RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W CSM4Q08955 156 aa5.47□□□□□ -1.53
RGD2YFL047W SOR1P35497 357 aaKnown RBP5.46□□□□□ -1.54
RGD2YFL047W SFT2P38166 215 aa5.46□□□□□ -1.54
RGD2YFL047W YBL071CP38185 102 aa5.46□□□□□ -1.54
RGD2YFL047W MRX11Q03079 207 aa5.46□□□□□ -1.54
RGD2YFL047W GIM5Q04493 163 aa5.46□□□□□ -1.54
RGD2YFL047W SOR2Q07786 357 aa5.46□□□□□ -1.54
RGD2YFL047W YDL157CQ12082 118 aa5.46□□□□□ -1.54
RGD2YFL047W RPL31AP0C2H8 113 aaKnown RBP5.45□□□□□ -1.54
RGD2YFL047W RPL31BP0C2H9 113 aaKnown RBP5.45□□□□□ -1.54
RGD2YFL047W ZRT1P32804 376 aa5.45□□□□□ -1.54
RGD2YFL047W ADH5P38113 351 aaKnown RBP5.45□□□□□ -1.54
RGD2YFL047W ALG14P38242 237 aa5.45□□□□□ -1.54
RGD2YFL047W GZF3P42944 551 aaKnown RBP5.45□□□□□ -1.54
RGD2YFL047W YDL183CP48569 320 aa5.45□□□□□ -1.54
RGD2YFL047W TRI1Q05024 226 aa5.45□□□□□ -1.54
RGD2YFL047W CSI2Q08054 341 aa5.45□□□□□ -1.54
RGD2YFL047W SDS23P53172 527 aa5.45□□□□□ -1.54
RGD2YFL047W AYT1Q12226 474 aa5.45□□□□□ -1.54
RGD2YFL047W YDR215CQ12240 137 aa5.45□□□□□ -1.54
RGD2YFL047W DAL80P26343 269 aa5.44□□□□□ -1.54
RGD2YFL047W BRP1P53194 125 aa5.44□□□□□ -1.54
RGD2YFL047W YNL234WP53857 426 aa5.44□□□□□ -1.54
RGD2YFL047W MRS1P07266 363 aa5.44□□□□□ -1.54
RGD2YFL047W MRPL31P14063 131 aaPredicted RBP5.44□□□□□ -1.54
RGD2YFL047W UIP3P39547 235 aa5.44□□□□□ -1.54
RGD2YFL047W YNL200CP40165 246 aaKnown RBP5.44□□□□□ -1.54
RGD2YFL047W MIX17Q03667 156 aa5.44□□□□□ -1.54
RGD2YFL047W NDE2Q07500 545 aa5.44□□□□□ -1.54
RGD2YFL047W WSC3Q12215 556 aa5.44□□□□□ -1.54
RGD2YFL047W RPL23AP0CX41 137 aaKnown RBP5.43□□□□□ -1.54
RGD2YFL047W RPL23BP0CX42 137 aaKnown RBP5.43□□□□□ -1.54
RGD2YFL047W YPT10P38146 199 aa5.43□□□□□ -1.54
RGD2YFL047W HST4P53688 370 aa5.43□□□□□ -1.54
RGD2YFL047W RXT3Q07458 294 aa5.43□□□□□ -1.54
RGD2YFL047W PAU23Q07987 124 aa5.43□□□□□ -1.54
RGD2YFL047W FSF1Q12029 327 aaKnown RBP5.43□□□□□ -1.54
RGD2YFL047W PAU17Q12370 124 aa5.43□□□□□ -1.54
RGD2YFL047W ECM14P38836 430 aa5.42□□□□□ -1.54
RGD2YFL047W YNL046WP53956 172 aa5.42□□□□□ -1.54
RGD2YFL047W CNL1Q06333 122 aa5.42□□□□□ -1.54
RGD2YFL047W ATG33Q06485 197 aa5.42□□□□□ -1.54
RGD2YFL047W ATO3Q12359 275 aa5.42□□□□□ -1.54
RGD2YFL047W YHR213WP0CI67 198 aa5.42□□□□□ -1.54
RGD2YFL047W HAP3P13434 144 aa5.42□□□□□ -1.54
RGD2YFL047W SEC11P15367 167 aa5.42□□□□□ -1.54
RGD2YFL047W SGN1P40561 250 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
RGD2YFL047W YFR045WP43617 309 aa5.42□□□□□ -1.54
RGD2YFL047W YGL118CP53132 145 aa5.42□□□□□ -1.54
RGD2YFL047W YDL218WQ07629 317 aa5.42□□□□□ -1.54
RGD2YFL047W RKI1Q12189 258 aa5.42□□□□□ -1.54
RGD2YFL047W SCS22Q6Q595 175 aa5.42□□□□□ -1.54
RGD2YFL047W DDI2P0CH63 225 aa5.41□□□□□ -1.54
RGD2YFL047W DDI3P0CH64 225 aa5.41□□□□□ -1.54
RGD2YFL047W UTR5P32630 166 aa5.41□□□□□ -1.54
RGD2YFL047W YER188WP40103 239 aa5.41□□□□□ -1.54
RGD2YFL047W HAC1P41546 238 aa5.41□□□□□ -1.54
RGD2YFL047W YGL230CP53074 147 aa5.41□□□□□ -1.54
RGD2YFL047W ARC18Q05933 178 aaKnown RBP5.41□□□□□ -1.54
RGD2YFL047W YDL009CQ12210 107 aa5.41□□□□□ -1.54
RGD2YFL047W TMA7Q3E764 64 aaKnown RBP5.41□□□□□ -1.54
RGD2YFL047W IRA1P18963 3092 aa5.41□□□□□ -1.54
RGD2YFL047W CYC3P06182 269 aa5.41□□□□□ -1.54
RGD2YFL047W VMA16P23968 213 aa5.41□□□□□ -1.54
RGD2YFL047W MTR2P34232 184 aaKnown RBP5.41□□□□□ -1.54
RGD2YFL047W GLE2P40066 365 aa5.41□□□□□ -1.54
RGD2YFL047W YMR141CP40211 102 aa5.41□□□□□ -1.54
RGD2YFL047W YGL260WP53056 76 aa5.41□□□□□ -1.54
RGD2YFL047W YNR064CP53750 290 aa5.41□□□□□ -1.54
RGD2YFL047W SDH7Q04401 133 aa5.41□□□□□ -1.54
RGD2YFL047W SNA4Q07549 140 aa5.41□□□□□ -1.54
RGD2YFL047W YPL162CQ12042 273 aa5.41□□□□□ -1.54
RGD2YFL047W ADE8P04161 214 aa5.4□□□□□ -1.54
RGD2YFL047W YPS1P32329 569 aa5.4□□□□□ -1.54
RGD2YFL047W YGR151CP53287 111 aa5.4□□□□□ -1.54
RGD2YFL047W SWT21P53873 357 aaPredicted RBP5.4□□□□□ -1.54
RGD2YFL047W YCL048W-AQ2V2Q2 79 aa5.4□□□□□ -1.54
RGD2YFL047W MDM10P18409 493 aa5.39□□□□□ -1.55
RGD2YFL047W TIR2P33890 251 aa5.39□□□□□ -1.55
RGD2YFL047W YER121WP40076 114 aa5.39□□□□□ -1.55
RGD2YFL047W DAD4P69851 72 aa5.39□□□□□ -1.55
RGD2YFL047W WIP1Q2V2P8 89 aa5.39□□□□□ -1.55
RGD2YFL047W HTB2P02294 131 aa5.39□□□□□ -1.55
RGD2YFL047W YCR007CP25354 239 aa5.39□□□□□ -1.55
RGD2YFL047W SEC72P39742 193 aaKnown RBP5.39□□□□□ -1.55
RGD2YFL047W IMP2P46972 177 aa5.39□□□□□ -1.55
RGD2YFL047W YJL163CP46996 555 aa5.39□□□□□ -1.55
RGD2YFL047W MSC3Q05812 728 aa5.39□□□□□ -1.55
RGD2YFL047W TIM18Q08749 192 aa5.39□□□□□ -1.55
RGD2YFL047W FCY1Q12178 158 aa5.39□□□□□ -1.55
RGD2YFL047W COX2P00410 251 aa5.38□□□□□ -1.55
RGD2YFL047W CPT1P17898 393 aa5.38□□□□□ -1.55
RGD2YFL047W MSL1P40567 111 aaPredicted RBP5.38□□□□□ -1.55
RGD2YFL047W POP3P53833 195 aaPredicted RBP5.38□□□□□ -1.55
RGD2YFL047W TVP18Q04767 167 aa5.38□□□□□ -1.55
RGD2YFL047W IRC23Q08416 157 aa5.38□□□□□ -1.55
RGD2YFL047W COX17Q12287 69 aa5.38□□□□□ -1.55
RGD2YFL047W IES6P32617 166 aa5.38□□□□□ -1.55
RGD2YFL047W SEN1Q00416 2231 aaKnown RBP5.37□□□□□ -1.55
RGD2YFL047W HEM13P11353 328 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 85.5 ms