RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W TTI2P47168 421 aa1.37□□□□□ -2.19
RPN9YDR427W PIR1Q03178 341 aa1.37□□□□□ -2.19
RPN9YDR427W DUR1,2P32528 1835 aaKnown RBP1.37□□□□□ -2.19
RPN9YDR427W ADE6P38972 1358 aaKnown RBP1.36□□□□□ -2.19
RPN9YDR427W RAD51P25454 400 aa1.36□□□□□ -2.19
RPN9YDR427W SRP14P38985 146 aa1.36□□□□□ -2.19
RPN9YDR427W NSE4P43124 402 aa1.36□□□□□ -2.19
RPN9YDR427W UPS1Q05776 175 aa1.36□□□□□ -2.19
RPN9YDR427W YPR127WQ06494 345 aa1.36□□□□□ -2.19
RPN9YDR427W PEX11Q12462 236 aa1.36□□□□□ -2.19
RPN9YDR427W YOR381W-AQ3E804 55 aa1.36□□□□□ -2.19
RPN9YDR427W RPL35AP0CX84 120 aaKnown RBP1.35□□□□□ -2.19
RPN9YDR427W RPL35BP0CX85 120 aaKnown RBP1.35□□□□□ -2.19
RPN9YDR427W SEN2P16658 377 aa1.35□□□□□ -2.19
RPN9YDR427W HSP30P25619 332 aa1.35□□□□□ -2.19
RPN9YDR427W RPL37AP49166 88 aaKnown RBP1.35□□□□□ -2.19
RPN9YDR427W YGL235WP53071 178 aa1.35□□□□□ -2.19
RPN9YDR427W DML1Q03652 475 aa1.35□□□□□ -2.19
RPN9YDR427W YHP1Q04116 353 aa1.35□□□□□ -2.19
RPN9YDR427W YLR050CQ12155 161 aaKnown RBP1.35□□□□□ -2.19
RPN9YDR427W YOR214CQ12282 236 aa1.35□□□□□ -2.19
RPN9YDR427W SLH1P53327 1967 aaKnown RBP1.35□□□□□ -2.19
RPN9YDR427W HKR1P41809 1802 aa1.35□□□□□ -2.19
RPN9YDR427W STF2P16965 84 aa1.34□□□□□ -2.19
RPN9YDR427W YNL140CP53910 189 aa1.34□□□□□ -2.19
RPN9YDR427W VPS28Q02767 242 aa1.34□□□□□ -2.19
RPN9YDR427W MET31Q03081 177 aa1.34□□□□□ -2.19
RPN9YDR427W YMR007WQ03675 126 aa1.34□□□□□ -2.19
RPN9YDR427W YDR391CQ04170 232 aa1.34□□□□□ -2.19
RPN9YDR427W TAR1Q8TGM6 124 aa1.34□□□□□ -2.19
RPN9YDR427W FIG2P25653 1609 aa1.33□□□□□ -2.2
RPN9YDR427W FAS2P19097 1887 aaKnown RBP1.33□□□□□ -2.2
RPN9YDR427W MAK31P23059 88 aa1.33□□□□□ -2.2
RPN9YDR427W YBL010CP32788 280 aa1.33□□□□□ -2.2
RPN9YDR427W XPT1P47165 209 aa1.33□□□□□ -2.2
RPN9YDR427W YKR005CQ02203 525 aa1.33□□□□□ -2.2
RPN9YDR427W GRX5Q02784 150 aa1.33□□□□□ -2.2
RPN9YDR427W RIM9Q04734 239 aa1.33□□□□□ -2.2
RPN9YDR427W ATG41Q12048 136 aa1.33□□□□□ -2.2
RPN9YDR427W GSC2P40989 1895 aa1.33□□□□□ -2.2
RPN9YDR427W YRA2P36036 203 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
RPN9YDR427W ETR1P38071 380 aa1.32□□□□□ -2.2
RPN9YDR427W CSH1P38287 376 aa1.32□□□□□ -2.2
RPN9YDR427W YBR242WP38331 238 aa1.32□□□□□ -2.2
RPN9YDR427W GIM5Q04493 163 aa1.32□□□□□ -2.2
RPN9YDR427W ELP6Q04868 273 aa1.32□□□□□ -2.2
RPN9YDR427W SAC3P46674 1301 aa1.32□□□□□ -2.2
RPN9YDR427W RSF2P46974 1380 aa1.32□□□□□ -2.2
RPN9YDR427W UBC8P28263 218 aa1.31□□□□□ -2.2
RPN9YDR427W MRPL15P36523 253 aa1.31□□□□□ -2.2
RPN9YDR427W CCS1P40202 249 aaKnown RBP1.31□□□□□ -2.2
RPN9YDR427W TIM13P53299 105 aa1.31□□□□□ -2.2
RPN9YDR427W HSK3P69852 69 aa1.31□□□□□ -2.2
RPN9YDR427W PLP1Q04004 230 aa1.31□□□□□ -2.2
RPN9YDR427W YMR030W-AQ3E760 96 aa1.31□□□□□ -2.2
RPN9YDR427W HUA1P40325 198 aa1.3□□□□□ -2.2
RPN9YDR427W YPR203WQ08994 102 aa1.3□□□□□ -2.2
RPN9YDR427W RAD6P06104 172 aa1.29□□□□□ -2.2
RPN9YDR427W NUF2P33895 451 aa1.29□□□□□ -2.2
RPN9YDR427W YEL073CP39974 107 aa1.29□□□□□ -2.2
RPN9YDR427W PAC10P48363 199 aa1.29□□□□□ -2.2
RPN9YDR427W THI74Q04083 370 aa1.29□□□□□ -2.2
RPN9YDR427W RPO41P13433 1351 aaKnown RBP1.29□□□□□ -2.2
RPN9YDR427W CMD1P06787 147 aaKnown RBP1.28□□□□□ -2.2
RPN9YDR427W GLR1P41921 483 aaKnown RBP1.28□□□□□ -2.2
RPN9YDR427W FLO1P32768 1537 aa1.28□□□□□ -2.2
RPN9YDR427W ROM2P51862 1356 aaKnown RBP1.27□□□□□ -2.21
RPN9YDR427W YER188C-AP0C0V2 99 aa1.27□□□□□ -2.21
RPN9YDR427W VPS51P36116 164 aa1.27□□□□□ -2.21
RPN9YDR427W YER121WP40076 114 aa1.27□□□□□ -2.21
RPN9YDR427W SBH2P52871 88 aa1.27□□□□□ -2.21
RPN9YDR427W AHT1P29589 182 aa1.26□□□□□ -2.21
RPN9YDR427W YHL037CP38733 133 aa1.26□□□□□ -2.21
RPN9YDR427W YEL028WP39989 153 aa1.26□□□□□ -2.21
RPN9YDR427W NQM1P53228 333 aaPredicted RBP1.26□□□□□ -2.21
RPN9YDR427W SYM1Q06563 197 aa1.26□□□□□ -2.21
RPN9YDR427W LCL2Q08045 131 aa1.26□□□□□ -2.21
RPN9YDR427W MYO1P08964 1928 aa1.26□□□□□ -2.21
RPN9YDR427W MOB1P40484 314 aa1.25□□□□□ -2.21
RPN9YDR427W CMC2Q3E7A4 109 aa1.25□□□□□ -2.21
RPN9YDR427W LYS2P07702 1392 aa1.24□□□□□ -2.21
RPN9YDR427W HHT1P61830 136 aa1.24□□□□□ -2.21
RPN9YDR427W FIT1Q04433 528 aa1.24□□□□□ -2.21
RPN9YDR427W ECM29P38737 1868 aa1.24□□□□□ -2.21
RPN9YDR427W YGL101WP53144 215 aa1.23□□□□□ -2.21
RPN9YDR427W TMA20P89886 181 aaPredicted RBP1.23□□□□□ -2.21
RPN9YDR427W YML079WQ03629 201 aa1.23□□□□□ -2.21
RPN9YDR427W AVO2Q04749 426 aa1.23□□□□□ -2.21
RPN9YDR427W RDI1Q12434 202 aa1.23□□□□□ -2.21
RPN9YDR427W MOT1P32333 1867 aa1.22□□□□□ -2.21
RPN9YDR427W SPS2P08459 502 aa1.22□□□□□ -2.21
RPN9YDR427W YGR269WP40326 108 aa1.22□□□□□ -2.21
RPN9YDR427W YFL051CP43552 160 aa1.22□□□□□ -2.21
RPN9YDR427W RPL37BP51402 88 aaKnown RBP1.22□□□□□ -2.21
RPN9YDR427W LIP1Q03579 150 aa1.22□□□□□ -2.21
RPN9YDR427W YLR053CQ12026 108 aa1.22□□□□□ -2.21
RPN9YDR427W PTC1P35182 281 aa1.21□□□□□ -2.22
RPN9YDR427W SHB17P36136 271 aaKnown RBP1.21□□□□□ -2.22
RPN9YDR427W FES1P38260 290 aa1.21□□□□□ -2.22
RPN9YDR427W ATG10Q07879 167 aa1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 118.7 ms