RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W CIN5P40917 295 aa1.22□□□□□ -2.21
SNC1YAL030W GEP7P53171 287 aa1.22□□□□□ -2.21
SNC1YAL030W ATP19P81451 68 aa1.22□□□□□ -2.21
SNC1YAL030W EST3Q03096 181 aa1.22□□□□□ -2.21
SNC1YAL030W ELP6Q04868 273 aa1.22□□□□□ -2.21
SNC1YAL030W RFU1Q08003 200 aa1.22□□□□□ -2.21
SNC1YAL030W SEN2P16658 377 aa1.21□□□□□ -2.22
SNC1YAL030W SUA7P29055 345 aaPredicted RBP1.21□□□□□ -2.22
SNC1YAL030W SUI1P32911 108 aaKnown RBP1.21□□□□□ -2.22
SNC1YAL030W GLC8P41818 229 aa1.21□□□□□ -2.22
SNC1YAL030W VMA10P48836 114 aaKnown RBP1.21□□□□□ -2.22
SNC1YAL030W UBC7Q02159 165 aa1.21□□□□□ -2.22
SNC1YAL030W NMA1Q06178 401 aaKnown RBP1.21□□□□□ -2.22
SNC1YAL030W YDL241WQ07738 123 aa1.21□□□□□ -2.22
SNC1YAL030W YFL065CP43539 102 aa1.2□□□□□ -2.22
SNC1YAL030W APS3P47064 194 aa1.2□□□□□ -2.22
SNC1YAL030W YGL230CP53074 147 aa1.2□□□□□ -2.22
SNC1YAL030W YGR017WP53210 297 aa1.2□□□□□ -2.22
SNC1YAL030W RCF2P53721 224 aa1.2□□□□□ -2.22
SNC1YAL030W YNL019CP53975 284 aa1.2□□□□□ -2.22
SNC1YAL030W DYN2Q02647 92 aa1.2□□□□□ -2.22
SNC1YAL030W MET31Q03081 177 aa1.2□□□□□ -2.22
SNC1YAL030W FMN1Q03778 218 aa1.2□□□□□ -2.22
SNC1YAL030W KEI1Q06346 221 aa1.2□□□□□ -2.22
SNC1YAL030W IRC19Q07843 230 aa1.2□□□□□ -2.22
SNC1YAL030W TAR1Q8TGM6 124 aa1.2□□□□□ -2.22
SNC1YAL030W ACC1Q00955 2233 aaKnown RBP1.19□□□□□ -2.22
SNC1YAL030W YGL041W-AP0C5N3 154 aa1.19□□□□□ -2.22
SNC1YAL030W YEL008WP40001 126 aa1.19□□□□□ -2.22
SNC1YAL030W CNL1Q06333 122 aa1.19□□□□□ -2.22
SNC1YAL030W SPC3Q12133 184 aa1.19□□□□□ -2.22
SNC1YAL030W RIB3Q99258 208 aa1.19□□□□□ -2.22
SNC1YAL030W CDC39P25655 2108 aaKnown RBP1.19□□□□□ -2.22
SNC1YAL030W FMP49A0A023PZB3 126 aa1.18□□□□□ -2.22
SNC1YAL030W RPL14AP36105 138 aaKnown RBP1.18□□□□□ -2.22
SNC1YAL030W YBR242WP38331 238 aa1.18□□□□□ -2.22
SNC1YAL030W PRS3P38689 320 aaKnown RBP1.18□□□□□ -2.22
SNC1YAL030W RPL14BP38754 138 aaKnown RBP1.18□□□□□ -2.22
SNC1YAL030W YHR140WP38842 239 aa1.18□□□□□ -2.22
SNC1YAL030W SPG1P50088 95 aa1.18□□□□□ -2.22
SNC1YAL030W YLR361C-AQ3E795 98 aa1.18□□□□□ -2.22
SNC1YAL030W COA3Q3E7B2 85 aa1.18□□□□□ -2.22
SNC1YAL030W SLH1P53327 1967 aaKnown RBP1.17□□□□□ -2.22
SNC1YAL030W HYM1P32464 399 aa1.17□□□□□ -2.22
SNC1YAL030W MRPL15P36523 253 aa1.17□□□□□ -2.22
SNC1YAL030W ECM31P38122 312 aa1.17□□□□□ -2.22
SNC1YAL030W LSM8P47093 109 aaKnown RBP1.17□□□□□ -2.22
SNC1YAL030W EMC4P53073 190 aa1.17□□□□□ -2.22
SNC1YAL030W TIM8P57744 87 aa1.17□□□□□ -2.22
SNC1YAL030W ELC1Q03071 99 aa1.17□□□□□ -2.22
SNC1YAL030W NKP2Q06162 153 aa1.17□□□□□ -2.22
SNC1YAL030W MYO2P19524 1574 aaKnown RBP1.17□□□□□ -2.22
SNC1YAL030W COX5BP00425 151 aa1.16□□□□□ -2.22
SNC1YAL030W KIN28P06242 306 aa1.16□□□□□ -2.22
SNC1YAL030W RPS1BP23248 255 aaKnown RBP1.16□□□□□ -2.22
SNC1YAL030W YCL042WP25572 119 aa1.16□□□□□ -2.22
SNC1YAL030W FYV5P25585 152 aa1.16□□□□□ -2.22
SNC1YAL030W MRP49P32388 137 aa1.16□□□□□ -2.22
SNC1YAL030W RPS20P38701 121 aaKnown RBP1.16□□□□□ -2.22
SNC1YAL030W YEL014CP39999 101 aa1.16□□□□□ -2.22
SNC1YAL030W DIE2P50076 525 aa1.16□□□□□ -2.22
SNC1YAL030W YCL001W-AP87012 153 aa1.16□□□□□ -2.22
SNC1YAL030W AVO2Q04749 426 aa1.16□□□□□ -2.22
SNC1YAL030W FCY1Q12178 158 aa1.16□□□□□ -2.22
SNC1YAL030W AQY2P0CD90 149 aa1.15□□□□□ -2.23
SNC1YAL030W NHP6AP11632 93 aaKnown RBP1.15□□□□□ -2.23
SNC1YAL030W PRE1P22141 198 aaKnown RBP1.15□□□□□ -2.23
SNC1YAL030W YKR070WP36151 352 aaKnown RBP1.15□□□□□ -2.23
SNC1YAL030W TRS20P38334 175 aa1.15□□□□□ -2.23
SNC1YAL030W HPM1P40481 377 aa1.15□□□□□ -2.23
SNC1YAL030W TVP18Q04767 167 aa1.15□□□□□ -2.23
SNC1YAL030W YDR278CQ05612 105 aa1.15□□□□□ -2.23
SNC1YAL030W SOM1Q05676 74 aa1.15□□□□□ -2.23
SNC1YAL030W YPR153WQ06537 140 aa1.15□□□□□ -2.23
SNC1YAL030W HUT1Q12520 339 aa1.15□□□□□ -2.23
SNC1YAL030W CMC4Q3E7A9 73 aa1.15□□□□□ -2.23
SNC1YAL030W YNL277W-AQ3E7Z0 62 aa1.15□□□□□ -2.23
SNC1YAL030W RAD50P12753 1312 aa1.15□□□□□ -2.23
SNC1YAL030W YCR050CP25630 102 aa1.14□□□□□ -2.23
SNC1YAL030W RPS1AP33442 255 aaKnown RBP1.14□□□□□ -2.23
SNC1YAL030W GPI11Q06636 219 aa1.14□□□□□ -2.23
SNC1YAL030W RAF1Q06891 181 aa1.14□□□□□ -2.23
SNC1YAL030W YPR203WQ08994 102 aa1.14□□□□□ -2.23
SNC1YAL030W MHF1Q3E835 90 aa1.14□□□□□ -2.23
SNC1YAL030W Q0144Q9ZZW2 109 aa1.14□□□□□ -2.23
SNC1YAL030W YRF1-3P0CX14 1859 aa1.14□□□□□ -2.23
SNC1YAL030W YRF1-7P0CX15 1859 aa1.14□□□□□ -2.23
SNC1YAL030W TY4B-JP47024 1803 aa1.13□□□□□ -2.23
SNC1YAL030W VAR1P02381 398 aa1.13□□□□□ -2.23
SNC1YAL030W HYP2P23301 157 aaKnown RBP1.13□□□□□ -2.23
SNC1YAL030W IPT1P38954 527 aa1.13□□□□□ -2.23
SNC1YAL030W YAL064WP39711 94 aa1.13□□□□□ -2.23
SNC1YAL030W TMA23Q03525 211 aa1.13□□□□□ -2.23
SNC1YAL030W SDH7Q04401 133 aa1.13□□□□□ -2.23
SNC1YAL030W FIT1Q04433 528 aa1.13□□□□□ -2.23
SNC1YAL030W NAT5Q08689 176 aa1.13□□□□□ -2.23
SNC1YAL030W YOR385WQ08909 290 aa1.13□□□□□ -2.23
SNC1YAL030W WIP1Q2V2P8 89 aa1.13□□□□□ -2.23
SNC1YAL030W SLO1Q3E784 85 aa1.13□□□□□ -2.23
SNC1YAL030W YHR212W-AP0CX91 67 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms