RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W DYN3Q04949 312 aa1.46□□□□□ -2.18
SSF2YDR312W IRC19Q07843 230 aa1.46□□□□□ -2.18
SSF2YDR312W YHR212W-AP0CX91 67 aa1.45□□□□□ -2.18
SSF2YDR312W GCY1P14065 312 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
SSF2YDR312W SPS18P32572 300 aa1.45□□□□□ -2.18
SSF2YDR312W FZF1P32805 299 aa1.45□□□□□ -2.18
SSF2YDR312W CAF4P36130 643 aa1.45□□□□□ -2.18
SSF2YDR312W ECM4P36156 370 aa1.45□□□□□ -2.18
SSF2YDR312W SHG1P38337 142 aa1.45□□□□□ -2.18
SSF2YDR312W GAT4P40569 121 aa1.45□□□□□ -2.18
SSF2YDR312W SKI6P46948 246 aaPredicted RBP1.45□□□□□ -2.18
SSF2YDR312W PAC10P48363 199 aa1.45□□□□□ -2.18
SSF2YDR312W PET191Q02772 108 aa1.45□□□□□ -2.18
SSF2YDR312W YDR102CQ03864 110 aa1.45□□□□□ -2.18
SSF2YDR312W YMR315WQ04869 349 aaKnown RBP1.45□□□□□ -2.18
SSF2YDR312W SML1Q04964 104 aa1.45□□□□□ -2.18
SSF2YDR312W ANT1Q06497 328 aa1.45□□□□□ -2.18
SSF2YDR312W BRX1Q08235 291 aaKnown RBP1.45□□□□□ -2.18
SSF2YDR312W YOR343CQ12484 108 aa1.45□□□□□ -2.18
SSF2YDR312W ODC2Q99297 307 aa1.45□□□□□ -2.18
SSF2YDR312W SIR2P06700 562 aa1.44□□□□□ -2.18
SSF2YDR312W SNF4P12904 322 aa1.44□□□□□ -2.18
SSF2YDR312W SUA7P29055 345 aaPredicted RBP1.44□□□□□ -2.18
SSF2YDR312W ETR1P38071 380 aa1.44□□□□□ -2.18
SSF2YDR312W GLE2P40066 365 aa1.44□□□□□ -2.18
SSF2YDR312W PDS1P40316 373 aaPredicted RBP1.44□□□□□ -2.18
SSF2YDR312W TMA22P47089 198 aaPredicted RBP1.44□□□□□ -2.18
SSF2YDR312W NOP19P53317 196 aaPredicted RBP1.44□□□□□ -2.18
SSF2YDR312W NUP49Q02199 472 aa1.44□□□□□ -2.18
SSF2YDR312W MBF1O14467 151 aaKnown RBP1.43□□□□□ -2.18
SSF2YDR312W MRS1P07266 363 aa1.43□□□□□ -2.18
SSF2YDR312W HSP30P25619 332 aa1.43□□□□□ -2.18
SSF2YDR312W FLX1P40464 311 aa1.43□□□□□ -2.18
SSF2YDR312W AIM25P47140 327 aa1.43□□□□□ -2.18
SSF2YDR312W YDR476CQ03362 224 aa1.43□□□□□ -2.18
SSF2YDR312W CUE4Q04201 117 aaPredicted RBP1.43□□□□□ -2.18
SSF2YDR312W ATG38Q05789 226 aaKnown RBP1.43□□□□□ -2.18
SSF2YDR312W YOR214CQ12282 236 aa1.43□□□□□ -2.18
SSF2YDR312W NMT1P14743 455 aa1.42□□□□□ -2.18
SSF2YDR312W ATP15P21306 62 aa1.42□□□□□ -2.18
SSF2YDR312W YGL010WP25338 174 aa1.42□□□□□ -2.18
SSF2YDR312W BUB2P26448 306 aaPredicted RBP1.42□□□□□ -2.18
SSF2YDR312W ATP7P30902 174 aa1.42□□□□□ -2.18
SSF2YDR312W OCH1P31755 480 aa1.42□□□□□ -2.18
SSF2YDR312W POP3P53833 195 aaPredicted RBP1.42□□□□□ -2.18
SSF2YDR312W RPL22BP56628 122 aaKnown RBP1.42□□□□□ -2.18
SSF2YDR312W YDR391CQ04170 232 aa1.42□□□□□ -2.18
SSF2YDR312W YMR105W-AQ8TGS8 64 aa1.42□□□□□ -2.18
SSF2YDR312W YFR032C-BQ8TGU2 87 aa1.42□□□□□ -2.18
SSF2YDR312W YJL197C-AP0C5P0 93 aa1.41□□□□□ -2.18
SSF2YDR312W PTC1P35182 281 aa1.41□□□□□ -2.18
SSF2YDR312W YER134CP40081 178 aa1.41□□□□□ -2.18
SSF2YDR312W RPL13BP40212 199 aaKnown RBP1.41□□□□□ -2.18
SSF2YDR312W ERJ5P43613 295 aaPredicted RBP1.41□□□□□ -2.18
SSF2YDR312W TDA4P47153 279 aa1.41□□□□□ -2.18
SSF2YDR312W YNL184CP53876 108 aa1.41□□□□□ -2.18
SSF2YDR312W YDR274CP87283 123 aa1.41□□□□□ -2.18
SSF2YDR312W YOL131WQ08270 108 aa1.41□□□□□ -2.18
SSF2YDR312W RPL13AQ12690 199 aaPredicted RBP1.41□□□□□ -2.18
SSF2YDR312W YLR236CA0A023PZG4 107 aa1.4□□□□□ -2.19
SSF2YDR312W COX5BP00425 151 aa1.4□□□□□ -2.19
SSF2YDR312W YOL162WP0CF19 215 aa1.4□□□□□ -2.19
SSF2YDR312W TIM12P32830 109 aa1.4□□□□□ -2.19
SSF2YDR312W EGD2P38879 174 aaKnown RBP1.4□□□□□ -2.19
SSF2YDR312W YEA4P40004 342 aa1.4□□□□□ -2.19
SSF2YDR312W CCC1P47818 322 aa1.4□□□□□ -2.19
SSF2YDR312W YDC1Q02896 317 aa1.4□□□□□ -2.19
SSF2YDR312W YOL160WQ08321 113 aa1.4□□□□□ -2.19
SSF2YDR312W YPR014CQ6B0W2 109 aa1.4□□□□□ -2.19
SSF2YDR312W LHP1P33399 275 aaKnown RBP1.39□□□□□ -2.19
SSF2YDR312W UPS2P35200 230 aa1.39□□□□□ -2.19
SSF2YDR312W PAN3P36102 679 aaPredicted RBP1.39□□□□□ -2.19
SSF2YDR312W YBR219CP38317 127 aa1.39□□□□□ -2.19
SSF2YDR312W SER2P42941 309 aa1.39□□□□□ -2.19
SSF2YDR312W YFR035CP43608 114 aa1.39□□□□□ -2.19
SSF2YDR312W ARP3P47117 449 aaKnown RBP1.39□□□□□ -2.19
SSF2YDR312W KNH1P50112 268 aa1.39□□□□□ -2.19
SSF2YDR312W SOL1P50278 321 aa1.39□□□□□ -2.19
SSF2YDR312W UBC12P52491 188 aa1.39□□□□□ -2.19
SSF2YDR312W GRX5Q02784 150 aa1.39□□□□□ -2.19
SSF2YDR312W IGO2Q9P305 131 aa1.39□□□□□ -2.19
SSF2YDR312W YAR023CD6VPM8 179 aa1.38□□□□□ -2.19
SSF2YDR312W SEC11P15367 167 aa1.38□□□□□ -2.19
SSF2YDR312W PHO85P17157 305 aa1.38□□□□□ -2.19
SSF2YDR312W SEC72P39742 193 aaKnown RBP1.38□□□□□ -2.19
SSF2YDR312W ARO8P53090 500 aaKnown RBP1.38□□□□□ -2.19
SSF2YDR312W YNR077CP53758 84 aa1.38□□□□□ -2.19
SSF2YDR312W PGA1P53896 198 aa1.38□□□□□ -2.19
SSF2YDR312W YMR295CQ03559 197 aa1.38□□□□□ -2.19
SSF2YDR312W YLR162WQ06235 118 aa1.38□□□□□ -2.19
SSF2YDR312W YPR127WQ06494 345 aa1.38□□□□□ -2.19
SSF2YDR312W DGA1Q08650 418 aa1.38□□□□□ -2.19
SSF2YDR312W FCY1Q12178 158 aa1.38□□□□□ -2.19
SSF2YDR312W YLR412C-AQ3E742 68 aa1.38□□□□□ -2.19
SSF2YDR312W RPS1BP23248 255 aaKnown RBP1.37□□□□□ -2.19
SSF2YDR312W FMP23P38231 175 aa1.37□□□□□ -2.19
SSF2YDR312W MTW1P39731 289 aa1.37□□□□□ -2.19
SSF2YDR312W VPS55P47111 140 aa1.37□□□□□ -2.19
SSF2YDR312W YGL235WP53071 178 aa1.37□□□□□ -2.19
SSF2YDR312W JAC1P53193 184 aa1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms