2.18
RTT101YJL047C RPL33BP41056 107 aaKnown RBP1.42□□□□□ -2.18
RTT101YJL047C BOL2P53082 120 aa1.42□□□□□ -2.18
RTT101YJL047C SOM1Q05676 74 aa1.42□□□□□ -2.18
RTT101YJL047C YPR174CQ06616 221 aaPredicted RBP1.42□□□□□ -2.18
RTT101YJL047C IRC19Q07843 230 aa1.42□□□□□ -2.18
RTT101YJL047C TMC1Q08422 150 aaPredicted RBP1.42□□□□□ -2.18
RTT101YJL047C GTT2Q12390 233 aa1.42□□□□□ -2.18
RTT101YJL047C RPL13AQ12690 199 aaPredicted RBP1.42□□□□□ -2.18
RTT101YJL047C MSB2P32334 1306 aa1.42□□□□□ -2.18
RTT101YJL047C UTH1P36135 365 aa1.42□□□□□ -2.18
RTT101YJL047C QCR10P37299 77 aa1.42□□□□□ -2.18
RTT101YJL047C KNH1P50112 268 aa1.42□□□□□ -2.18
RTT101YJL047C ERG25P53045 309 aa1.42□□□□□ -2.18
RTT101YJL047C YGR164WP53291 111 aa1.42□□□□□ -2.18
RTT101YJL047C KEI1Q06346 221 aa1.42□□□□□ -2.18
RTT101YJL047C ATG41Q12048 136 aa1.42□□□□□ -2.18
RTT101YJL047C MED11Q99278 115 aa1.42□□□□□ -2.18
RTT101YJL047C ATG40Q99325 256 aa1.42□□□□□ -2.18
RTT101YJL047C YLR236CA0A023PZG4 107 aa1.41□□□□□ -2.18
RTT101YJL047C YGL041W-AP0C5N3 154 aa1.41□□□□□ -2.18
RTT101YJL047C YCR099CP25657 155 aa1.41□□□□□ -2.18
RTT101YJL047C YEL045CP32616 141 aa1.41□□□□□ -2.18
RTT101YJL047C EMP24P32803 203 aaKnown RBP1.41□□□□□ -2.18
RTT101YJL047C SPO73P40031 143 aa1.41□□□□□ -2.18
RTT101YJL047C LSM8P47093 109 aaKnown RBP1.41□□□□□ -2.18
RTT101YJL047C PIR1Q03178 341 aa1.41□□□□□ -2.18
RTT101YJL047C UPS3Q04006 179 aa1.41□□□□□ -2.18
RTT101YJL047C YHP1Q04116 353 aa1.41□□□□□ -2.18
RTT101YJL047C YPR195CQ06594 109 aa1.41□□□□□ -2.18
RTT101YJL047C YPR013CQ12145 317 aa1.41□□□□□ -2.18
RTT101YJL047C FYV5P25585 152 aa1.41□□□□□ -2.18
RTT101YJL047C PEX4P29340 183 aa1.41□□□□□ -2.18
RTT101YJL047C TMA19P35691 167 aaKnown RBP1.41□□□□□ -2.18
RTT101YJL047C YKL044WP36092 106 aa1.41□□□□□ -2.18
RTT101YJL047C PHO88P38264 188 aaPredicted RBP1.41□□□□□ -2.18
RTT101YJL047C YFL012WP43580 148 aa1.41□□□□□ -2.18
RTT101YJL047C YJR146WP47174 117 aa1.41□□□□□ -2.18
RTT101YJL047C THG1P53215 237 aaKnown RBP1.41□□□□□ -2.18
RTT101YJL047C SEC7P11075 2009 aaKnown RBP1.41□□□□□ -2.18
RTT101YJL047C RSF2P46974 1380 aa1.4□□□□□ -2.18
RTT101YJL047C GSC2P40989 1895 aa1.4□□□□□ -2.18
RTT101YJL047C PRE1P22141 198 aaKnown RBP1.4□□□□□ -2.18
RTT101YJL047C SCM4P32564 187 aa1.4□□□□□ -2.18
RTT101YJL047C SNF11P38956 169 aa1.4□□□□□ -2.18
RTT101YJL047C YCL001W-AP87012 153 aa1.4□□□□□ -2.18
RTT101YJL047C LYS2P07702 1392 aa1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms