RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 XKR4Q5GH76 650 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 L1TD1Q5T7N2 865 aaKnown RBP8.03□□□□□ -1.12
PHGDH-225ENST00000641720 ATF7IP2Q5U623 682 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.03□□□□□ -1.12
PHGDH-225ENST00000641720 KBTBD6Q86V97 674 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 MFSD6LQ8IWD5 586 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 TCEAL8Q8IYN2 117 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 BEST2Q8NFU1 509 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 SMARCD2Q92925 531 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 IRF7Q92985 503 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 HVCN1Q96D96 273 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 LOXL4Q96JB6 756 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 ZBTB45Q96K62 511 aaPredicted RBP8.03□□□□□ -1.12
PHGDH-225ENST00000641720 ZC3H10Q96K80 434 aaKnown RBP8.03□□□□□ -1.12
PHGDH-225ENST00000641720 ACO2Q99798 780 aaKnown RBP8.03□□□□□ -1.12
PHGDH-225ENST00000641720 TRMT61BQ9BVS5 477 aaKnown RBP8.03□□□□□ -1.12
PHGDH-225ENST00000641720 CDT1Q9H211 546 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 ARRDC1-AS1Q9H2J1 176 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 CRISPLD1Q9H336 500 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 BRD9Q9H8M2 597 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 GOLGA2P5Q9HBQ8 144 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 ZFP14Q9HCL3 533 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 PTPRHQ9HD43 1115 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 SNTG2Q9NY99 539 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 ANKFY1Q9P2R3 1169 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 MAN1B1Q9UKM7 699 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 RAB23Q9ULC3 237 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 POLIQ9UNA4 740 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 INSL5Q9Y5Q6 135 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 URB1O60287 2271 aaKnown RBP8.03□□□□□ -1.12
PHGDH-225ENST00000641720 H0YCG3 227 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 BIN1O00499 593 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 HNRNPDLO14979 420 aaKnown RBP8.02□□□□□ -1.13
PHGDH-225ENST00000641720 N4BP3O15049 544 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 EIF3DO15371 548 aaKnown RBP eCLIP8.02□□□□□ -1.13
PHGDH-225ENST00000641720 EXTL3O43909 919 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 FAM189A1O60320 539 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 FOXD2O60548 495 aaPredicted RBP8.02□□□□□ -1.13
PHGDH-225ENST00000641720 MBD3O95983 291 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 ATF2P15336 505 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 GJA1P17302 382 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 PTPN2P17706 415 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 BMP6P22004 513 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 CTHP32929 405 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 LIG4P49917 911 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 RING1Q06587 406 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 ELAVL2Q12926 359 aaKnown RBP8.02□□□□□ -1.13
PHGDH-225ENST00000641720 STRN3Q13033 797 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 ALCAMQ13740 583 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 KCNB1Q14721 858 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 BMT2Q1RMZ1 405 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 ZNF568Q3ZCX4 644 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 STXBP5Q5T5C0 1151 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 TCEAL6Q6IPX3 200 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 ALKAL1Q6UXT8 129 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 ZPBP2Q6X784 338 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 CEP57Q86XR8 500 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 NELFCDQ8IXH7 590 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 ELOA2Q8IYF1 753 aaPredicted RBP8.02□□□□□ -1.13
PHGDH-225ENST00000641720 CEP120Q8N960 986 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 ZSWIM2Q8NEG5 633 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 ZNF461Q8TAF7 563 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 SHKBP1Q8TBC3 707 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 DEPDC1BQ8WUY9 529 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 GAB3Q8WWW8 586 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 EZH1Q92800 747 aaPredicted RBP8.02□□□□□ -1.13
PHGDH-225ENST00000641720 TCEAL3Q969E4 200 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 SMARCE1Q969G3 411 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 BICD1Q96G01 975 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 ADAM33Q9BZ11 813 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 NUP62CLQ9H1M0 184 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 DNAJC25Q9H1X3 360 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 POLR3BQ9NW08 1133 aaPredicted RBP8.02□□□□□ -1.13
PHGDH-225ENST00000641720 TNFSF13BQ9Y275 285 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 UBE4BO95155 1302 aa8.02□□□□□ -1.13
PHGDH-225ENST00000641720 MYLKQ15746 1914 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 BSNQ9UPA5 3926 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 CCDC163A0A0D9SF12 145 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 HEPACAM2A8MVW5 462 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 SPECC1L-ADORA2AF8WAN1 911 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 CHADO15335 359 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 TGFB1I1O43294 461 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 TOM1L1O75674 476 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 SMC2O95347 1197 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 THP07101 528 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 CHRM1P11229 460 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-225ENST00000641720 SCP2P22307 547 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 ADSSP30520 456 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 CLCNKBP51801 687 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 MCL1Q07820 350 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 MORC3Q14149 939 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 NOLC1Q14978 699 aaKnown RBP eCLIP8.01□□□□□ -1.13
PHGDH-225ENST00000641720 DCAF4L1Q3SXM0 396 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 PLK5Q496M5 336 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 SEZ6Q53EL9 994 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 HEATR6Q6AI08 1181 aaKnown RBP8.01□□□□□ -1.13
PHGDH-225ENST00000641720 ISM2Q6H9L7 571 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 PSAPL1Q6NUJ1 521 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 PDXDC1Q6P996 788 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 LRSAM1Q6UWE0 723 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms