RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	TRS20	P38334	175 aa		4.23	□□□□□ -1.73
ROX3	YBL093C	PET100	P38958	111 aa		4.23	□□□□□ -1.73
ROX3	YBL093C	PAU15	P40585	124 aa		4.23	□□□□□ -1.73
ROX3	YBL093C	NSE4	P43124	402 aa		4.23	□□□□□ -1.73
ROX3	YBL093C	HAM1	P47119	197 aa	Known RBP	4.23	□□□□□ -1.73
ROX3	YBL093C	CDC7	P06243	507 aa		4.22	□□□□□ -1.73
ROX3	YBL093C	YFL068W	P0CX99	160 aa		4.22	□□□□□ -1.73
ROX3	YBL093C	YLL066W-A	P0CY00	160 aa		4.22	□□□□□ -1.73
ROX3	YBL093C	YLL067W-A	P0CY01	160 aa		4.22	□□□□□ -1.73
ROX3	YBL093C	RNA15	P25299	296 aa	Predicted RBP	4.22	□□□□□ -1.73
ROX3	YBL093C	SUA7	P29055	345 aa	Predicted RBP	4.22	□□□□□ -1.73
ROX3	YBL093C	AVT5	P38176	459 aa		4.22	□□□□□ -1.73
ROX3	YBL093C	DOG2	P38773	246 aa		4.22	□□□□□ -1.73
ROX3	YBL093C	DOG1	P38774	246 aa		4.22	□□□□□ -1.73
ROX3	YBL093C	ATG27	P46989	271 aa		4.22	□□□□□ -1.73
ROX3	YBL093C	HST4	P53688	370 aa		4.22	□□□□□ -1.73
ROX3	YBL093C	LOA1	Q06508	300 aa		4.22	□□□□□ -1.73
ROX3	YBL093C	PBP4	Q07362	185 aa	Known RBP	4.22	□□□□□ -1.73
ROX3	YBL093C	LDS2	Q08218	356 aa		4.22	□□□□□ -1.73
ROX3	YBL093C	ATP16	Q12165	160 aa		4.22	□□□□□ -1.73
ROX3	YBL093C	PET494	P07390	489 aa	Predicted RBP	4.21	□□□□□ -1.74
ROX3	YBL093C	RPB3	P16370	318 aa	Known RBP	4.21	□□□□□ -1.74
ROX3	YBL093C	POF1	P25576	258 aa		4.21	□□□□□ -1.74
ROX3	YBL093C	YPS1	P32329	569 aa		4.21	□□□□□ -1.74
ROX3	YBL093C	MRPL38	P35996	138 aa	Predicted RBP	4.21	□□□□□ -1.74
ROX3	YBL093C	MIA40	P36046	403 aa		4.21	□□□□□ -1.74
ROX3	YBL093C	SFT2	P38166	215 aa		4.21	□□□□□ -1.74
ROX3	YBL093C	YBR013C	P38215	129 aa		4.21	□□□□□ -1.74
ROX3	YBL093C	GTT1	P40582	234 aa		4.21	□□□□□ -1.74
ROX3	YBL093C	GPI2	P46961	280 aa		4.21	□□□□□ -1.74
ROX3	YBL093C	MGA1	P53050	456 aa		4.21	□□□□□ -1.74
ROX3	YBL093C	YGR026W	P53217	278 aa		4.21	□□□□□ -1.74
ROX3	YBL093C	OCA2	P53949	197 aa		4.21	□□□□□ -1.74
ROX3	YBL093C	ZEO1	Q08245	113 aa		4.21	□□□□□ -1.74
ROX3	YBL093C	IRC23	Q08416	157 aa		4.21	□□□□□ -1.74
ROX3	YBL093C	AYT1	Q12226	474 aa		4.21	□□□□□ -1.74
ROX3	YBL093C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
ROX3	YBL093C	YHR213W	P0CI67	198 aa		4.2	□□□□□ -1.74
ROX3	YBL093C	RPS2	P25443	254 aa	Known RBP	4.2	□□□□□ -1.74
ROX3	YBL093C	HMX1	P32339	317 aa		4.2	□□□□□ -1.74
ROX3	YBL093C	SRP21	P32342	167 aa		4.2	□□□□□ -1.74
ROX3	YBL093C	RRT1	P38192	103 aa		4.2	□□□□□ -1.74
ROX3	YBL093C	LSM2	P38203	95 aa	Known RBP	4.2	□□□□□ -1.74
ROX3	YBL093C	ICS2	P38284	255 aa		4.2	□□□□□ -1.74
ROX3	YBL093C	GLE2	P40066	365 aa		4.2	□□□□□ -1.74
ROX3	YBL093C	CYB5	P40312	120 aa		4.2	□□□□□ -1.74
ROX3	YBL093C	IMP2	P46972	177 aa		4.2	□□□□□ -1.74
ROX3	YBL093C	YJL027C	P47063	138 aa	Predicted RBP	4.2	□□□□□ -1.74
ROX3	YBL093C	MOG1	P47123	218 aa		4.2	□□□□□ -1.74
ROX3	YBL093C	YGR219W	P53307	113 aa		4.2	□□□□□ -1.74
ROX3	YBL093C	SWT21	P53873	357 aa	Predicted RBP	4.2	□□□□□ -1.74
ROX3	YBL093C	YLR281C	Q05863	155 aa		4.2	□□□□□ -1.74
ROX3	YBL093C	FIT2	Q08906	153 aa		4.2	□□□□□ -1.74
ROX3	YBL093C	YOP1	Q12402	180 aa		4.2	□□□□□ -1.74
ROX3	YBL093C	NHP6A	P11632	93 aa	Known RBP	4.19	□□□□□ -1.74
ROX3	YBL093C	HSP12	P22943	109 aa	Known RBP	4.19	□□□□□ -1.74
ROX3	YBL093C	INO2	P26798	304 aa		4.19	□□□□□ -1.74
ROX3	YBL093C	RPB9	P27999	122 aa		4.19	□□□□□ -1.74
ROX3	YBL093C	PHD1	P36093	366 aa		4.19	□□□□□ -1.74
ROX3	YBL093C	YHR173C	P38864	112 aa		4.19	□□□□□ -1.74
ROX3	YBL093C	HSP10	P38910	106 aa		4.19	□□□□□ -1.74
ROX3	YBL093C	SRP14	P38985	146 aa		4.19	□□□□□ -1.74
ROX3	YBL093C	YIL163C	P40448	117 aa		4.19	□□□□□ -1.74
ROX3	YBL093C	HIT1	P46973	164 aa		4.19	□□□□□ -1.74
ROX3	YBL093C	CPD1	P53314	239 aa		4.19	□□□□□ -1.74
ROX3	YBL093C	DAD3	P69850	94 aa		4.19	□□□□□ -1.74
ROX3	YBL093C	SDH7	Q04401	133 aa		4.19	□□□□□ -1.74
ROX3	YBL093C	FMP49	A0A023PZB3	126 aa		4.18	□□□□□ -1.74
ROX3	YBL093C	RPL15A	P05748	204 aa	Known RBP	4.18	□□□□□ -1.74
ROX3	YBL093C	CYC3	P06182	269 aa		4.18	□□□□□ -1.74
ROX3	YBL093C	DDI2	P0CH63	225 aa		4.18	□□□□□ -1.74
ROX3	YBL093C	DDI3	P0CH64	225 aa		4.18	□□□□□ -1.74
ROX3	YBL093C	PRS4	P38063	326 aa	Predicted RBP	4.18	□□□□□ -1.74
ROX3	YBL093C	FYV6	P53913	173 aa		4.18	□□□□□ -1.74
ROX3	YBL093C	MRX11	Q03079	207 aa		4.18	□□□□□ -1.74
ROX3	YBL093C	RAV2	Q03956	351 aa		4.18	□□□□□ -1.74
ROX3	YBL093C	SNU23	Q12368	194 aa	Predicted RBP	4.18	□□□□□ -1.74
ROX3	YBL093C	MRS1	P07266	363 aa		4.17	□□□□□ -1.74
ROX3	YBL093C	LSM4	P40070	187 aa	Known RBP	4.17	□□□□□ -1.74
ROX3	YBL093C	PAU5	P43575	122 aa		4.17	□□□□□ -1.74
ROX3	YBL093C	TOM7	P53507	60 aa		4.17	□□□□□ -1.74
ROX3	YBL093C	NAT3	Q06504	195 aa		4.17	□□□□□ -1.74
ROX3	YBL093C	TIM18	Q08749	192 aa		4.17	□□□□□ -1.74
ROX3	YBL093C	PAU19	P0CE85	124 aa		4.16	□□□□□ -1.74
ROX3	YBL093C	PAU21	P0CE86	164 aa		4.16	□□□□□ -1.74
ROX3	YBL093C	PAU22	P0CE87	164 aa		4.16	□□□□□ -1.74
ROX3	YBL093C	YCL042W	P25572	119 aa		4.16	□□□□□ -1.74
ROX3	YBL093C	PAU3	P25610	124 aa		4.16	□□□□□ -1.74
ROX3	YBL093C	YBR090C	P38253	122 aa		4.16	□□□□□ -1.74
ROX3	YBL093C	MIC12	P38341	106 aa		4.16	□□□□□ -1.74
ROX3	YBL093C	SNU13	P39990	126 aa	Known RBP	4.16	□□□□□ -1.74
ROX3	YBL093C	HUA1	P40325	198 aa		4.16	□□□□□ -1.74
ROX3	YBL093C	AIM24	P47127	394 aa		4.16	□□□□□ -1.74
ROX3	YBL093C	ATP19	P81451	68 aa		4.16	□□□□□ -1.74
ROX3	YBL093C	SPG4	Q04438	115 aa		4.16	□□□□□ -1.74
ROX3	YBL093C	DCN1	Q12395	269 aa		4.16	□□□□□ -1.74
ROX3	YBL093C	COX2	P00410	251 aa		4.15	□□□□□ -1.75
ROX3	YBL093C	TIR1	P10863	254 aa		4.15	□□□□□ -1.75
ROX3	YBL093C	QRI5	P32344	111 aa		4.15	□□□□□ -1.75
ROX3	YBL093C	TIR2	P33890	251 aa		4.15	□□□□□ -1.75

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