RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 MGAT5BQ3V5L5 792 aa23.29■■□□□ 1.32
SCN1B-206ENST00000638536 ING5Q8WYH8 240 aa23.29■■□□□ 1.32
SCN1B-206ENST00000638536 RWDD2AQ9UIY3 292 aa23.29■■□□□ 1.32
SCN1B-206ENST00000638536 TECTAO75443 2155 aa23.29■■□□□ 1.32
SCN1B-206ENST00000638536 GREB1Q4ZG55 1949 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 HAPLN1P10915 354 aaPredicted RBP23.28■■□□□ 1.32
SCN1B-206ENST00000638536 CYP2F1P24903 491 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 PCSK1P29120 753 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 CCDC40Q4G0X9 1142 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 SDHAF4Q5VUM1 108 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 OTOP3Q7RTS5 596 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 FRMD5Q7Z6J6 570 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 ZDHHC14Q8IZN3 488 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 MLKLQ8NB16 471 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 SPPL2BQ8TCT7 592 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 LRRC3Q9BY71 257 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 SNX25Q9H3E2 840 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 SMOC2Q9H3U7 446 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 HMGXB4Q9UGU5 601 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 CDH9Q9ULB4 789 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 PCDHB5Q9Y5E4 795 aa23.28■■□□□ 1.32
SCN1B-206ENST00000638536 NLRP12P59046 1061 aa23.27■■□□□ 1.32
SCN1B-206ENST00000638536 NOP14P78316 857 aaKnown RBP23.27■■□□□ 1.32
SCN1B-206ENST00000638536 ORC1Q13415 861 aa23.27■■□□□ 1.32
SCN1B-206ENST00000638536 PRSS36Q5K4E3 855 aa23.27■■□□□ 1.32
SCN1B-206ENST00000638536 RBM43Q6ZSC3 357 aaKnown RBP23.27■■□□□ 1.32
SCN1B-206ENST00000638536 GIPC2Q8TF65 315 aa23.27■■□□□ 1.32
SCN1B-206ENST00000638536 TAF4BQ92750 862 aa23.27■■□□□ 1.32
SCN1B-206ENST00000638536 FGF13Q92913 245 aa23.27■■□□□ 1.32
SCN1B-206ENST00000638536 ZNF512Q96ME7 567 aaPredicted RBP23.27■■□□□ 1.32
SCN1B-206ENST00000638536 HSFX1Q9UBD0 423 aa23.27■■□□□ 1.32
SCN1B-206ENST00000638536 MYH10P35580 1976 aa23.27■■□□□ 1.32
SCN1B-206ENST00000638536 A8MXQ7 604 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 MOSPD3O75425 235 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 FAM163BP0C2L3 166 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 GJA1P17302 382 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 ALDH1A3P47895 512 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 MDH1BQ5I0G3 518 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 TMC8Q8IU68 726 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 FBXL13Q8NEE6 735 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 C2orf15Q8WU43 125 aaKnown RBP23.26■■□□□ 1.31
SCN1B-206ENST00000638536 RSAD2Q8WXG1 361 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 MYLPFQ96A32 169 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 ACSF2Q96CM8 615 aaPredicted RBP23.26■■□□□ 1.31
SCN1B-206ENST00000638536 METTL14Q9HCE5 456 aaKnown RBP23.26■■□□□ 1.31
SCN1B-206ENST00000638536 ZNF334Q9HCZ1 680 aaPredicted RBP23.26■■□□□ 1.31
SCN1B-206ENST00000638536 RAB20Q9NX57 234 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 DENND4CQ5VZ89 1909 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 LAMP2P13473 410 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 CEBPBP17676 345 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 TUFMP49411 452 aaKnown RBP23.26■■□□□ 1.31
SCN1B-206ENST00000638536 SMARCB1Q12824 385 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 NFE2Q16621 373 aaPredicted RBP23.26■■□□□ 1.31
SCN1B-206ENST00000638536 DDR2Q16832 855 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 DNAJB7Q7Z6W7 309 aaPredicted RBP23.26■■□□□ 1.31
SCN1B-206ENST00000638536 IRF2BP1Q8IU81 584 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 TATDN2Q93075 761 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 PCED1BQ96HM7 432 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 BCO2Q9BYV7 579 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 COQ4Q9Y3A0 265 aa23.26■■□□□ 1.31
SCN1B-206ENST00000638536 MRPS23Q9Y3D9 190 aaKnown RBP23.26■■□□□ 1.31
SCN1B-206ENST00000638536 PI4K2BG5E9Z4 385 aa23.25■■□□□ 1.31
SCN1B-206ENST00000638536 PTPN1P18031 435 aaKnown RBP23.25■■□□□ 1.31
SCN1B-206ENST00000638536 EPHB3P54753 998 aa23.25■■□□□ 1.31
SCN1B-206ENST00000638536 TRIM59Q8IWR1 403 aa23.25■■□□□ 1.31
SCN1B-206ENST00000638536 NPAS3Q8IXF0 933 aa23.25■■□□□ 1.31
SCN1B-206ENST00000638536 ELMOD1Q8N336 334 aa23.25■■□□□ 1.31
SCN1B-206ENST00000638536 AVENQ9NQS1 362 aaPredicted RBP23.25■■□□□ 1.31
SCN1B-206ENST00000638536 TMEM30AQ9NV96 361 aa23.25■■□□□ 1.31
SCN1B-206ENST00000638536 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.25■■□□□ 1.31
SCN1B-206ENST00000638536 TMEM63CQ9P1W3 806 aa23.25■■□□□ 1.31
SCN1B-206ENST00000638536 EPS15L1Q9UBC2 864 aa23.25■■□□□ 1.31
SCN1B-206ENST00000638536 ZNF638Q14966 1978 aaKnown RBP23.24■■□□□ 1.31
SCN1B-206ENST00000638536 STX10O60499 249 aa23.24■■□□□ 1.31
SCN1B-206ENST00000638536 MYL4P12829 197 aa23.24■■□□□ 1.31
SCN1B-206ENST00000638536 FMO5P49326 533 aa23.24■■□□□ 1.31
SCN1B-206ENST00000638536 EPHA5P54756 1037 aa23.24■■□□□ 1.31
SCN1B-206ENST00000638536 MARSP56192 900 aaKnown RBP23.24■■□□□ 1.31
SCN1B-206ENST00000638536 IQCEQ6IPM2 695 aa23.24■■□□□ 1.31
SCN1B-206ENST00000638536 SPATA2LQ8IUW3 424 aaPredicted RBP23.24■■□□□ 1.31
SCN1B-206ENST00000638536 PLCD3Q8N3E9 789 aa23.24■■□□□ 1.31
SCN1B-206ENST00000638536 MYCBPAPQ8TBZ2 947 aa23.24■■□□□ 1.31
SCN1B-206ENST00000638536 PSMG2Q969U7 264 aa23.24■■□□□ 1.31
SCN1B-206ENST00000638536 TWNKQ96RR1 684 aa23.24■■□□□ 1.31
SCN1B-206ENST00000638536 ARID3AQ99856 593 aa23.24■■□□□ 1.31
SCN1B-206ENST00000638536 CDH7Q9ULB5 785 aa23.24■■□□□ 1.31
SCN1B-206ENST00000638536 OBSL1O75147 1896 aa23.24■■□□□ 1.31
SCN1B-206ENST00000638536 CLDN5O00501 218 aa23.23■■□□□ 1.31
SCN1B-206ENST00000638536 DCXO43602 365 aa23.23■■□□□ 1.31
SCN1B-206ENST00000638536 BDNFP23560 247 aa23.23■■□□□ 1.31
SCN1B-206ENST00000638536 NDST1P52848 882 aa23.23■■□□□ 1.31
SCN1B-206ENST00000638536 CYP27A1Q02318 531 aa23.23■■□□□ 1.31
SCN1B-206ENST00000638536 PLD1Q13393 1074 aa23.23■■□□□ 1.31
SCN1B-206ENST00000638536 MTMR3Q13615 1198 aa23.23■■□□□ 1.31
SCN1B-206ENST00000638536 CFAP221Q4G0U5 840 aa23.23■■□□□ 1.31
SCN1B-206ENST00000638536 PDZD4Q76G19 769 aaPredicted RBP23.23■■□□□ 1.31
SCN1B-206ENST00000638536 B3GALNT2Q8NCR0 500 aa23.23■■□□□ 1.31
SCN1B-206ENST00000638536 MCRS1Q96EZ8 462 aa23.23■■□□□ 1.31
SCN1B-206ENST00000638536 RPP25Q9BUL9 199 aaKnown RBP23.23■■□□□ 1.31
SCN1B-206ENST00000638536 IMPG2Q9BZV3 1241 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms