RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 PCIF1Q9H4Z3 704 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 PDE11AQ9HCR9 933 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 DDX43Q9NXZ2 648 aaKnown RBP18.14■□□□□ 0.49
SMN2-216ENST00000638794 DLL3Q9NYJ7 618 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 ITGA11Q9UKX5 1188 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 STX6O43752 255 aa18.13■□□□□ 0.49
SMN2-216ENST00000638794 HUS1O60921 280 aa18.13■□□□□ 0.49
SMN2-216ENST00000638794 PRPF40AO75400 957 aaKnown RBP18.13■□□□□ 0.49
SMN2-216ENST00000638794 ACAT1P24752 427 aaKnown RBP18.13■□□□□ 0.49
SMN2-216ENST00000638794 NASPP49321 788 aaPredicted RBP18.13■□□□□ 0.49
SMN2-216ENST00000638794 NLRP12P59046 1061 aa18.13■□□□□ 0.49
SMN2-216ENST00000638794 BFSP1Q12934 665 aa18.13■□□□□ 0.49
SMN2-216ENST00000638794 PON2Q15165 354 aa18.13■□□□□ 0.49
SMN2-216ENST00000638794 RSPO4Q2I0M5 234 aaPredicted RBP18.13■□□□□ 0.49
SMN2-216ENST00000638794 SDHAF4Q5VUM1 108 aa18.13■□□□□ 0.49
SMN2-216ENST00000638794 CSGALNACT2Q8N6G5 542 aa18.13■□□□□ 0.49
SMN2-216ENST00000638794 CELF5Q8N6W0 485 aaKnown RBP18.13■□□□□ 0.49
SMN2-216ENST00000638794 MAB21L3Q8N8X9 362 aa18.13■□□□□ 0.49
SMN2-216ENST00000638794 GLIS3Q8NEA6 775 aa18.13■□□□□ 0.49
SMN2-216ENST00000638794 LEO1Q8WVC0 666 aaPredicted RBP18.13■□□□□ 0.49
SMN2-216ENST00000638794 ACBD6Q9BR61 282 aa18.13■□□□□ 0.49
SMN2-216ENST00000638794 ZSCAN16Q9H4T2 348 aaPredicted RBP18.13■□□□□ 0.49
SMN2-216ENST00000638794 TMEM206Q9H813 350 aa18.13■□□□□ 0.49
SMN2-216ENST00000638794 SIX4Q9UIU6 781 aa18.13■□□□□ 0.49
SMN2-216ENST00000638794 ZMYM5Q9UJ78 669 aa18.13■□□□□ 0.49
SMN2-216ENST00000638794 CCL26Q9Y258 94 aa18.13■□□□□ 0.49
SMN2-216ENST00000638794 F11P03951 625 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 KRT19P08727 400 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 AVPR1AP37288 418 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 MYL7Q01449 175 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 DMWDQ09019 674 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 CCINQ13939 588 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 LPAL2Q16609 132 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 CCDC142Q17RM4 750 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 INTS6LQ5JSJ4 861 aaKnown RBP18.12■□□□□ 0.49
SMN2-216ENST00000638794 DGKKQ5KSL6 1271 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 LMBRD2Q68DH5 695 aaPredicted RBP18.12■□□□□ 0.49
SMN2-216ENST00000638794 OSTM1Q86WC4 334 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 CCDC65Q8IXS2 484 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 TMEM86AQ8N2M4 240 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 GPD1LQ8N335 351 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 GPR161Q8N6U8 529 aaKnown RBP18.12■□□□□ 0.49
SMN2-216ENST00000638794 HPS3Q969F9 1004 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 PKMYT1Q99640 499 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 C2orf42Q9NWW7 574 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 THG1LQ9NWX6 298 aaKnown RBP18.12■□□□□ 0.49
SMN2-216ENST00000638794 GDAP2Q9NXN4 497 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 MAGED2Q9UNF1 606 aaPredicted RBP18.12■□□□□ 0.49
SMN2-216ENST00000638794 SNX9Q9Y5X1 595 aa18.12■□□□□ 0.49
SMN2-216ENST00000638794 NCOR2Q9Y618 2525 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 MED19A0JLT2 244 aaPredicted RBP18.11■□□□□ 0.49
SMN2-216ENST00000638794 HCRTO43612 131 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 PAPSS2O95340 614 aaPredicted RBP18.11■□□□□ 0.49
SMN2-216ENST00000638794 TMEM191BP0C7N4 346 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 CSH1P0DML2 217 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 CSH2P0DML3 217 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 CYP2F1P24903 491 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 DDX6P26196 483 aaKnown RBP eCLIP18.11■□□□□ 0.49
SMN2-216ENST00000638794 RBP5P82980 135 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 STK38Q15208 465 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 DDR2Q16832 855 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 ITPRIPL2Q3MIP1 535 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 TXNDC8Q6A555 127 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 TOP6BLQ8N6T0 577 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 LINC00301Q8NCQ3 95 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 USP13Q92995 863 aaPredicted RBP18.11■□□□□ 0.49
SMN2-216ENST00000638794 FAM83CQ9BQN1 747 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 TNMDQ9H2S6 317 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 ABCB6Q9NP58 842 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 GKN1Q9NS71 199 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 GMEB2Q9UKD1 530 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 GTF3C4Q9UKN8 822 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 RAB23Q9ULC3 237 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 PTPRJQ12913 1337 aa18.11■□□□□ 0.49
SMN2-216ENST00000638794 GREB1Q4ZG55 1949 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 ANAPC1Q9H1A4 1944 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 CHURC1-FNTBB4DL54 471 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 K7ELQ4 463 aaPredicted RBP18.1■□□□□ 0.49
SMN2-216ENST00000638794 K7ESF4 209 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 TADA3O75528 432 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 TGM1P22735 817 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 FNTBP49356 437 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 E2F4Q16254 413 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 TRIM68Q6AZZ1 485 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 PRR23BQ6ZRT6 265 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 CBWD2Q8IUF1 395 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 ADGRF2Q8IZF7 708 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 SPATA18Q8TC71 538 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 MRPS31Q92665 395 aaKnown RBP18.1■□□□□ 0.49
SMN2-216ENST00000638794 PARD6AQ9NPB6 346 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 HPS4Q9NQG7 708 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 INTS13Q9NVM9 706 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 USP18Q9UMW8 372 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 ATG2BQ96BY7 2078 aa18.1■□□□□ 0.49
SMN2-216ENST00000638794 OTOL1A6NHN0 477 aaPredicted RBP18.09■□□□□ 0.49
SMN2-216ENST00000638794 GABRDO14764 452 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 KIAA0391O15091 583 aaKnown RBP18.09■□□□□ 0.49
SMN2-216ENST00000638794 SPTLC2O15270 562 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 NOL4O94818 638 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 HOXC13P31276 330 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms