RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	ADCK1	Q86TW2	530 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	ALYREF	Q86V81	257 aa	Known RBP	11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	KBTBD2	Q8IY47	623 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	BORCS6	Q96GS4	357 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	NT5C1B	Q96P26	610 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	PKD2L2	Q9NZM6	624 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	FBXO9	Q9UK97	447 aa	Predicted RBP	11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	SNX5	Q9Y5X3	404 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	ADGRA3	Q8IWK6	1321 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895		A0A0A6YYK5	440 aa	Predicted RBP	11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895		M0R3G1	203 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	FOXP2	O15409	715 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	APOA1	P02647	267 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	RALA	P11233	206 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	ADAM17	P78536	824 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	CHADL	Q6NUI6	762 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	NUP93	Q8N1F7	819 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	SUN5	Q8TC36	379 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	SDCCAG3	Q96C92	435 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	NAP1L4	Q99733	375 aa	Known RBP	11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	MXD3	Q9BW11	206 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	OSBPL10	Q9BXB5	764 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	PCDH12	Q9NPG4	1184 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	PIK3C2A	O00443	1686 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	RPTOR	Q8N122	1335 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	SYCE1L	A8MT33	242 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	FBP2	O00757	339 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	KLRC4	O43908	158 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	RNASEH1	O60930	286 aa	Known RBP	11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	KCNA4	P22459	653 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	HIBADH	P31937	336 aa	Known RBP	11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	MARCKSL1	P49006	195 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	WDR72	Q3MJ13	1102 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	KLHL35	Q6PF15	583 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	FLCN	Q8NFG4	579 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	ZC3H15	Q8WU90	426 aa	Known RBP	11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	RSPH1	Q8WYR4	309 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	SKA1	Q96BD8	255 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	ANKRD36BP1	Q96IX9	119 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	NUDT12	Q9BQG2	462 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	MMTAG2	Q9BU76	263 aa	Known RBP	11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	TRIM39	Q9HCM9	518 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	CAB39	Q9Y376	341 aa	Predicted RBP	11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	PCP4L1	A6NKN8	68 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	PABPC4L	P0CB38	370 aa	Known RBP	11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	HSPA8	P11142	646 aa	Known RBP	11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	FDFT1	P37268	417 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	ZYX	Q15942	572 aa	Known RBP	11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	UBE2S	Q16763	222 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	ASRGL1	Q7L266	308 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	ALG3	Q92685	438 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	OSBPL6	Q9BZF3	934 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	RNPEP	Q9H4A4	650 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	FAM208A	Q9UK61	1670 aa	Known RBP	11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	MYO3B	Q8WXR4	1341 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895		K7ENM7	598 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	DLG1	Q12959	904 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	PKN1	Q16512	942 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	LRRC8E	Q6NSJ5	796 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	RAPH1	Q70E73	1250 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	TTC7B	Q86TV6	843 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	TREML1	Q86YW5	311 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	DCLK2	Q8N568	766 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	CDKL2	Q92772	493 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	ARHGEF26	Q96DR7	871 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	CALN1	Q9BXU9	219 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	PSTPIP2	Q9H939	334 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	PPM1H	Q9ULR3	514 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	USP17L3	A6NCW0	530 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	USP17L4	A6NCW7	530 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	TRIM49D1	C9J1S8	452 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895		H3BSA7	217 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	ARHGEF9	O43307	516 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	POR	P16435	677 aa	Predicted RBP	11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	CASP7	P55210	303 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	USP17L1	Q7RTZ2	530 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	RFX6	Q8HWS3	928 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	DEPDC1B	Q8WUY9	529 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	PAFAH2	Q99487	392 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	NYX	Q9GZU5	481 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	VPS11	Q9H270	941 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	KIAA1586	Q9HCI6	787 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	S100A14	Q9HCY8	104 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	GIN1	Q9NXP7	522 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	DSE	Q9UL01	958 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	FMN2	Q9NZ56	1722 aa		11.84	□□□□□ -0.51
SPIN3-231	ENST00000639895	MEGF6	O75095	1541 aa		11.83	□□□□□ -0.52
SPIN3-231	ENST00000639895	ERVV-1	B6SEH8	477 aa		11.83	□□□□□ -0.52
SPIN3-231	ENST00000639895	LDHB	P07195	334 aa	Known RBP	11.83	□□□□□ -0.52
SPIN3-231	ENST00000639895	ENTPD1	P49961	510 aa		11.83	□□□□□ -0.52
SPIN3-231	ENST00000639895	SLC1A5	Q15758	541 aa		11.83	□□□□□ -0.52
SPIN3-231	ENST00000639895	TBCC	Q15814	346 aa		11.83	□□□□□ -0.52
SPIN3-231	ENST00000639895	JADE1	Q6IE81	842 aa		11.83	□□□□□ -0.52
SPIN3-231	ENST00000639895	NDUFAF2	Q8N183	169 aa		11.83	□□□□□ -0.52
SPIN3-231	ENST00000639895	GLIS3	Q8NEA6	775 aa		11.83	□□□□□ -0.52
SPIN3-231	ENST00000639895	DEPTOR	Q8TB45	409 aa		11.83	□□□□□ -0.52
SPIN3-231	ENST00000639895	C11orf70	Q9BRQ4	267 aa		11.83	□□□□□ -0.52
SPIN3-231	ENST00000639895	PLA2G12B	Q9BX93	195 aa		11.83	□□□□□ -0.52
SPIN3-231	ENST00000639895	FAM96A	Q9H5X1	160 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms