RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ADAMTS1Q9UHI8 967 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 VWA8A3KMH1 1905 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 PDE4DIPQ5VU43 2346 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 SSU72P8A0A1W2PR75 194 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 FAM170AA1A519 330 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 CCDC130P13994 396 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 ARPP19P56211 112 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 MAPK8IP2Q13387 824 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-230ENST00000641927 MTF1Q14872 753 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 CCDC142Q17RM4 750 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 INTS6LQ5JSJ4 861 aaKnown RBP18.57■□□□□ 0.56
PHGDH-230ENST00000641927 PPP2R2DQ66LE6 453 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 ZNF677Q86XU0 584 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 PASD1Q8IV76 773 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 DDX1Q92499 740 aaKnown RBP18.57■□□□□ 0.56
PHGDH-230ENST00000641927 TMEM209Q96SK2 561 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 PLVAPQ9BX97 442 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 CRTAC1Q9NQ79 661 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 CHST7Q9NS84 486 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 STK39Q9UEW8 545 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 GTF3C4Q9UKN8 822 aa18.57■□□□□ 0.56
PHGDH-230ENST00000641927 NLRC5Q86WI3 1866 aa18.56■□□□□ 0.56
PHGDH-230ENST00000641927 MYBPHLA2RUH7 354 aa18.56■□□□□ 0.56
PHGDH-230ENST00000641927 OR4Q2P0C623 313 aa18.56■□□□□ 0.56
PHGDH-230ENST00000641927 CHRNB2P17787 502 aa18.56■□□□□ 0.56
PHGDH-230ENST00000641927 ADORA2BP29275 332 aa18.56■□□□□ 0.56
PHGDH-230ENST00000641927 CYLC1P35663 651 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-230ENST00000641927 KIF11P52732 1056 aa18.56■□□□□ 0.56
PHGDH-230ENST00000641927 CYP27A1Q02318 531 aa18.56■□□□□ 0.56
PHGDH-230ENST00000641927 TAP1Q03518 808 aa18.56■□□□□ 0.56
PHGDH-230ENST00000641927 MRPL58Q14197 206 aaKnown RBP18.56■□□□□ 0.56
PHGDH-230ENST00000641927 PSMD5Q16401 504 aa18.56■□□□□ 0.56
PHGDH-230ENST00000641927 PPP1R26Q5T8A7 1209 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-230ENST00000641927 CYFIP2Q96F07 1278 aa18.56■□□□□ 0.56
PHGDH-230ENST00000641927 ZSWIM1Q9BR11 485 aa18.56■□□□□ 0.56
PHGDH-230ENST00000641927 MED10Q9BTT4 135 aa18.56■□□□□ 0.56
PHGDH-230ENST00000641927 C11orf84Q9BUA3 381 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-230ENST00000641927 CERS4Q9HA82 394 aa18.56■□□□□ 0.56
PHGDH-230ENST00000641927 SPTLC3Q9NUV7 552 aa18.56■□□□□ 0.56
PHGDH-230ENST00000641927 LAMA3Q16787 3333 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 OR6C75A6NL08 312 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 ARHGAP6O43182 974 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 CFHP08603 1231 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 FMO1Q01740 532 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 DSG1Q02413 1049 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 GFPT1Q06210 699 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-230ENST00000641927 GOLGA7BQ2TAP0 167 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 RAD9BQ6WBX8 426 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 CCDC170Q8IYT3 715 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 LNX1Q8TBB1 728 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-230ENST00000641927 MYCBPAPQ8TBZ2 947 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 SLC2A14Q8TDB8 520 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 AUTS2Q8WXX7 1259 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 PIK3R5Q8WYR1 880 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 SAMD11Q96NU1 681 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 SLC28A3Q9HAS3 691 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 MRPL17Q9NRX2 175 aaKnown RBP18.55■□□□□ 0.56
PHGDH-230ENST00000641927 TSPAN16Q9UKR8 245 aa18.55■□□□□ 0.56
PHGDH-230ENST00000641927 M0QYV0 167 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 O00370 1275 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 IPO7O95373 1038 aaKnown RBP18.54■□□□□ 0.56
PHGDH-230ENST00000641927 RB1P06400 928 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 CPB1P15086 417 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 BMS1Q14692 1282 aaKnown RBP18.54■□□□□ 0.56
PHGDH-230ENST00000641927 STILQ15468 1287 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 SLC39A12Q504Y0 691 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 TMC7Q7Z402 723 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 DCP1BQ8IZD4 617 aaKnown RBP18.54■□□□□ 0.56
PHGDH-230ENST00000641927 PCED1BQ96HM7 432 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 SYT11Q9BT88 431 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 HESX1Q9UBX0 185 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.54■□□□□ 0.56
PHGDH-230ENST00000641927 CEP83Q9Y592 693 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 CDY1Q9Y6F8 540 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 EPN1Q9Y6I3 576 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-230ENST00000641927 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.54■□□□□ 0.562e-6■■■■■ 31.1
PHGDH-230ENST00000641927 A0A087X0T9 212 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 TMCO5BA8MYB1 307 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 C5orf67F2Z3F1 127 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 CLDN5O00501 218 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 DDX3XO00571 662 aaKnown RBP eCLIP18.54■□□□□ 0.56
PHGDH-230ENST00000641927 MICAL2O94851 1124 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 NDUFA10O95299 355 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 FAM228BP0C875 321 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 RPL17P18621 184 aaKnown RBP18.54■□□□□ 0.56
PHGDH-230ENST00000641927 ANXA13P27216 316 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 ERVK-21P61565 698 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 MAPRE1Q15691 268 aaKnown RBP18.54■□□□□ 0.56
PHGDH-230ENST00000641927 CNGA2Q16280 664 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 LRRTM3Q86VH5 581 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 FBXO22Q8NEZ5 403 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 UBA3Q8TBC4 463 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 POF1BQ8WVV4 589 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 MYLPFQ96A32 169 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 TCF25Q9BQ70 676 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 OXCT2Q9BYC2 517 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-230ENST00000641927 ZCWPW1Q9H0M4 648 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 ENTPD7Q9NQZ7 604 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 MTRRQ9UBK8 725 aa18.54■□□□□ 0.56
PHGDH-230ENST00000641927 SPA17Q15506 151 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms