RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C DOG2P38773 246 aa2.4□□□□□ -2.03
NMD2YHR077C DOG1P38774 246 aa2.4□□□□□ -2.03
NMD2YHR077C SGN1P40561 250 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
NMD2YHR077C CSI2Q08054 341 aa2.4□□□□□ -2.03
NMD2YHR077C LSO2Q3E772 92 aaKnown RBP2.4□□□□□ -2.03
NMD2YHR077C RAD23P32628 398 aaKnown RBP2.39□□□□□ -2.03
NMD2YHR077C YBL071CP38185 102 aa2.39□□□□□ -2.03
NMD2YHR077C GPI18P38211 433 aa2.39□□□□□ -2.03
NMD2YHR077C YER134CP40081 178 aa2.39□□□□□ -2.03
NMD2YHR077C ADE8P04161 214 aa2.39□□□□□ -2.03
NMD2YHR077C DFR1P07807 211 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
NMD2YHR077C RPS2P25443 254 aaKnown RBP2.39□□□□□ -2.03
NMD2YHR077C YPS1P32329 569 aa2.39□□□□□ -2.03
NMD2YHR077C YMR141CP40211 102 aa2.39□□□□□ -2.03
NMD2YHR077C AIM24P47127 394 aa2.39□□□□□ -2.03
NMD2YHR077C YGR025WP53216 100 aa2.39□□□□□ -2.03
NMD2YHR077C ADH6Q04894 360 aaKnown RBP2.39□□□□□ -2.03
NMD2YHR077C MHR1Q06630 226 aa2.39□□□□□ -2.03
NMD2YHR077C DCN1Q12395 269 aa2.39□□□□□ -2.03
NMD2YHR077C SEC4P07560 215 aaKnown RBP2.39□□□□□ -2.03
NMD2YHR077C CUP2P15315 225 aa2.39□□□□□ -2.03
NMD2YHR077C SUA7P29055 345 aaPredicted RBP2.39□□□□□ -2.03
NMD2YHR077C GSP1P32835 219 aaKnown RBP2.39□□□□□ -2.03
NMD2YHR077C GSP2P32836 220 aaKnown RBP2.39□□□□□ -2.03
NMD2YHR077C SFT2P38166 215 aa2.39□□□□□ -2.03
NMD2YHR077C DUG3P53871 357 aa2.39□□□□□ -2.03
NMD2YHR077C APS2Q00381 147 aa2.39□□□□□ -2.03
NMD2YHR077C ARC18Q05933 178 aaKnown RBP2.39□□□□□ -2.03
NMD2YHR077C ATX2Q12067 313 aa2.39□□□□□ -2.03
NMD2YHR077C RKI1Q12189 258 aa2.39□□□□□ -2.03
NMD2YHR077C YCL001W-BQ96VH2 84 aa2.39□□□□□ -2.03
NMD2YHR077C YLR302CO13544 120 aa2.38□□□□□ -2.03
NMD2YHR077C MRS1P07266 363 aa2.38□□□□□ -2.03
NMD2YHR077C DDI2P0CH63 225 aa2.38□□□□□ -2.03
NMD2YHR077C DDI3P0CH64 225 aa2.38□□□□□ -2.03
NMD2YHR077C IES6P32617 166 aa2.38□□□□□ -2.03
NMD2YHR077C YIL012WP40551 113 aa2.38□□□□□ -2.03
NMD2YHR077C NCA3P46955 337 aa2.38□□□□□ -2.03
NMD2YHR077C YGR219WP53307 113 aa2.38□□□□□ -2.03
NMD2YHR077C SSU72P53538 206 aaPredicted RBP2.38□□□□□ -2.03
NMD2YHR077C YOR105WQ08504 108 aa2.38□□□□□ -2.03
NMD2YHR077C MRPL31P14063 131 aaPredicted RBP2.38□□□□□ -2.03
NMD2YHR077C HMX1P32339 317 aa2.38□□□□□ -2.03
NMD2YHR077C YNL200CP40165 246 aaKnown RBP2.38□□□□□ -2.03
NMD2YHR077C YIR020CP40575 100 aa2.38□□□□□ -2.03
NMD2YHR077C YGR151CP53287 111 aa2.38□□□□□ -2.03
NMD2YHR077C TIM10P87108 93 aa2.38□□□□□ -2.03
NMD2YHR077C MRX11Q03079 207 aa2.38□□□□□ -2.03
NMD2YHR077C PBP4Q07362 185 aaKnown RBP2.38□□□□□ -2.03
NMD2YHR077C TMC1Q08422 150 aaPredicted RBP2.38□□□□□ -2.03
NMD2YHR077C COX17Q12287 69 aa2.38□□□□□ -2.03
NMD2YHR077C BPH1P25356 2167 aa2.38□□□□□ -2.03
NMD2YHR077C HMRA1P0CY11 126 aa2.37□□□□□ -2.03
NMD2YHR077C MRPL44P19956 98 aa2.37□□□□□ -2.03
NMD2YHR077C PET8P38921 284 aa2.37□□□□□ -2.03
NMD2YHR077C YIL077CP40508 320 aa2.37□□□□□ -2.03
NMD2YHR077C COX18P53239 316 aa2.37□□□□□ -2.03
NMD2YHR077C SWT21P53873 357 aaPredicted RBP2.37□□□□□ -2.03
NMD2YHR077C SUR7P54003 302 aa2.37□□□□□ -2.03
NMD2YHR077C YMR317WQ04893 1140 aa2.37□□□□□ -2.03
NMD2YHR077C NDE2Q07500 545 aa2.37□□□□□ -2.03
NMD2YHR077C YDR215CQ12240 137 aa2.37□□□□□ -2.03
NMD2YHR077C COA6Q3E846 104 aa2.37□□□□□ -2.03
NMD2YHR077C CYC3P06182 269 aa2.37□□□□□ -2.03
NMD2YHR077C YER190C-BP0CX94 160 aa2.37□□□□□ -2.03
NMD2YHR077C YEL077W-AP0CX95 160 aa2.37□□□□□ -2.03
NMD2YHR077C YGR296C-BP0CX96 160 aa2.37□□□□□ -2.03
NMD2YHR077C YPL283W-BP0CX97 160 aa2.37□□□□□ -2.03
NMD2YHR077C YPR204C-AP0CX98 160 aa2.37□□□□□ -2.03
NMD2YHR077C YNR071CP53757 342 aa2.37□□□□□ -2.03
NMD2YHR077C FSF1Q12029 327 aaKnown RBP2.37□□□□□ -2.03
NMD2YHR077C YDL009CQ12210 107 aa2.37□□□□□ -2.03
NMD2YHR077C RDL1Q12305 139 aaKnown RBP2.37□□□□□ -2.03
NMD2YHR077C VMA11P32842 164 aa2.37□□□□□ -2.03
NMD2YHR077C DAD2P36162 133 aa2.37□□□□□ -2.03
NMD2YHR077C YDL157CQ12082 118 aa2.37□□□□□ -2.03
NMD2YHR077C YPR013CQ12145 317 aa2.37□□□□□ -2.03
NMD2YHR077C SMT3Q12306 101 aaKnown RBP2.37□□□□□ -2.03
NMD2YHR077C RPS22BQ3E7Y3 130 aaKnown RBP2.37□□□□□ -2.03
NMD2YHR077C PAU16P35994 123 aa2.36□□□□□ -2.03
NMD2YHR077C YKR032WP36127 104 aa2.36□□□□□ -2.03
NMD2YHR077C TEM1P38987 245 aa2.36□□□□□ -2.03
NMD2YHR077C RPA43P46669 326 aa2.36□□□□□ -2.03
NMD2YHR077C LCB3P47013 409 aa2.36□□□□□ -2.03
NMD2YHR077C CGR1P53188 120 aa2.36□□□□□ -2.03
NMD2YHR077C YGR045CP53229 120 aa2.36□□□□□ -2.03
NMD2YHR077C GIM5Q04493 163 aa2.36□□□□□ -2.03
NMD2YHR077C Q0297Q9ZZV8 51 aa2.36□□□□□ -2.03
NMD2YHR077C FUN14P18411 198 aa2.36□□□□□ -2.03
NMD2YHR077C IRC22P40006 225 aa2.36□□□□□ -2.03
NMD2YHR077C YFR045WP43617 309 aa2.36□□□□□ -2.03
NMD2YHR077C YNR064CP53750 290 aa2.36□□□□□ -2.03
NMD2YHR077C TPT1Q12272 230 aaKnown RBP2.36□□□□□ -2.03
NMD2YHR077C SNU13P39990 126 aaKnown RBP2.36□□□□□ -2.03
NMD2YHR077C SBH2P52871 88 aa2.36□□□□□ -2.03
NMD2YHR077C NAT5Q08689 176 aa2.36□□□□□ -2.03
NMD2YHR077C TIM18Q08749 192 aa2.36□□□□□ -2.03
NMD2YHR077C CSM4Q08955 156 aa2.36□□□□□ -2.03
NMD2YHR077C RPL11AP0C0W9 174 aaKnown RBP2.35□□□□□ -2.03
NMD2YHR077C SEC11P15367 167 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms