RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C SML1Q04964 104 aa0.77□□□□□ -2.29
SWI4YER111C YOR214CQ12282 236 aa0.77□□□□□ -2.29
SWI4YER111C YLR422WQ06409 1932 aa0.76□□□□□ -2.29
SWI4YER111C DSE2P38844 325 aa0.76□□□□□ -2.29
SWI4YER111C GLR1P41921 483 aaKnown RBP0.76□□□□□ -2.29
SWI4YER111C XPT1P47165 209 aa0.76□□□□□ -2.29
SWI4YER111C KNH1P50112 268 aa0.76□□□□□ -2.29
SWI4YER111C YNL033WP53964 284 aa0.76□□□□□ -2.29
SWI4YER111C HSP30P25619 332 aa0.76□□□□□ -2.29
SWI4YER111C TFC1P32367 649 aa0.76□□□□□ -2.29
SWI4YER111C NRG2P38082 220 aa0.76□□□□□ -2.29
SWI4YER111C RIM9Q04734 239 aa0.76□□□□□ -2.29
SWI4YER111C YPR174CQ06616 221 aaPredicted RBP0.76□□□□□ -2.29
SWI4YER111C FAB1P34756 2278 aa0.76□□□□□ -2.29
SWI4YER111C RPL30P14120 105 aaKnown RBP0.76□□□□□ -2.29
SWI4YER111C IDP1P21954 428 aaKnown RBP0.76□□□□□ -2.29
SWI4YER111C GSP2P32836 220 aaKnown RBP0.76□□□□□ -2.29
SWI4YER111C DAD3P69850 94 aa0.76□□□□□ -2.29
SWI4YER111C CGI121Q03705 181 aaKnown RBP0.76□□□□□ -2.29
SWI4YER111C YHR007C-AQ07074 71 aa0.76□□□□□ -2.29
SWI4YER111C UBI4P0CG63 381 aaKnown RBP0.75□□□□□ -2.29
SWI4YER111C HTD2P38790 280 aaKnown RBP0.75□□□□□ -2.29
SWI4YER111C SVP26P38869 228 aa0.75□□□□□ -2.29
SWI4YER111C GIM4P40005 111 aaKnown RBP0.75□□□□□ -2.29
SWI4YER111C APQ12P40532 138 aa0.75□□□□□ -2.29
SWI4YER111C ORM1P53224 222 aa0.75□□□□□ -2.29
SWI4YER111C BUD25P85052 153 aa0.75□□□□□ -2.29
SWI4YER111C PRP11Q07350 266 aaPredicted RBP0.75□□□□□ -2.29
SWI4YER111C EFG1Q3E705 233 aaKnown RBP0.75□□□□□ -2.29
SWI4YER111C BOL1Q3E793 110 aa0.75□□□□□ -2.29
SWI4YER111C YDR034W-BQ6Q5X2 51 aa0.75□□□□□ -2.29
SWI4YER111C QCR8P08525 94 aa0.75□□□□□ -2.29
SWI4YER111C ATP5P09457 212 aa0.75□□□□□ -2.29
SWI4YER111C DDI2P0CH63 225 aa0.75□□□□□ -2.29
SWI4YER111C DDI3P0CH64 225 aa0.75□□□□□ -2.29
SWI4YER111C SEC11P15367 167 aa0.75□□□□□ -2.29
SWI4YER111C NUF2P33895 451 aa0.75□□□□□ -2.29
SWI4YER111C SFK1P35735 353 aa0.75□□□□□ -2.29
SWI4YER111C RRT1P38192 103 aa0.75□□□□□ -2.29
SWI4YER111C PEP8P40335 379 aa0.75□□□□□ -2.29
SWI4YER111C YFR054CP43622 192 aa0.75□□□□□ -2.29
SWI4YER111C PKR1Q03880 122 aaKnown RBP0.75□□□□□ -2.29
SWI4YER111C ATP20Q12233 115 aa0.75□□□□□ -2.29
SWI4YER111C FMP23P38231 175 aa0.74□□□□□ -2.29
SWI4YER111C YEL028WP39989 153 aa0.74□□□□□ -2.29
SWI4YER111C CCC1P47818 322 aa0.74□□□□□ -2.29
SWI4YER111C SPC2Q04969 178 aa0.74□□□□□ -2.29
SWI4YER111C UIP4Q08926 304 aa0.74□□□□□ -2.29
SWI4YER111C COX8P04039 78 aa0.74□□□□□ -2.29
SWI4YER111C UPS2P35200 230 aa0.74□□□□□ -2.29
SWI4YER111C YBR219CP38317 127 aa0.74□□□□□ -2.29
SWI4YER111C FYV4P38783 130 aaPredicted RBP0.74□□□□□ -2.29
SWI4YER111C DLS1P40366 167 aa0.74□□□□□ -2.29
SWI4YER111C MOB1P40484 314 aa0.74□□□□□ -2.29
SWI4YER111C YGL204CP53089 101 aa0.74□□□□□ -2.29
SWI4YER111C LIP1Q03579 150 aa0.74□□□□□ -2.29
SWI4YER111C UPS3Q04006 179 aa0.74□□□□□ -2.29
SWI4YER111C ANT1Q06497 328 aa0.74□□□□□ -2.29
SWI4YER111C YEL067CP39978 195 aa0.74□□□□□ -2.29
SWI4YER111C YGR201CP42936 225 aa0.74□□□□□ -2.29
SWI4YER111C FIP1P45976 327 aa0.74□□□□□ -2.29
SWI4YER111C SYM1Q06563 197 aa0.74□□□□□ -2.29
SWI4YER111C FIT2Q08906 153 aa0.74□□□□□ -2.29
SWI4YER111C SHE2P36068 246 aaKnown RBP RIP-Chip data0.73□□□□□ -2.29not detected
SWI4YER111C POP7P38291 140 aa0.73□□□□□ -2.29
SWI4YER111C VMA22P38784 181 aa0.73□□□□□ -2.29
SWI4YER111C IPI1P38803 334 aaPredicted RBP0.73□□□□□ -2.29
SWI4YER111C CYC2P38909 366 aa0.73□□□□□ -2.29
SWI4YER111C YDC1Q02896 317 aa0.73□□□□□ -2.29
SWI4YER111C AYR1P40471 297 aa0.73□□□□□ -2.29
SWI4YER111C HHO1P53551 258 aa0.73□□□□□ -2.29
SWI4YER111C POP3P53833 195 aaPredicted RBP0.73□□□□□ -2.29
SWI4YER111C YKR045CP36138 183 aa0.72□□□□□ -2.29
SWI4YER111C YHL018WP38744 120 aaPredicted RBP0.72□□□□□ -2.29
SWI4YER111C MOG1P47123 218 aa0.72□□□□□ -2.29
SWI4YER111C YGR042WP53227 271 aa0.72□□□□□ -2.29
SWI4YER111C YDR278CQ05612 105 aa0.72□□□□□ -2.29
SWI4YER111C TMA19P35691 167 aaKnown RBP0.72□□□□□ -2.29
SWI4YER111C YEL073CP39974 107 aa0.72□□□□□ -2.29
SWI4YER111C MET31Q03081 177 aa0.72□□□□□ -2.29
SWI4YER111C ATG41Q12048 136 aa0.72□□□□□ -2.29
SWI4YER111C YDL157CQ12082 118 aa0.72□□□□□ -2.29
SWI4YER111C YOR015WQ12169 119 aa0.72□□□□□ -2.29
SWI4YER111C RIB3Q99258 208 aa0.72□□□□□ -2.29
SWI4YER111C MDM35O60200 86 aa0.72□□□□□ -2.29
SWI4YER111C STF2P16965 84 aa0.72□□□□□ -2.29
SWI4YER111C RNH202Q05635 350 aa0.72□□□□□ -2.29
SWI4YER111C RRT7Q07829 113 aa0.72□□□□□ -2.29
SWI4YER111C CSI2Q08054 341 aa0.72□□□□□ -2.29
SWI4YER111C YGL041W-AP0C5N3 154 aa0.71□□□□□ -2.3
SWI4YER111C GPA2P10823 449 aa0.71□□□□□ -2.3
SWI4YER111C SEN2P16658 377 aa0.71□□□□□ -2.3
SWI4YER111C SRP21P32342 167 aa0.71□□□□□ -2.3
SWI4YER111C SPT14P32363 452 aa0.71□□□□□ -2.3
SWI4YER111C YJL218WP40892 196 aaKnown RBP0.71□□□□□ -2.3
SWI4YER111C GPI2P46961 280 aa0.71□□□□□ -2.3
SWI4YER111C YNR064CP53750 290 aa0.71□□□□□ -2.3
SWI4YER111C UPS1Q05776 175 aa0.71□□□□□ -2.3
SWI4YER111C NUM1Q00402 2748 aa0.71□□□□□ -2.3
SWI4YER111C YOL162WP0CF19 215 aa0.71□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms