RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFA1	YAR007C	YIL012W	P40551	113 aa		4.58	□□□□□ -1.68
RFA1	YAR007C	YAR1	P46683	200 aa		4.58	□□□□□ -1.68
RFA1	YAR007C	BET5	Q03630	159 aa		4.58	□□□□□ -1.68
RFA1	YAR007C	YHP1	Q04116	353 aa		4.58	□□□□□ -1.68
RFA1	YAR007C	YDR391C	Q04170	232 aa		4.58	□□□□□ -1.68
RFA1	YAR007C	API2	Q04413	109 aa		4.58	□□□□□ -1.68
RFA1	YAR007C	RAV2	Q03956	351 aa		4.58	□□□□□ -1.68
RFA1	YAR007C	YMR254C	Q04838	102 aa		4.58	□□□□□ -1.68
RFA1	YAR007C	YPR098C	Q06089	161 aa		4.58	□□□□□ -1.68
RFA1	YAR007C	SNA4	Q07549	140 aa		4.58	□□□□□ -1.68
RFA1	YAR007C	BOL1	Q3E793	110 aa		4.58	□□□□□ -1.68
RFA1	YAR007C	ACC1	Q00955	2233 aa	Known RBP	4.57	□□□□□ -1.68
RFA1	YAR007C	RPS16A	P0CX51	143 aa	Known RBP	4.57	□□□□□ -1.68
RFA1	YAR007C	RPS16B	P0CX52	143 aa	Known RBP	4.57	□□□□□ -1.68
RFA1	YAR007C	RPL12A	P0CX53	165 aa	Known RBP	4.57	□□□□□ -1.68
RFA1	YAR007C	RPL12B	P0CX54	165 aa		4.57	□□□□□ -1.68
RFA1	YAR007C	DAL80	P26343	269 aa		4.57	□□□□□ -1.68
RFA1	YAR007C	YHR138C	P38841	114 aa	Predicted RBP	4.57	□□□□□ -1.68
RFA1	YAR007C	CRZ1	P53968	678 aa		4.57	□□□□□ -1.68
RFA1	YAR007C	ATP19	P81451	68 aa		4.57	□□□□□ -1.68
RFA1	YAR007C	HNT3	Q08702	217 aa		4.57	□□□□□ -1.68
RFA1	YAR007C	PIN2	Q12057	282 aa		4.57	□□□□□ -1.68
RFA1	YAR007C	YPS3	Q12303	508 aa		4.57	□□□□□ -1.68
RFA1	YAR007C	ROX3	P25046	220 aa		4.56	□□□□□ -1.68
RFA1	YAR007C	FZF1	P32805	299 aa		4.56	□□□□□ -1.68
RFA1	YAR007C	ECM14	P38836	430 aa		4.56	□□□□□ -1.68
RFA1	YAR007C	YJL163C	P46996	555 aa		4.56	□□□□□ -1.68
RFA1	YAR007C	ELC1	Q03071	99 aa		4.56	□□□□□ -1.68
RFA1	YAR007C	AYT1	Q12226	474 aa		4.56	□□□□□ -1.68
RFA1	YAR007C	REC104	P33323	182 aa		4.56	□□□□□ -1.68
RFA1	YAR007C	PRS4	P38063	326 aa	Predicted RBP	4.56	□□□□□ -1.68
RFA1	YAR007C	DOG2	P38773	246 aa		4.56	□□□□□ -1.68
RFA1	YAR007C	YHR173C	P38864	112 aa		4.56	□□□□□ -1.68
RFA1	YAR007C	TIF34	P40217	347 aa	Known RBP	4.56	□□□□□ -1.68
RFA1	YAR007C	CIS3	P47001	227 aa		4.56	□□□□□ -1.68
RFA1	YAR007C	PCP1	P53259	346 aa		4.56	□□□□□ -1.68
RFA1	YAR007C	SNP1	Q00916	300 aa	Predicted RBP	4.56	□□□□□ -1.68
RFA1	YAR007C	FAS1	P07149	2051 aa	Known RBP	4.55	□□□□□ -1.68
RFA1	YAR007C	RPS14A	P06367	137 aa	Known RBP	4.55	□□□□□ -1.68
RFA1	YAR007C	SFT2	P38166	215 aa		4.55	□□□□□ -1.68
RFA1	YAR007C	RPS14B	P39516	138 aa	Known RBP	4.55	□□□□□ -1.68
RFA1	YAR007C	YIL029C	P40538	142 aa		4.55	□□□□□ -1.68
RFA1	YAR007C	LCL3	P53153	274 aa		4.55	□□□□□ -1.68
RFA1	YAR007C	TOM7	P53507	60 aa		4.55	□□□□□ -1.68
RFA1	YAR007C	YMR210W	Q03649	449 aa		4.55	□□□□□ -1.68
RFA1	YAR007C	TIM18	Q08749	192 aa		4.55	□□□□□ -1.68
RFA1	YAR007C	PRM3	Q08931	133 aa		4.55	□□□□□ -1.68
RFA1	YAR007C	YCR075W-A	Q3E830	75 aa		4.55	□□□□□ -1.68
RFA1	YAR007C	POL2	P21951	2222 aa	Known RBP	4.54	□□□□□ -1.68
RFA1	YAR007C	HSP12	P22943	109 aa	Known RBP	4.54	□□□□□ -1.68
RFA1	YAR007C	YPI1	P43587	155 aa		4.54	□□□□□ -1.68
RFA1	YAR007C	YJR096W	P47137	282 aa		4.54	□□□□□ -1.68
RFA1	YAR007C	UBC13	P52490	153 aa		4.54	□□□□□ -1.68
RFA1	YAR007C	YLR122C	Q12312	125 aa		4.54	□□□□□ -1.68
RFA1	YAR007C	YGL258W-A	Q3E740	77 aa		4.54	□□□□□ -1.68
RFA1	YAR007C	INO4	P13902	151 aa		4.54	□□□□□ -1.68
RFA1	YAR007C	MRPL31	P14063	131 aa	Predicted RBP	4.54	□□□□□ -1.68
RFA1	YAR007C	TOM40	P23644	387 aa	Known RBP	4.54	□□□□□ -1.68
RFA1	YAR007C	YKR073C	P36153	106 aa		4.54	□□□□□ -1.68
RFA1	YAR007C	YPT10	P38146	199 aa		4.54	□□□□□ -1.68
RFA1	YAR007C	OST1	P41543	476 aa	Known RBP	4.54	□□□□□ -1.68
RFA1	YAR007C	GZF3	P42944	551 aa	Known RBP	4.54	□□□□□ -1.68
RFA1	YAR007C	YFR045W	P43617	309 aa		4.54	□□□□□ -1.68
RFA1	YAR007C	UPS1	Q05776	175 aa		4.54	□□□□□ -1.68
RFA1	YAR007C	IRC25	Q07951	179 aa		4.54	□□□□□ -1.68
RFA1	YAR007C	FIT2	Q08906	153 aa		4.54	□□□□□ -1.68
RFA1	YAR007C	VPS63	O13549	108 aa		4.53	□□□□□ -1.68
RFA1	YAR007C	RPL7A	P05737	244 aa	Known RBP	4.53	□□□□□ -1.68
RFA1	YAR007C	YGP1	P38616	354 aa	Known RBP	4.53	□□□□□ -1.68
RFA1	YAR007C	SNF11	P38956	169 aa		4.53	□□□□□ -1.68
RFA1	YAR007C	YIL086C	P40503	102 aa		4.53	□□□□□ -1.68
RFA1	YAR007C	REE1	P40893	198 aa		4.53	□□□□□ -1.68
RFA1	YAR007C	HSK3	P69852	69 aa		4.53	□□□□□ -1.68
RFA1	YAR007C	BEM2	P39960	2167 aa	Known RBP	4.53	□□□□□ -1.68
RFA1	YAR007C	YOR304C-A	O14468	76 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	YPS1	P32329	569 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	YNL092W	P53934	400 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	YPL080C	Q02826	108 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	YLR296W	Q05898	108 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	RAF1	Q06891	181 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	YDL218W	Q07629	317 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	DFM1	Q12743	341 aa	Known RBP	4.52	□□□□□ -1.69
RFA1	YAR007C	ISD11	Q6Q560	94 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	CYC3	P06182	269 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	PIS1	P06197	220 aa	Known RBP	4.52	□□□□□ -1.69
RFA1	YAR007C	MDM10	P18409	493 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	YMR31	P19955	123 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	ICS2	P38284	255 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	PGU1	P47180	361 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	SUT1	P53032	299 aa	Known RBP	4.52	□□□□□ -1.69
RFA1	YAR007C	SWS2	P53937	143 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	MIX17	Q03667	156 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	ATG33	Q06485	197 aa		4.52	□□□□□ -1.69
RFA1	YAR007C	YHR214C-D	P0CX93	97 aa		4.51	□□□□□ -1.69
RFA1	YAR007C	YCR023C	P25351	611 aa		4.51	□□□□□ -1.69
RFA1	YAR007C	APS1	P35181	156 aa		4.51	□□□□□ -1.69
RFA1	YAR007C	YKL044W	P36092	106 aa		4.51	□□□□□ -1.69
RFA1	YAR007C	ATX1	P38636	73 aa		4.51	□□□□□ -1.69
RFA1	YAR007C	PAU7	P39545	55 aa		4.51	□□□□□ -1.69
RFA1	YAR007C	MST28	P39552	234 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms