RNA–Protein interactions for RNA: YBR097W

VPS15, Transcript of Serine/threonine protein kinase involved in vacuolar protein sorting, yeastyeast

Gene VPS15, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS15YBR097W YGL262WP53054 175 aa1.45□□□□□ -2.18
VPS15YBR097W UPS3Q04006 179 aa1.45□□□□□ -2.18
VPS15YBR097W YHC1Q05900 231 aaKnown RBP1.45□□□□□ -2.18
VPS15YBR097W YPS3Q12303 508 aa1.45□□□□□ -2.18
VPS15YBR097W YLR361C-AQ3E795 98 aa1.45□□□□□ -2.18
VPS15YBR097W RPS22BQ3E7Y3 130 aaKnown RBP1.45□□□□□ -2.18
VPS15YBR097W YCL021W-AQ96VH3 125 aa1.45□□□□□ -2.18
VPS15YBR097W PSK1P31374 1356 aa1.45□□□□□ -2.18
VPS15YBR097W TSC11P40061 1430 aa1.45□□□□□ -2.18
VPS15YBR097W YOL162WP0CF19 215 aa1.45□□□□□ -2.18
VPS15YBR097W RPL18AP0CX49 186 aaKnown RBP1.45□□□□□ -2.18
VPS15YBR097W RPL18BP0CX50 186 aaKnown RBP1.45□□□□□ -2.18
VPS15YBR097W PEX4P29340 183 aa1.45□□□□□ -2.18
VPS15YBR097W MSN2P33748 704 aa1.45□□□□□ -2.18
VPS15YBR097W SIP2P34164 415 aaKnown RBP1.45□□□□□ -2.18
VPS15YBR097W MRPL37P36532 105 aa1.45□□□□□ -2.18
VPS15YBR097W YHR138CP38841 114 aaPredicted RBP1.45□□□□□ -2.18
VPS15YBR097W SCS3P53012 380 aa1.45□□□□□ -2.18
VPS15YBR097W BUD25P85052 153 aa1.45□□□□□ -2.18
VPS15YBR097W GAS5Q08193 484 aa1.45□□□□□ -2.18
VPS15YBR097W ATG41Q12048 136 aa1.45□□□□□ -2.18
VPS15YBR097W RPL40AP0CH08 128 aaKnown RBP1.45□□□□□ -2.18
VPS15YBR097W RPL40BP0CH09 128 aaKnown RBP1.45□□□□□ -2.18
VPS15YBR097W BGL2P15703 313 aaKnown RBP1.45□□□□□ -2.18
VPS15YBR097W YCR099CP25657 155 aa1.45□□□□□ -2.18
VPS15YBR097W YJL028WP47062 111 aa1.45□□□□□ -2.18
VPS15YBR097W EMC4P53073 190 aa1.45□□□□□ -2.18
VPS15YBR097W SCW4P53334 386 aaKnown RBP1.45□□□□□ -2.18
VPS15YBR097W SGF11Q03067 99 aa1.45□□□□□ -2.18
VPS15YBR097W YLR296WQ05898 108 aa1.45□□□□□ -2.18
VPS15YBR097W HEM25Q07534 307 aa1.45□□□□□ -2.18
VPS15YBR097W YOL159CQ08300 171 aa1.45□□□□□ -2.18
VPS15YBR097W HUB1Q6Q546 73 aa1.45□□□□□ -2.18
VPS15YBR097W RPS23AP0CX29 145 aaKnown RBP1.45□□□□□ -2.18
VPS15YBR097W RPS23BP0CX30 145 aa1.45□□□□□ -2.18
VPS15YBR097W KRE1P17260 313 aa1.45□□□□□ -2.18
VPS15YBR097W MIG1P27705 504 aa1.45□□□□□ -2.18
VPS15YBR097W IES6P32617 166 aa1.45□□□□□ -2.18
VPS15YBR097W SAP30P38429 201 aa1.45□□□□□ -2.18
VPS15YBR097W YAR029WP39549 74 aa1.45□□□□□ -2.18
VPS15YBR097W CUP9P41817 306 aa1.45□□□□□ -2.18
VPS15YBR097W YGL118CP53132 145 aa1.45□□□□□ -2.18
VPS15YBR097W AIM34Q03673 198 aa1.45□□□□□ -2.18
VPS15YBR097W FMN1Q03778 218 aa1.45□□□□□ -2.18
VPS15YBR097W YDL057WQ07379 328 aa1.45□□□□□ -2.18
VPS15YBR097W YDL211CQ12121 372 aa1.45□□□□□ -2.18
VPS15YBR097W YLR419WQ06698 1435 aaKnown RBP1.44□□□□□ -2.18
VPS15YBR097W COX9P07255 59 aa1.44□□□□□ -2.18
VPS15YBR097W RPS22AP0C0W1 130 aaKnown RBP1.44□□□□□ -2.18
VPS15YBR097W CPR3P25719 182 aa1.44□□□□□ -2.18
VPS15YBR097W YOR062CP36025 268 aa1.44□□□□□ -2.18
VPS15YBR097W FRM2P37261 193 aa1.44□□□□□ -2.18
VPS15YBR097W XBP1P40489 647 aa1.44□□□□□ -2.18
VPS15YBR097W YFR020WP43600 232 aa1.44□□□□□ -2.18
VPS15YBR097W YJR111CP47148 283 aaKnown RBP1.44□□□□□ -2.18
VPS15YBR097W SNO1Q03144 224 aa1.44□□□□□ -2.18
VPS15YBR097W ECM7Q06200 448 aa1.44□□□□□ -2.18
VPS15YBR097W ARR2Q06597 130 aa1.44□□□□□ -2.18
VPS15YBR097W TEN1Q07921 160 aa1.44□□□□□ -2.18
VPS15YBR097W PFA4Q12006 378 aa1.44□□□□□ -2.18
VPS15YBR097W MSL5Q12186 476 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
VPS15YBR097W LYS2P07702 1392 aa1.44□□□□□ -2.18
VPS15YBR097W RPB10P22139 70 aa1.44□□□□□ -2.18
VPS15YBR097W LDB7P38210 180 aa1.44□□□□□ -2.18
VPS15YBR097W YNL320WP42840 284 aa1.44□□□□□ -2.18
VPS15YBR097W TPC1P53257 314 aa1.44□□□□□ -2.18
VPS15YBR097W TIM10P87108 93 aa1.44□□□□□ -2.18
VPS15YBR097W DFG5Q05031 458 aa1.44□□□□□ -2.18
VPS15YBR097W PIN3Q06449 215 aa1.44□□□□□ -2.18
VPS15YBR097W PIB1Q06651 286 aa1.44□□□□□ -2.18
VPS15YBR097W PAU23Q07987 124 aa1.44□□□□□ -2.18
VPS15YBR097W YOL029CQ08187 201 aa1.44□□□□□ -2.18
VPS15YBR097W FIT3Q08907 204 aa1.44□□□□□ -2.18
VPS15YBR097W PAU17Q12370 124 aa1.44□□□□□ -2.18
VPS15YBR097W DFM1Q12743 341 aaKnown RBP1.44□□□□□ -2.18
VPS15YBR097W YAL063C-AQ3E791 96 aa1.44□□□□□ -2.18
VPS15YBR097W YHR213W-AQ8TGT4 77 aa1.44□□□□□ -2.18
VPS15YBR097W POR1P04840 283 aaKnown RBP1.44□□□□□ -2.18
VPS15YBR097W CDC36P06100 191 aaPredicted RBP1.44□□□□□ -2.18
VPS15YBR097W BUD23P25627 275 aaPredicted RBP1.44□□□□□ -2.18
VPS15YBR097W YKL162CP36052 402 aa1.44□□□□□ -2.18
VPS15YBR097W YBR062CP38239 180 aa1.44□□□□□ -2.18
VPS15YBR097W YBR096WP38256 230 aa1.44□□□□□ -2.18
VPS15YBR097W PAU7P39545 55 aa1.44□□□□□ -2.18
VPS15YBR097W EDC2P40023 145 aaPredicted RBP1.44□□□□□ -2.18
VPS15YBR097W HYR1P40581 163 aaKnown RBP1.44□□□□□ -2.18
VPS15YBR097W EGT2P42835 1041 aa1.44□□□□□ -2.18
VPS15YBR097W FMP45Q07651 309 aa1.44□□□□□ -2.18
VPS15YBR097W DAT1P13483 248 aaKnown RBP1.43□□□□□ -2.18
VPS15YBR097W MRPL20P22354 195 aaPredicted RBP1.43□□□□□ -2.18
VPS15YBR097W SHU1P38751 150 aa1.43□□□□□ -2.18
VPS15YBR097W FKH2P41813 862 aa1.43□□□□□ -2.18
VPS15YBR097W SIP18P50263 79 aa1.43□□□□□ -2.18
VPS15YBR097W CRR1Q05790 422 aa1.43□□□□□ -2.18
VPS15YBR097W ARC18Q05933 178 aaKnown RBP1.43□□□□□ -2.18
VPS15YBR097W VPS68Q12016 184 aa1.43□□□□□ -2.18
VPS15YBR097W YGL041C-BQ3E750 60 aa1.43□□□□□ -2.18
VPS15YBR097W YNL277W-AQ3E7Z0 62 aa1.43□□□□□ -2.18
VPS15YBR097W YMR316C-AI2HB70 103 aa1.43□□□□□ -2.18
VPS15YBR097W FUN19P28003 413 aaPredicted RBP1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms